RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 MRPS9P82933 396 aaKnown RBP28.77■■■□□ 2.2
LSM6-202ENST00000502781 SCFD2Q8WU76 684 aa28.77■■■□□ 2.2
LSM6-202ENST00000502781 STAM2O75886 525 aa28.76■■■□□ 2.2
LSM6-202ENST00000502781 NLRP5P59047 1200 aa28.76■■■□□ 2.2
LSM6-202ENST00000502781 NKX3-2P78367 333 aa28.76■■■□□ 2.2
LSM6-202ENST00000502781 DUSP28Q4G0W2 176 aa28.76■■■□□ 2.2
LSM6-202ENST00000502781 MCTP2Q6DN12 878 aa28.76■■■□□ 2.2
LSM6-202ENST00000502781 REXO1Q8N1G1 1221 aaKnown RBP28.76■■■□□ 2.2
LSM6-202ENST00000502781 DAGLBQ8NCG7 672 aa28.76■■■□□ 2.2
LSM6-202ENST00000502781 BICD2Q8TD16 824 aa28.76■■■□□ 2.2
LSM6-202ENST00000502781 PHF20Q9BVI0 1012 aa28.76■■■□□ 2.2
LSM6-202ENST00000502781 ANO3Q9BYT9 981 aa28.76■■■□□ 2.2
LSM6-202ENST00000502781 XPNPEP3Q9NQH7 507 aa28.76■■■□□ 2.2
LSM6-202ENST00000502781 TMEM260Q9NX78 707 aa28.76■■■□□ 2.2
LSM6-202ENST00000502781 FRMPD3Q5JV73 1810 aa28.76■■■□□ 2.19
LSM6-202ENST00000502781 ADAMTS4O75173 837 aa28.75■■■□□ 2.19
LSM6-202ENST00000502781 TMEM63BQ5T3F8 832 aa28.75■■■□□ 2.19
LSM6-202ENST00000502781 IFFO2Q5TF58 517 aa28.75■■■□□ 2.19
LSM6-202ENST00000502781 GALNT17Q6IS24 598 aa28.75■■■□□ 2.19
LSM6-202ENST00000502781 CCDC62Q6P9F0 684 aa28.75■■■□□ 2.19
LSM6-202ENST00000502781 INPP4AQ96PE3 977 aaPredicted RBP28.75■■■□□ 2.19
LSM6-202ENST00000502781 ALG1Q9BT22 464 aa28.75■■■□□ 2.19
LSM6-202ENST00000502781 WDR11Q9BZH6 1224 aa28.75■■■□□ 2.19
LSM6-202ENST00000502781 UPF3AQ9H1J1 476 aaKnown RBP28.75■■■□□ 2.19
LSM6-202ENST00000502781 PCDHA4Q9UN74 947 aa28.75■■■□□ 2.19
LSM6-202ENST00000502781 Q9Y3F1 56 aa28.75■■■□□ 2.19
LSM6-202ENST00000502781 PGBD1Q96JS3 809 aa28.75■■■□□ 2.19
LSM6-202ENST00000502781 EHMT1Q9H9B1 1298 aa28.75■■■□□ 2.19
LSM6-202ENST00000502781 SYNRGQ9UMZ2 1314 aa28.74■■■□□ 2.19
LSM6-202ENST00000502781 M0R2N6 131 aa28.74■■■□□ 2.19
LSM6-202ENST00000502781 XBP1P17861 261 aa28.74■■■□□ 2.19
LSM6-202ENST00000502781 SREBF1P36956 1147 aa28.74■■■□□ 2.19
LSM6-202ENST00000502781 GJA9P57773 515 aa28.74■■■□□ 2.19
LSM6-202ENST00000502781 TTLL4Q14679 1199 aa28.74■■■□□ 2.19
LSM6-202ENST00000502781 JAKMIP3Q5VZ66 844 aa28.74■■■□□ 2.19
LSM6-202ENST00000502781 SEPT14Q6ZU15 432 aa28.74■■■□□ 2.19
LSM6-202ENST00000502781 ARRDC4Q8NCT1 418 aa28.74■■■□□ 2.19
LSM6-202ENST00000502781 CRYGNQ8WXF5 182 aa28.74■■■□□ 2.19
LSM6-202ENST00000502781 GJB4Q9NTQ9 266 aa28.74■■■□□ 2.19
LSM6-202ENST00000502781 NKRFO15226 690 aaKnown RBP eCLIP28.73■■■□□ 2.19
LSM6-202ENST00000502781 ARIH2O95376 493 aa28.73■■■□□ 2.19
LSM6-202ENST00000502781 PGK1P00558 417 aa28.73■■■□□ 2.19
LSM6-202ENST00000502781 HMGN5P82970 282 aaKnown RBP28.73■■■□□ 2.19
LSM6-202ENST00000502781 LRRC41Q15345 812 aa28.73■■■□□ 2.19
LSM6-202ENST00000502781 ZFP91Q96JP5 570 aaPredicted RBP28.73■■■□□ 2.19
LSM6-202ENST00000502781 KCNJ14Q9UNX9 436 aa28.73■■■□□ 2.19
LSM6-202ENST00000502781 DNM1LO00429 736 aa28.72■■■□□ 2.19
LSM6-202ENST00000502781 CTAGE5O15320 804 aa28.72■■■□□ 2.19
LSM6-202ENST00000502781 FARP2O94887 1054 aaPredicted RBP28.72■■■□□ 2.19
LSM6-202ENST00000502781 CST5P28325 142 aaPredicted RBP28.72■■■□□ 2.19
LSM6-202ENST00000502781 GJC2Q5T442 439 aaPredicted RBP28.72■■■□□ 2.19
LSM6-202ENST00000502781 BLIDQ8IZY5 108 aa28.72■■■□□ 2.19
LSM6-202ENST00000502781 KLHDC9Q8NEP7 349 aa28.72■■■□□ 2.19
LSM6-202ENST00000502781 RASGRP4Q8TDF6 673 aa28.72■■■□□ 2.19
LSM6-202ENST00000502781 TXNP10599 105 aaKnown RBP28.71■■■□□ 2.19
LSM6-202ENST00000502781 PTGS1P23219 599 aa28.71■■■□□ 2.19
LSM6-202ENST00000502781 ICAM3P32942 547 aa28.71■■■□□ 2.19
LSM6-202ENST00000502781 CCSAPQ6IQ19 270 aaPredicted RBP28.71■■■□□ 2.19
LSM6-202ENST00000502781 TLK2Q86UE8 772 aa28.71■■■□□ 2.19
LSM6-202ENST00000502781 DIS3LQ8TF46 1054 aaKnown RBP28.71■■■□□ 2.19
LSM6-202ENST00000502781 DDX41Q9UJV9 622 aaKnown RBP28.71■■■□□ 2.19
LSM6-202ENST00000502781 UBIAD1Q9Y5Z9 338 aa28.71■■■□□ 2.19
LSM6-202ENST00000502781 KIAA1217Q5T5P2 1943 aa28.7■■■□□ 2.18
LSM6-202ENST00000502781 TGFB3P10600 412 aa28.7■■■□□ 2.18
LSM6-202ENST00000502781 COL6A1P12109 1028 aa28.7■■■□□ 2.18
LSM6-202ENST00000502781 KCNV1Q6PIU1 500 aa28.7■■■□□ 2.18
LSM6-202ENST00000502781 RNF180Q86T96 592 aa28.7■■■□□ 2.18
LSM6-202ENST00000502781 RTEL1Q9NZ71 1219 aa28.7■■■□□ 2.18
LSM6-202ENST00000502781 CYP3A4P08684 503 aa28.69■■■□□ 2.18
LSM6-202ENST00000502781 IRX5P78411 483 aaPredicted RBP28.69■■■□□ 2.18
LSM6-202ENST00000502781 GNPTABQ3T906 1256 aa28.69■■■□□ 2.18
LSM6-202ENST00000502781 MRVI1Q9Y6F6 885 aa28.69■■■□□ 2.18
LSM6-202ENST00000502781 MYADML2A6NDP7 307 aa28.68■■■□□ 2.18
LSM6-202ENST00000502781 SPATA31C2B4DYI2 1134 aa28.68■■■□□ 2.18
LSM6-202ENST00000502781 DYNC1LI2O43237 492 aaPredicted RBP28.68■■■□□ 2.18
LSM6-202ENST00000502781 ITGB5P18084 799 aa28.68■■■□□ 2.18
LSM6-202ENST00000502781 ARHGAP4P98171 946 aa28.68■■■□□ 2.18
LSM6-202ENST00000502781 SEMA3FQ13275 785 aa28.68■■■□□ 2.18
LSM6-202ENST00000502781 LY6KQ17RY6 165 aa28.68■■■□□ 2.18
LSM6-202ENST00000502781 SNX21Q969T3 373 aa28.68■■■□□ 2.18
LSM6-202ENST00000502781 GPRASP2Q96D09 838 aa28.68■■■□□ 2.18
LSM6-202ENST00000502781 PAWRQ96IZ0 340 aaKnown RBP28.68■■■□□ 2.18
LSM6-202ENST00000502781 SPC25Q9HBM1 224 aa28.68■■■□□ 2.18
LSM6-202ENST00000502781 FIBPO43427 364 aa28.67■■■□□ 2.18
LSM6-202ENST00000502781 C6orf222P0C671 652 aaPredicted RBP28.67■■■□□ 2.18
LSM6-202ENST00000502781 CUL4AQ13619 759 aa28.67■■■□□ 2.18
LSM6-202ENST00000502781 COPS5Q92905 334 aa28.67■■■□□ 2.18
LSM6-202ENST00000502781 TSEN34Q9BSV6 310 aaKnown RBP28.67■■■□□ 2.18
LSM6-202ENST00000502781 AP5M1Q9H0R1 490 aa28.67■■■□□ 2.18
LSM6-202ENST00000502781 EDIL3O43854 480 aa28.66■■■□□ 2.18
LSM6-202ENST00000502781 KRT40Q6A162 431 aa28.66■■■□□ 2.18
LSM6-202ENST00000502781 NECAB2Q7Z6G3 386 aa28.66■■■□□ 2.18
LSM6-202ENST00000502781 NLRX1Q86UT6 975 aa28.66■■■□□ 2.18
LSM6-202ENST00000502781 JADE2Q9NQC1 790 aa28.66■■■□□ 2.18
LSM6-202ENST00000502781 KBTBD13C9JR72 458 aa28.65■■■□□ 2.18
LSM6-202ENST00000502781 GH1P01241 217 aa28.65■■■□□ 2.18
LSM6-202ENST00000502781 MMP1P03956 469 aa28.65■■■□□ 2.18
LSM6-202ENST00000502781 SP2Q02086 613 aa28.65■■■□□ 2.18
LSM6-202ENST00000502781 ARHGAP1Q07960 439 aa28.65■■■□□ 2.18
LSM6-202ENST00000502781 OXER1Q8TDS5 423 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms