RNA–Protein interactions for RNA: ENST00000498579.5

ECM1-207, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 943 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-207ENST00000498579 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.74■■□□□ 1.07
ECM1-207ENST00000498579 NOC4LQ9BVI4 516 aaKnown RBP21.74■■□□□ 1.07
ECM1-207ENST00000498579 IL23AQ9NPF7 189 aa21.74■■□□□ 1.07
ECM1-207ENST00000498579 DDX41Q9UJV9 622 aaKnown RBP21.74■■□□□ 1.07
ECM1-207ENST00000498579 STAM2O75886 525 aa21.73■■□□□ 1.07
ECM1-207ENST00000498579 MMP3P08254 477 aa21.73■■□□□ 1.07
ECM1-207ENST00000498579 TGFB3P10600 412 aa21.73■■□□□ 1.07
ECM1-207ENST00000498579 HOXA13P31271 388 aaPredicted RBP21.73■■□□□ 1.07
ECM1-207ENST00000498579 ARHGAP1Q07960 439 aa21.73■■□□□ 1.07
ECM1-207ENST00000498579 KRT32Q14532 448 aa21.73■■□□□ 1.07
ECM1-207ENST00000498579 PGM5Q15124 567 aa21.73■■□□□ 1.07
ECM1-207ENST00000498579 DGKDQ16760 1214 aa21.73■■□□□ 1.07
ECM1-207ENST00000498579 NBPF20Q3BBV1 942 aa21.73■■□□□ 1.07
ECM1-207ENST00000498579 TMEM240Q5SV17 173 aa21.73■■□□□ 1.07
ECM1-207ENST00000498579 SYNE3Q6ZMZ3 975 aa21.73■■□□□ 1.07
ECM1-207ENST00000498579 VSIG10LQ86VR7 867 aa21.73■■□□□ 1.07
ECM1-207ENST00000498579 RPUSD2Q8IZ73 545 aaKnown RBP21.73■■□□□ 1.07
ECM1-207ENST00000498579 AFG1LQ8WV93 481 aa21.73■■□□□ 1.07
ECM1-207ENST00000498579 CUL5Q93034 780 aa21.73■■□□□ 1.07
ECM1-207ENST00000498579 MYL10Q9BUA6 226 aa21.73■■□□□ 1.07
ECM1-207ENST00000498579 KATNAL1Q9BW62 490 aa21.73■■□□□ 1.07
ECM1-207ENST00000498579 PFKMP08237 780 aa21.72■■□□□ 1.07
ECM1-207ENST00000498579 MYCLP12524 364 aaPredicted RBP21.72■■□□□ 1.07
ECM1-207ENST00000498579 GNPTABQ3T906 1256 aa21.72■■□□□ 1.07
ECM1-207ENST00000498579 SGMS1Q86VZ5 419 aa21.72■■□□□ 1.07
ECM1-207ENST00000498579 FCHSD1Q86WN1 690 aa21.72■■□□□ 1.07
ECM1-207ENST00000498579 PPTC7Q8NI37 304 aa21.72■■□□□ 1.07
ECM1-207ENST00000498579 DHX37Q8IY37 1157 aaKnown RBP21.71■■□□□ 1.07
ECM1-207ENST00000498579 PIBF1Q8WXW3 757 aa21.71■■□□□ 1.07
ECM1-207ENST00000498579 NEK1Q96PY6 1258 aa21.71■■□□□ 1.07
ECM1-207ENST00000498579 TRMT13Q9NUP7 481 aaKnown RBP21.71■■□□□ 1.07
ECM1-207ENST00000498579 NOD1Q9Y239 953 aa21.71■■□□□ 1.07
ECM1-207ENST00000498579 TSGA10IPQ3SY00 556 aa21.7■■□□□ 1.06
ECM1-207ENST00000498579 ZNF365Q70YC5 407 aa21.7■■□□□ 1.06
ECM1-207ENST00000498579 SESTD1Q86VW0 696 aa21.7■■□□□ 1.06
ECM1-207ENST00000498579 SMARCC2Q8TAQ2 1214 aa21.7■■□□□ 1.06
ECM1-207ENST00000498579 HERVK_113Q902F9 699 aa21.7■■□□□ 1.06
ECM1-207ENST00000498579 PIK3CDO00329 1044 aa21.69■■□□□ 1.06
ECM1-207ENST00000498579 PITPNM1O00562 1244 aa21.69■■□□□ 1.06
ECM1-207ENST00000498579 FGBP02675 491 aa21.69■■□□□ 1.06
ECM1-207ENST00000498579 HMGB1P09429 215 aaKnown RBP21.69■■□□□ 1.06
ECM1-207ENST00000498579 ACRP10323 421 aa21.69■■□□□ 1.06
ECM1-207ENST00000498579 CCL23P55773 120 aa21.69■■□□□ 1.06
ECM1-207ENST00000498579 BFSP2Q13515 415 aa21.69■■□□□ 1.06
ECM1-207ENST00000498579 RASIP1Q5U651 963 aa21.69■■□□□ 1.06
ECM1-207ENST00000498579 C16orf59Q7L2K0 433 aa21.69■■□□□ 1.06
ECM1-207ENST00000498579 CCDC155Q8N6L0 562 aa21.69■■□□□ 1.06
ECM1-207ENST00000498579 FANCBQ8NB91 859 aa21.69■■□□□ 1.06
ECM1-207ENST00000498579 SEMA6BQ9H3T3 888 aa21.69■■□□□ 1.06
ECM1-207ENST00000498579 FRMPD4Q14CM0 1322 aa21.69■■□□□ 1.06
ECM1-207ENST00000498579 RFC2P35250 354 aa21.68■■□□□ 1.06
ECM1-207ENST00000498579 CELF3Q5SZQ8 465 aaKnown RBP21.68■■□□□ 1.06
ECM1-207ENST00000498579 XRRA1Q6P2D8 792 aa21.68■■□□□ 1.06
ECM1-207ENST00000498579 DHX32Q7L7V1 743 aaKnown RBP21.68■■□□□ 1.06
ECM1-207ENST00000498579 SKAP1Q86WV1 359 aa21.68■■□□□ 1.06
ECM1-207ENST00000498579 SRBD1Q8N5C6 995 aaKnown RBP21.68■■□□□ 1.06
ECM1-207ENST00000498579 RETREG2Q8NC44 543 aa21.68■■□□□ 1.06
ECM1-207ENST00000498579 FAM161BQ96MY7 647 aa21.68■■□□□ 1.06
ECM1-207ENST00000498579 GUCD1Q96NT3 240 aa21.68■■□□□ 1.06
ECM1-207ENST00000498579 WNT8AQ9H1J5 351 aa21.68■■□□□ 1.06
ECM1-207ENST00000498579 RBM28Q9NW13 759 aaKnown RBP21.68■■□□□ 1.06
ECM1-207ENST00000498579 UMODL1Q5DID0 1318 aa21.68■■□□□ 1.06
ECM1-207ENST00000498579 PPFIA4O75335 1185 aa21.67■■□□□ 1.06
ECM1-207ENST00000498579 RGS20O76081 388 aa21.67■■□□□ 1.06
ECM1-207ENST00000498579 PLEKHA8P1O95397 391 aa21.67■■□□□ 1.06
ECM1-207ENST00000498579 CYP2C9P11712 490 aa21.67■■□□□ 1.06
ECM1-207ENST00000498579 DNAJB2P25686 324 aa21.67■■□□□ 1.06
ECM1-207ENST00000498579 CHMP4BP1P59074 171 aa21.67■■□□□ 1.06
ECM1-207ENST00000498579 TMTC3Q6ZXV5 915 aa21.67■■□□□ 1.06
ECM1-207ENST00000498579 MICU3Q86XE3 530 aa21.67■■□□□ 1.06
ECM1-207ENST00000498579 IL31RAQ8NI17 732 aa21.67■■□□□ 1.06
ECM1-207ENST00000498579 CAGE1Q8TC20 777 aa21.67■■□□□ 1.06
ECM1-207ENST00000498579 SPATA33Q96N06 139 aa21.67■■□□□ 1.06
ECM1-207ENST00000498579 LRRC2Q9BYS8 371 aa21.67■■□□□ 1.06
ECM1-207ENST00000498579 MLXIPQ9HAP2 919 aa21.67■■□□□ 1.06
ECM1-207ENST00000498579 GGPS1O95749 300 aa21.66■■□□□ 1.06
ECM1-207ENST00000498579 F2P00734 622 aa21.66■■□□□ 1.06
ECM1-207ENST00000498579 NEFLP07196 543 aa21.66■■□□□ 1.06
ECM1-207ENST00000498579 HOXD8P13378 290 aaPredicted RBP21.66■■□□□ 1.06
ECM1-207ENST00000498579 RXRAP19793 462 aa21.66■■□□□ 1.06
ECM1-207ENST00000498579 PTGISQ16647 500 aa21.66■■□□□ 1.06
ECM1-207ENST00000498579 MYSM1Q5VVJ2 828 aa21.66■■□□□ 1.06
ECM1-207ENST00000498579 TEX2Q8IWB9 1127 aa21.66■■□□□ 1.06
ECM1-207ENST00000498579 C7orf31Q8N865 590 aa21.66■■□□□ 1.06
ECM1-207ENST00000498579 UBA1P22314 1058 aaKnown RBP21.65■■□□□ 1.06
ECM1-207ENST00000498579 ICAM3P32942 547 aa21.65■■□□□ 1.06
ECM1-207ENST00000498579 RCAN1P53805 252 aa21.65■■□□□ 1.06
ECM1-207ENST00000498579 NEDD9Q14511 834 aa21.65■■□□□ 1.06
ECM1-207ENST00000498579 RAB30Q15771 203 aa21.65■■□□□ 1.06
ECM1-207ENST00000498579 SLC17A8Q8NDX2 589 aa21.65■■□□□ 1.06
ECM1-207ENST00000498579 KAT2BQ92831 832 aa21.65■■□□□ 1.06
ECM1-207ENST00000498579 TIFAQ96CG3 184 aa21.65■■□□□ 1.06
ECM1-207ENST00000498579 INPP4AQ96PE3 977 aaPredicted RBP21.65■■□□□ 1.06
ECM1-207ENST00000498579 PSTPIP2Q9H939 334 aa21.65■■□□□ 1.06
ECM1-207ENST00000498579 FIBPO43427 364 aa21.64■■□□□ 1.05
ECM1-207ENST00000498579 PARNO95453 639 aaKnown RBP21.64■■□□□ 1.05
ECM1-207ENST00000498579 ACTN1P12814 892 aa21.64■■□□□ 1.05
ECM1-207ENST00000498579 PSEN2P49810 448 aa21.64■■□□□ 1.05
ECM1-207ENST00000498579 EXOSC10Q01780 885 aaKnown RBP21.64■■□□□ 1.05
ECM1-207ENST00000498579 MFSD10Q14728 455 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms