RNA–Protein interactions for RNA: ENST00000496809.5

VPS72-206, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-206ENST00000496809 COL20A1Q9P218 1284 aa14.37□□□□□ -0.11
VPS72-206ENST00000496809 DDX41Q9UJV9 622 aaKnown RBP14.37□□□□□ -0.11
VPS72-206ENST00000496809 COL6A3P12111 3177 aa14.37□□□□□ -0.11
VPS72-206ENST00000496809 PNMA6FA0A0J9YX94 578 aa14.36□□□□□ -0.11
VPS72-206ENST00000496809 GCOM1H8Y6P7 765 aaPredicted RBP14.36□□□□□ -0.11
VPS72-206ENST00000496809 PARNO95453 639 aaKnown RBP14.36□□□□□ -0.11
VPS72-206ENST00000496809 POLR2MP0CAP2 368 aa14.36□□□□□ -0.11
VPS72-206ENST00000496809 ATP2A2P16615 1042 aaKnown RBP14.36□□□□□ -0.11
VPS72-206ENST00000496809 PBX2P40425 430 aa14.36□□□□□ -0.11
VPS72-206ENST00000496809 ARHGAP1Q07960 439 aa14.36□□□□□ -0.11
VPS72-206ENST00000496809 PTGISQ16647 500 aa14.36□□□□□ -0.11
VPS72-206ENST00000496809 TMEM67Q5HYA8 995 aa14.36□□□□□ -0.11
VPS72-206ENST00000496809 CHST3Q7LGC8 479 aa14.36□□□□□ -0.11
VPS72-206ENST00000496809 HOMER1Q86YM7 354 aa14.36□□□□□ -0.11
VPS72-206ENST00000496809 TMTC2Q8N394 836 aa14.36□□□□□ -0.11
VPS72-206ENST00000496809 PPTC7Q8NI37 304 aa14.36□□□□□ -0.11
VPS72-206ENST00000496809 CAGE1Q8TC20 777 aa14.36□□□□□ -0.11
VPS72-206ENST00000496809 SYMPKQ92797 1274 aaKnown RBP14.36□□□□□ -0.11
VPS72-206ENST00000496809 MAP4K1Q92918 833 aa14.36□□□□□ -0.11
VPS72-206ENST00000496809 MAP3K14Q99558 947 aa14.36□□□□□ -0.11
VPS72-206ENST00000496809 PDCD2LQ9BRP1 358 aa14.36□□□□□ -0.11
VPS72-206ENST00000496809 PCDHA11Q9Y5I1 949 aa14.36□□□□□ -0.11
VPS72-206ENST00000496809 PPFIA4O75335 1185 aa14.35□□□□□ -0.11
VPS72-206ENST00000496809 IQCF3P0C7M6 154 aa14.35□□□□□ -0.11
VPS72-206ENST00000496809 MYCLP12524 364 aaPredicted RBP14.35□□□□□ -0.11
VPS72-206ENST00000496809 CCND2P30279 289 aa14.35□□□□□ -0.11
VPS72-206ENST00000496809 KIF5BP33176 963 aa14.35□□□□□ -0.11
VPS72-206ENST00000496809 TROAPQ12815 778 aa14.35□□□□□ -0.11
VPS72-206ENST00000496809 CASC1Q6TDU7 716 aa14.35□□□□□ -0.11
VPS72-206ENST00000496809 DEFB128Q7Z7B8 93 aa14.35□□□□□ -0.11
VPS72-206ENST00000496809 VSIG10LQ86VR7 867 aa14.35□□□□□ -0.11
VPS72-206ENST00000496809 C7orf31Q8N865 590 aa14.35□□□□□ -0.11
VPS72-206ENST00000496809 CTCFLQ8NI51 663 aaPredicted RBP14.35□□□□□ -0.11
VPS72-206ENST00000496809 PHOSPHO2Q8TCD6 241 aa14.35□□□□□ -0.11
VPS72-206ENST00000496809 PIGSQ96S52 555 aa14.35□□□□□ -0.11
VPS72-206ENST00000496809 FTOQ9C0B1 505 aaKnown RBP eCLIP14.35□□□□□ -0.113e-6■■■□□ 16.5
VPS72-206ENST00000496809 OPLAHO14841 1288 aa14.34□□□□□ -0.11
VPS72-206ENST00000496809 PPP1R11O60927 126 aaPredicted RBP14.34□□□□□ -0.11
VPS72-206ENST00000496809 STAM2O75886 525 aa14.34□□□□□ -0.11
VPS72-206ENST00000496809 SMARCA1P28370 1054 aa14.34□□□□□ -0.11
VPS72-206ENST00000496809 PGM5Q15124 567 aa14.34□□□□□ -0.11
VPS72-206ENST00000496809 GNPTABQ3T906 1256 aa14.34□□□□□ -0.11
VPS72-206ENST00000496809 AFAP1L1Q8TED9 768 aa14.34□□□□□ -0.11
VPS72-206ENST00000496809 SLC9A7Q96T83 725 aa14.34□□□□□ -0.11
VPS72-206ENST00000496809 LZTS2Q9BRK4 669 aa14.34□□□□□ -0.11
VPS72-206ENST00000496809 COL25A1Q9BXS0 654 aaPredicted RBP14.34□□□□□ -0.11
VPS72-206ENST00000496809 PRDM12Q9H4Q4 367 aa14.34□□□□□ -0.11
VPS72-206ENST00000496809 SCN10AQ9Y5Y9 1956 aa14.34□□□□□ -0.11
VPS72-206ENST00000496809 LAMA2P24043 3122 aaKnown RBP14.33□□□□□ -0.11
VPS72-206ENST00000496809 KIF28PB7ZC32 967 aa14.33□□□□□ -0.12
VPS72-206ENST00000496809 BAIAP3O94812 1187 aa14.33□□□□□ -0.12
VPS72-206ENST00000496809 HOXA13P31271 388 aaPredicted RBP14.33□□□□□ -0.12
VPS72-206ENST00000496809 GNAQP50148 359 aa14.33□□□□□ -0.12
VPS72-206ENST00000496809 IRX6P78412 446 aaPredicted RBP14.33□□□□□ -0.12
VPS72-206ENST00000496809 PPP2R2DQ66LE6 453 aa14.33□□□□□ -0.12
VPS72-206ENST00000496809 KAT2BQ92831 832 aa14.33□□□□□ -0.12
VPS72-206ENST00000496809 RRP36Q96EU6 259 aaKnown RBP14.33□□□□□ -0.12
VPS72-206ENST00000496809 NKX2-4Q9H2Z4 354 aa14.33□□□□□ -0.12
VPS72-206ENST00000496809 SEC63Q9UGP8 760 aaKnown RBP14.33□□□□□ -0.12
VPS72-206ENST00000496809 MYH6P13533 1939 aa14.33□□□□□ -0.12
VPS72-206ENST00000496809 CUL9Q8IWT3 2517 aa14.32□□□□□ -0.12
VPS72-206ENST00000496809 DDAH1O94760 285 aa14.32□□□□□ -0.12
VPS72-206ENST00000496809 F2P00734 622 aa14.32□□□□□ -0.12
VPS72-206ENST00000496809 CALM1P0DP23 149 aa14.32□□□□□ -0.12
VPS72-206ENST00000496809 CALM2P0DP24 149 aa14.32□□□□□ -0.12
VPS72-206ENST00000496809 CALM3P0DP25 149 aa14.32□□□□□ -0.12
VPS72-206ENST00000496809 SELPP16109 830 aa14.32□□□□□ -0.12
VPS72-206ENST00000496809 MCM5P33992 734 aa14.32□□□□□ -0.12
VPS72-206ENST00000496809 PSEN2P49810 448 aa14.32□□□□□ -0.12
VPS72-206ENST00000496809 MFSD10Q14728 455 aa14.32□□□□□ -0.12
VPS72-206ENST00000496809 KIAA0753Q2KHM9 967 aa14.32□□□□□ -0.12
VPS72-206ENST00000496809 CELF3Q5SZQ8 465 aaKnown RBP14.32□□□□□ -0.12
VPS72-206ENST00000496809 MYSM1Q5VVJ2 828 aa14.32□□□□□ -0.12
VPS72-206ENST00000496809 FCHSD1Q86WN1 690 aa14.32□□□□□ -0.12
VPS72-206ENST00000496809 MB21D2Q8IYB1 491 aaPredicted RBP14.32□□□□□ -0.12
VPS72-206ENST00000496809 IGDCC4Q8TDY8 1250 aa14.32□□□□□ -0.12
VPS72-206ENST00000496809 CUL5Q93034 780 aa14.32□□□□□ -0.12
VPS72-206ENST00000496809 TMEM87BQ96K49 555 aa14.32□□□□□ -0.12
VPS72-206ENST00000496809 SPATA33Q96N06 139 aa14.32□□□□□ -0.12
VPS72-206ENST00000496809 MLXIPQ9HAP2 919 aa14.32□□□□□ -0.12
VPS72-206ENST00000496809 GTF2IRD1Q9UHL9 959 aa14.32□□□□□ -0.12
VPS72-206ENST00000496809 RBM8AQ9Y5S9 174 aaKnown RBP14.32□□□□□ -0.12
VPS72-206ENST00000496809 CCDC69A6NI79 296 aa14.31□□□□□ -0.12
VPS72-206ENST00000496809 CYTH3O43739 400 aa14.31□□□□□ -0.12
VPS72-206ENST00000496809 EFCAB14O75071 495 aa14.31□□□□□ -0.12
VPS72-206ENST00000496809 GGPS1O95749 300 aa14.31□□□□□ -0.12
VPS72-206ENST00000496809 HOXD8P13378 290 aaPredicted RBP14.31□□□□□ -0.12
VPS72-206ENST00000496809 IGFBP4P22692 258 aa14.31□□□□□ -0.12
VPS72-206ENST00000496809 KCNJ6P48051 423 aa14.31□□□□□ -0.12
VPS72-206ENST00000496809 RBL2Q08999 1139 aa14.31□□□□□ -0.12
VPS72-206ENST00000496809 PTK7Q13308 1070 aa14.31□□□□□ -0.12
VPS72-206ENST00000496809 GDF6Q6KF10 455 aaPredicted RBP14.31□□□□□ -0.12
VPS72-206ENST00000496809 XRRA1Q6P2D8 792 aa14.31□□□□□ -0.12
VPS72-206ENST00000496809 NFXL1Q6ZNB6 911 aa14.31□□□□□ -0.12
VPS72-206ENST00000496809 LRRC8DQ7L1W4 858 aa14.31□□□□□ -0.12
VPS72-206ENST00000496809 ZNF654Q8IZM8 581 aa14.31□□□□□ -0.12
VPS72-206ENST00000496809 VWCEQ96DN2 955 aa14.31□□□□□ -0.12
VPS72-206ENST00000496809 ALG1Q9BT22 464 aa14.31□□□□□ -0.12
VPS72-206ENST00000496809 SPZ1Q9BXG8 430 aa14.31□□□□□ -0.12
VPS72-206ENST00000496809 TSPYL2Q9H2G4 693 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms