RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 MSRAQ9UJ68 235 aa13.86□□□□□ -0.19
MED28-203ENST00000503945 TTC28Q96AY4 2481 aa13.86□□□□□ -0.19
MED28-203ENST00000503945 B4GALT4O60513 344 aa13.85□□□□□ -0.19
MED28-203ENST00000503945 MYCLP12524 364 aaPredicted RBP13.85□□□□□ -0.19
MED28-203ENST00000503945 EIF2AK2P19525 551 aaKnown RBP13.85□□□□□ -0.19
MED28-203ENST00000503945 CASTP20810 708 aaKnown RBP13.85□□□□□ -0.19
MED28-203ENST00000503945 HSD17B4P51659 736 aa13.85□□□□□ -0.19
MED28-203ENST00000503945 CHMP4BP1P59074 171 aa13.85□□□□□ -0.19
MED28-203ENST00000503945 NBPF20Q3BBV1 942 aa13.85□□□□□ -0.19
MED28-203ENST00000503945 FAM47CQ5HY64 1035 aa13.85□□□□□ -0.19
MED28-203ENST00000503945 NFRKBQ6P4R8 1299 aa13.85□□□□□ -0.19
MED28-203ENST00000503945 KCNV1Q6PIU1 500 aa13.85□□□□□ -0.19
MED28-203ENST00000503945 OTOP2Q7RTS6 562 aa13.85□□□□□ -0.19
MED28-203ENST00000503945 MB21D2Q8IYB1 491 aaPredicted RBP13.85□□□□□ -0.19
MED28-203ENST00000503945 CTCFLQ8NI51 663 aaPredicted RBP13.85□□□□□ -0.19
MED28-203ENST00000503945 MAP3K14Q99558 947 aa13.85□□□□□ -0.19
MED28-203ENST00000503945 LZTS2Q9BRK4 669 aa13.85□□□□□ -0.19
MED28-203ENST00000503945 ESYT1Q9BSJ8 1104 aa13.85□□□□□ -0.19
MED28-203ENST00000503945 NOC4LQ9BVI4 516 aaKnown RBP13.85□□□□□ -0.19
MED28-203ENST00000503945 LSG1Q9H089 658 aaKnown RBP13.85□□□□□ -0.19
MED28-203ENST00000503945 ANO2Q9NQ90 1003 aa13.85□□□□□ -0.19
MED28-203ENST00000503945 PXMP2Q9NR77 195 aa13.85□□□□□ -0.19
MED28-203ENST00000503945 DDX41Q9UJV9 622 aaKnown RBP13.85□□□□□ -0.19
MED28-203ENST00000503945 YBX2Q9Y2T7 364 aaKnown RBP13.85□□□□□ -0.19
MED28-203ENST00000503945 TAF6LQ9Y6J9 622 aa13.85□□□□□ -0.19
MED28-203ENST00000503945 CHD9Q3L8U1 2897 aa13.85□□□□□ -0.19
MED28-203ENST00000503945 TCF20Q9UGU0 1960 aaKnown RBP13.84□□□□□ -0.19
MED28-203ENST00000503945 CCDC69A6NI79 296 aa13.84□□□□□ -0.19
MED28-203ENST00000503945 TNFRSF10AO00220 468 aa13.84□□□□□ -0.19
MED28-203ENST00000503945 PPP1R11O60927 126 aaPredicted RBP13.84□□□□□ -0.19
MED28-203ENST00000503945 IGFBP4P22692 258 aa13.84□□□□□ -0.19
MED28-203ENST00000503945 SMARCA1P28370 1054 aa13.84□□□□□ -0.19
MED28-203ENST00000503945 HOXA13P31271 388 aaPredicted RBP13.84□□□□□ -0.19
MED28-203ENST00000503945 GNAQP50148 359 aa13.84□□□□□ -0.19
MED28-203ENST00000503945 RABGGTBP53611 331 aa13.84□□□□□ -0.19
MED28-203ENST00000503945 PTPN11Q06124 597 aaPredicted RBP13.84□□□□□ -0.19
MED28-203ENST00000503945 LAMC2Q13753 1193 aa13.84□□□□□ -0.19
MED28-203ENST00000503945 NECTIN1Q15223 517 aa13.84□□□□□ -0.19
MED28-203ENST00000503945 RAB30Q15771 203 aa13.84□□□□□ -0.19
MED28-203ENST00000503945 RNF20Q5VTR2 975 aa13.84□□□□□ -0.19
MED28-203ENST00000503945 VSIG10LQ86VR7 867 aa13.84□□□□□ -0.19
MED28-203ENST00000503945 FCHSD1Q86WN1 690 aa13.84□□□□□ -0.19
MED28-203ENST00000503945 RETREG2Q8NC44 543 aa13.84□□□□□ -0.19
MED28-203ENST00000503945 AFG1LQ8WV93 481 aa13.84□□□□□ -0.19
MED28-203ENST00000503945 VWCEQ96DN2 955 aa13.84□□□□□ -0.19
MED28-203ENST00000503945 TMEM87BQ96K49 555 aa13.84□□□□□ -0.19
MED28-203ENST00000503945 MTIF3Q9H2K0 278 aaKnown RBP13.84□□□□□ -0.19
MED28-203ENST00000503945 TRMT13Q9NUP7 481 aaKnown RBP13.84□□□□□ -0.19
MED28-203ENST00000503945 MRVI1Q9Y6F6 885 aa13.84□□□□□ -0.19
MED28-203ENST00000503945 LRRC37A2A6NM11 1700 aa13.84□□□□□ -0.19
MED28-203ENST00000503945 SCN5AQ14524 2016 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 OPLAHO14841 1288 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 SLC27A2O14975 620 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 PRC1O43663 620 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 CYTH3O43739 400 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 ARIH2O95376 493 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 CALM1P0DP23 149 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 CALM2P0DP24 149 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 CALM3P0DP25 149 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 TGFB3P10600 412 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 ANTXR2P58335 489 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 GHRHRQ02643 423 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 DGKDQ16760 1214 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 BMP2KLQ5H9B9 411 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 CREB3L3Q68CJ9 461 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 SYNE3Q6ZMZ3 975 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 DHX37Q8IY37 1157 aaKnown RBP13.83□□□□□ -0.2
MED28-203ENST00000503945 ZNF654Q8IZM8 581 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 ATXN2LQ8WWM7 1075 aaKnown RBP13.83□□□□□ -0.2
MED28-203ENST00000503945 PIBF1Q8WXW3 757 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 RRP36Q96EU6 259 aaKnown RBP13.83□□□□□ -0.2
MED28-203ENST00000503945 SCLYQ96I15 445 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 ASB2Q96Q27 587 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 WNT8AQ9H1J5 351 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 SLC28A3Q9HAS3 691 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 LY9Q9HBG7 655 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 NOD1Q9Y239 953 aa13.83□□□□□ -0.2
MED28-203ENST00000503945 PPFIA4O75335 1185 aa13.82□□□□□ -0.2
MED28-203ENST00000503945 DDAH1O94760 285 aa13.82□□□□□ -0.2
MED28-203ENST00000503945 CYP2C9P11712 490 aa13.82□□□□□ -0.2
MED28-203ENST00000503945 MYOGP15173 224 aa13.82□□□□□ -0.2
MED28-203ENST00000503945 LIFRP42702 1097 aa13.82□□□□□ -0.2
MED28-203ENST00000503945 CUL5Q93034 780 aa13.82□□□□□ -0.2
MED28-203ENST00000503945 PDCD2LQ9BRP1 358 aa13.82□□□□□ -0.2
MED28-203ENST00000503945 SEC63Q9UGP8 760 aaKnown RBP13.82□□□□□ -0.2
MED28-203ENST00000503945 SLC12A7Q9Y666 1083 aa13.82□□□□□ -0.2
MED28-203ENST00000503945 MMP3P08254 477 aa13.81□□□□□ -0.2
MED28-203ENST00000503945 CCND2P30279 289 aa13.81□□□□□ -0.2
MED28-203ENST00000503945 ARHGAP1Q07960 439 aa13.81□□□□□ -0.2
MED28-203ENST00000503945 PGM5Q15124 567 aa13.81□□□□□ -0.2
MED28-203ENST00000503945 SLC35G1Q2M3R5 365 aa13.81□□□□□ -0.2
MED28-203ENST00000503945 EMID1Q96A84 441 aaPredicted RBP13.81□□□□□ -0.2
MED28-203ENST00000503945 MYL10Q9BUA6 226 aa13.81□□□□□ -0.2
MED28-203ENST00000503945 THEGQ9P2T0 379 aa13.81□□□□□ -0.2
MED28-203ENST00000503945 SLC4A7Q9Y6M7 1214 aa13.81□□□□□ -0.2
MED28-203ENST00000503945 TRIP12Q14669 1992 aaPredicted RBP13.8□□□□□ -0.2
MED28-203ENST00000503945 MRPS5P82675 430 aaKnown RBP13.8□□□□□ -0.2
MED28-203ENST00000503945 MAPK8IP2Q13387 824 aaPredicted RBP13.8□□□□□ -0.2
MED28-203ENST00000503945 BFSP2Q13515 415 aa13.8□□□□□ -0.2
MED28-203ENST00000503945 PTGISQ16647 500 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms