RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 GCOM1H8Y6P7 765 aaPredicted RBP7.67□□□□□ -1.18
MSH5-217ENST00000494458 GTPBP6O43824 516 aaPredicted RBP7.67□□□□□ -1.18
MSH5-217ENST00000494458 PPP1R12BO60237 982 aaPredicted RBP7.67□□□□□ -1.18
MSH5-217ENST00000494458 FAM86B2P0C5J1 330 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 POLR2MP0CAP2 368 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 IREB2P48200 963 aaKnown RBP7.67□□□□□ -1.18
MSH5-217ENST00000494458 GRB10Q13322 594 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 KCNB1Q14721 858 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 GPR162Q16538 588 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 CALCRLQ16602 461 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 TKFCQ3LXA3 575 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 DPCR1Q3MIW9 517 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 TMEM119Q4V9L6 283 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 COBLL1Q53SF7 1204 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 KRT26Q7Z3Y9 468 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 PRRT2Q7Z6L0 340 aaPredicted RBP7.67□□□□□ -1.18
MSH5-217ENST00000494458 ERO1BQ86YB8 467 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 MCF2L2Q86YR7 1114 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 SLFN12Q8IYM2 578 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 ANKRD13AQ8IZ07 590 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 MLKLQ8NB16 471 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 PROCA1Q8NCQ7 364 aaPredicted RBP7.67□□□□□ -1.18
MSH5-217ENST00000494458 CDCA5Q96FF9 252 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 CCDC34Q96HJ3 373 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 AGBL1Q96MI9 1066 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 PNMA5Q96PV4 448 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 MED15Q96RN5 788 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 C7orf25Q9BPX7 421 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 BLOC1S4Q9NUP1 217 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 HOXC10Q9NYD6 342 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 MAN1B1Q9UKM7 699 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 ZNF214Q9UL59 606 aaPredicted RBP7.67□□□□□ -1.18
MSH5-217ENST00000494458 STK24Q9Y6E0 443 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 SMCHD1A6NHR9 2005 aa7.67□□□□□ -1.18
MSH5-217ENST00000494458 MYH7BA7E2Y1 1941 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 SPDYE3A6NKU9 549 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 MSH4O15457 936 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 KLRC4O43908 158 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 ZBED4O75132 1171 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 PSMD10O75832 226 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 FLOT1O75955 427 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 SMC2O95347 1197 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 MUTP22033 750 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 ERCC5P28715 1186 aaPredicted RBP7.66□□□□□ -1.18
MSH5-217ENST00000494458 CDC25AP30304 524 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 UBA7P41226 1012 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 TECP42680 631 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 HMGCS2P54868 508 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 EHHADHQ08426 723 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 IKQ13123 557 aaPredicted RBP7.66□□□□□ -1.18
MSH5-217ENST00000494458 PPIL2Q13356 520 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 DGKZQ13574 1117 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 CUL4BQ13620 913 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 KARSQ15046 597 aaKnown RBP7.66□□□□□ -1.18
MSH5-217ENST00000494458 ZYXQ15942 572 aaKnown RBP7.66□□□□□ -1.18
MSH5-217ENST00000494458 USH1GQ495M9 461 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 TPRNQ4KMQ1 711 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 XRRA1Q6P2D8 792 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 DLK2Q6UY11 383 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 CABP7Q86V35 215 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 LUZP1Q86V48 1076 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 PLA2G4DQ86XP0 818 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 CEP57L1Q8IYX8 460 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 RNF214Q8ND24 703 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 ENOX1Q8TC92 643 aaKnown RBP7.66□□□□□ -1.18
MSH5-217ENST00000494458 SYTL5Q8TDW5 730 aaPredicted RBP7.66□□□□□ -1.18
MSH5-217ENST00000494458 ERCC4Q92889 916 aaPredicted RBP7.66□□□□□ -1.18
MSH5-217ENST00000494458 SLC5A5Q92911 643 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 HS3ST6Q96QI5 342 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 FEZ1Q99689 392 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 RAB34Q9BZG1 259 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 NAT10Q9H0A0 1025 aaKnown RBP7.66□□□□□ -1.18
MSH5-217ENST00000494458 TTC12Q9H892 705 aaPredicted RBP7.66□□□□□ -1.18
MSH5-217ENST00000494458 COL20A1Q9P218 1284 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 STK17AQ9UEE5 414 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 LRWD1Q9UFC0 647 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 CCDC39Q9UFE4 941 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 VAV3Q9UKW4 847 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 PCDHA12Q9UN75 941 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 FZD1Q9UP38 647 aa7.66□□□□□ -1.18
MSH5-217ENST00000494458 SPDYE16A6NNV3 312 aaPredicted RBP7.65□□□□□ -1.18
MSH5-217ENST00000494458 PP2D1A8MPX8 630 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 PPP1R3GB7ZBB8 358 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 NFIBO00712 420 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 RAD21O60216 631 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 RHOBTB3O94955 611 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 SPATA31C1P0DKV0 1188 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 ZNF18P17022 549 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 TAL1P17542 331 aaPredicted RBP7.65□□□□□ -1.18
MSH5-217ENST00000494458 HOXA13P31271 388 aaPredicted RBP7.65□□□□□ -1.18
MSH5-217ENST00000494458 TXLNAP40222 546 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 TXKP42681 527 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 EMP3P54852 163 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 FKBP1BP68106 108 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 PPP2R5CQ13362 524 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 TMEM132BQ14DG7 1078 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 ECM1Q16610 540 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 CEP55Q53EZ4 464 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 MUM1L1Q5H9M0 696 aa7.65□□□□□ -1.18
MSH5-217ENST00000494458 RRAGBQ5VZM2 374 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms