RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 MNS1Q8NEH6 495 aa14.55□□□□□ -0.08
GARNL3-220ENST00000496711 DDX12PQ92771 950 aa14.55□□□□□ -0.08
GARNL3-220ENST00000496711 GJA10Q969M2 543 aa14.55□□□□□ -0.08
GARNL3-220ENST00000496711 DNAJC7Q99615 494 aa14.55□□□□□ -0.08
GARNL3-220ENST00000496711 SEMA6BQ9H3T3 888 aa14.55□□□□□ -0.08
GARNL3-220ENST00000496711 CAPN11Q9UMQ6 739 aa14.55□□□□□ -0.08
GARNL3-220ENST00000496711 COL4A5P29400 1685 aa14.55□□□□□ -0.08
GARNL3-220ENST00000496711 SPDYE2BA6NHP3 402 aa14.55□□□□□ -0.08
GARNL3-220ENST00000496711 KIF5CO60282 957 aa14.55□□□□□ -0.08
GARNL3-220ENST00000496711 SPDYE6P0CI01 402 aa14.55□□□□□ -0.08
GARNL3-220ENST00000496711 IDEP14735 1019 aa14.55□□□□□ -0.08
GARNL3-220ENST00000496711 JAG1P78504 1218 aa14.55□□□□□ -0.08
GARNL3-220ENST00000496711 EHHADHQ08426 723 aa14.55□□□□□ -0.08
GARNL3-220ENST00000496711 ECM1Q16610 540 aa14.55□□□□□ -0.08
GARNL3-220ENST00000496711 BTNL9Q6UXG8 535 aa14.55□□□□□ -0.08
GARNL3-220ENST00000496711 SLFN12Q8IYM2 578 aa14.55□□□□□ -0.08
GARNL3-220ENST00000496711 ACRBPQ8NEB7 543 aa14.55□□□□□ -0.08
GARNL3-220ENST00000496711 CRYGNQ8WXF5 182 aa14.55□□□□□ -0.08
GARNL3-220ENST00000496711 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.55□□□□□ -0.08
GARNL3-220ENST00000496711 LUC7L2Q9Y383 392 aaKnown RBP14.55□□□□□ -0.08
GARNL3-220ENST00000496711 MMP14P50281 582 aa14.54□□□□□ -0.08
GARNL3-220ENST00000496711 ARHGAP4P98171 946 aa14.54□□□□□ -0.08
GARNL3-220ENST00000496711 LRRC63Q05C16 580 aa14.54□□□□□ -0.08
GARNL3-220ENST00000496711 RRP1BQ14684 758 aaKnown RBP14.54□□□□□ -0.08
GARNL3-220ENST00000496711 ERCC6LQ2NKX8 1250 aa14.54□□□□□ -0.08
GARNL3-220ENST00000496711 USH1GQ495M9 461 aa14.54□□□□□ -0.08
GARNL3-220ENST00000496711 RTKN2Q8IZC4 609 aa14.54□□□□□ -0.08
GARNL3-220ENST00000496711 RETREG2Q8NC44 543 aa14.54□□□□□ -0.08
GARNL3-220ENST00000496711 OR8K1Q8NGG5 319 aa14.54□□□□□ -0.08
GARNL3-220ENST00000496711 PSMD1Q99460 953 aa14.54□□□□□ -0.08
GARNL3-220ENST00000496711 NOC4LQ9BVI4 516 aaKnown RBP14.54□□□□□ -0.08
GARNL3-220ENST00000496711 NUP58Q9BVL2 599 aa14.54□□□□□ -0.08
GARNL3-220ENST00000496711 ARHGEF10LQ9HCE6 1279 aa14.54□□□□□ -0.08
GARNL3-220ENST00000496711 HDAC9Q9UKV0 1011 aa14.54□□□□□ -0.08
GARNL3-220ENST00000496711 MRFAP1Q9Y605 127 aa14.54□□□□□ -0.08
GARNL3-220ENST00000496711 RBBP6Q7Z6E9 1792 aaKnown RBP14.54□□□□□ -0.08
GARNL3-220ENST00000496711 SMCHD1A6NHR9 2005 aa14.54□□□□□ -0.08
GARNL3-220ENST00000496711 ABCB11O95342 1321 aa14.53□□□□□ -0.08
GARNL3-220ENST00000496711 SPDYE3A6NKU9 549 aa14.53□□□□□ -0.08
GARNL3-220ENST00000496711 TCP10L2B9ZVM9 353 aa14.53□□□□□ -0.08
GARNL3-220ENST00000496711 FGFR1OPO95684 399 aaKnown RBP14.53□□□□□ -0.08
GARNL3-220ENST00000496711 FOSP01100 380 aaPredicted RBP14.53□□□□□ -0.08
GARNL3-220ENST00000496711 SNAP25P60880 206 aa14.53□□□□□ -0.08
GARNL3-220ENST00000496711 MAP3K9P80192 1104 aa14.53□□□□□ -0.08
GARNL3-220ENST00000496711 COASYQ13057 564 aa14.53□□□□□ -0.08
GARNL3-220ENST00000496711 GLIPR1L2Q4G1C9 344 aa14.53□□□□□ -0.08
GARNL3-220ENST00000496711 ARHGAP29Q52LW3 1261 aa14.53□□□□□ -0.08
GARNL3-220ENST00000496711 MIIPQ5JXC2 388 aa14.53□□□□□ -0.08
GARNL3-220ENST00000496711 FKBP15Q5T1M5 1219 aa14.53□□□□□ -0.08
GARNL3-220ENST00000496711 FOXR2Q6PJQ5 311 aa14.53□□□□□ -0.08
GARNL3-220ENST00000496711 TTLL6Q8N841 843 aa14.53□□□□□ -0.08
GARNL3-220ENST00000496711 CARD6Q9BX69 1037 aa14.53□□□□□ -0.08
GARNL3-220ENST00000496711 TTYH3Q9C0H2 523 aa14.53□□□□□ -0.08
GARNL3-220ENST00000496711 A0A0U1RQJ8 604 aa14.52□□□□□ -0.08
GARNL3-220ENST00000496711 A0A1W2PRG0 241 aa14.52□□□□□ -0.08
GARNL3-220ENST00000496711 TBX3O15119 743 aa14.52□□□□□ -0.08
GARNL3-220ENST00000496711 TADA3O75528 432 aa14.52□□□□□ -0.08
GARNL3-220ENST00000496711 TRIM21P19474 475 aaKnown RBP14.52□□□□□ -0.08
GARNL3-220ENST00000496711 SREBF1P36956 1147 aa14.52□□□□□ -0.08
GARNL3-220ENST00000496711 TBC1D8BQ0IIM8 1120 aa14.52□□□□□ -0.08
GARNL3-220ENST00000496711 TSR1Q2NL82 804 aaKnown RBP14.52□□□□□ -0.08
GARNL3-220ENST00000496711 Q4G0T1 1027 aa14.52□□□□□ -0.08
GARNL3-220ENST00000496711 HAUS3Q68CZ6 603 aa14.52□□□□□ -0.08
GARNL3-220ENST00000496711 FBXO38Q6PIJ6 1188 aa14.52□□□□□ -0.08
GARNL3-220ENST00000496711 ATRIPQ8WXE1 791 aa14.52□□□□□ -0.08
GARNL3-220ENST00000496711 DNAJC19Q96DA6 116 aa14.52□□□□□ -0.08
GARNL3-220ENST00000496711 EEF2KMTQ96G04 330 aa14.52□□□□□ -0.08
GARNL3-220ENST00000496711 ERGIC2Q96RQ1 377 aa14.52□□□□□ -0.08
GARNL3-220ENST00000496711 TSG101Q99816 390 aa14.52□□□□□ -0.08
GARNL3-220ENST00000496711 BMP2KQ9NSY1 1161 aaPredicted RBP14.52□□□□□ -0.08
GARNL3-220ENST00000496711 ZNF70Q9UC06 446 aaPredicted RBP14.52□□□□□ -0.08
GARNL3-220ENST00000496711 POTEB3A0JP26 581 aa14.52□□□□□ -0.09
GARNL3-220ENST00000496711 CLRN2A0PK11 232 aa14.52□□□□□ -0.09
GARNL3-220ENST00000496711 EFCAB8A8MWE9 144 aa14.52□□□□□ -0.09
GARNL3-220ENST00000496711 POTECB2RU33 542 aa14.52□□□□□ -0.09
GARNL3-220ENST00000496711 PSMD14O00487 310 aa14.52□□□□□ -0.09
GARNL3-220ENST00000496711 DLGAP5Q15398 846 aa14.52□□□□□ -0.09
GARNL3-220ENST00000496711 FIGNQ5HY92 759 aa14.52□□□□□ -0.09
GARNL3-220ENST00000496711 POTEBQ6S5H4 581 aa14.52□□□□□ -0.09
GARNL3-220ENST00000496711 LARGE2Q8N3Y3 721 aa14.52□□□□□ -0.09
GARNL3-220ENST00000496711 ETNPPLQ8TBG4 499 aa14.52□□□□□ -0.09
GARNL3-220ENST00000496711 FAM151AQ8WW52 585 aa14.52□□□□□ -0.09
GARNL3-220ENST00000496711 UBXN4Q92575 508 aa14.52□□□□□ -0.09
GARNL3-220ENST00000496711 IQCDQ96DY2 449 aa14.52□□□□□ -0.09
GARNL3-220ENST00000496711 P2RX7Q99572 595 aaKnown RBP14.52□□□□□ -0.09
GARNL3-220ENST00000496711 FEZ1Q99689 392 aa14.52□□□□□ -0.09
GARNL3-220ENST00000496711 IRX2Q9BZI1 471 aaPredicted RBP14.52□□□□□ -0.09
GARNL3-220ENST00000496711 PRR12Q9ULL5 1215 aa14.52□□□□□ -0.09
GARNL3-220ENST00000496711 KIAA1024Q9UPX6 916 aa14.52□□□□□ -0.09
GARNL3-220ENST00000496711 CNTNAP1P78357 1384 aa14.52□□□□□ -0.09
GARNL3-220ENST00000496711 E9PMD0 336 aa14.51□□□□□ -0.09
GARNL3-220ENST00000496711 RAD17O75943 681 aa14.51□□□□□ -0.09
GARNL3-220ENST00000496711 NDUFA10O95299 355 aa14.51□□□□□ -0.09
GARNL3-220ENST00000496711 SSBP05455 408 aaKnown RBP eCLIP14.51□□□□□ -0.09
GARNL3-220ENST00000496711 VIL1P09327 827 aaKnown RBP14.51□□□□□ -0.09
GARNL3-220ENST00000496711 PLA2G4BP0C869 781 aa14.51□□□□□ -0.09
GARNL3-220ENST00000496711 STAT2P52630 851 aa14.51□□□□□ -0.09
GARNL3-220ENST00000496711 PPP2R3AQ06190 1150 aa14.51□□□□□ -0.09
GARNL3-220ENST00000496711 MEA1Q16626 185 aa14.51□□□□□ -0.09
GARNL3-220ENST00000496711 MAN2A1Q16706 1144 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms