RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 PTPN11Q06124 597 aaPredicted RBP15.54■□□□□ 0.08
CTDSP1-212ENST00000494067 NECTIN1Q15223 517 aa15.54■□□□□ 0.08
CTDSP1-212ENST00000494067 NBPF20Q3BBV1 942 aa15.54■□□□□ 0.08
CTDSP1-212ENST00000494067 TMEM67Q5HYA8 995 aa15.54■□□□□ 0.08
CTDSP1-212ENST00000494067 NFRKBQ6P4R8 1299 aa15.54■□□□□ 0.08
CTDSP1-212ENST00000494067 CATIPQ7Z7H3 387 aa15.54■□□□□ 0.08
CTDSP1-212ENST00000494067 RETREG2Q8NC44 543 aa15.54■□□□□ 0.08
CTDSP1-212ENST00000494067 GPKOWQ92917 476 aaPredicted RBP eCLIP15.54■□□□□ 0.08
CTDSP1-212ENST00000494067 TIFAQ96CG3 184 aa15.54■□□□□ 0.08
CTDSP1-212ENST00000494067 CTAGE1Q96RT6 745 aa15.54■□□□□ 0.08
CTDSP1-212ENST00000494067 CXXC1Q9P0U4 656 aaPredicted RBP15.54■□□□□ 0.08
CTDSP1-212ENST00000494067 MSRAQ9UJ68 235 aa15.54■□□□□ 0.08
CTDSP1-212ENST00000494067 NOD1Q9Y239 953 aa15.54■□□□□ 0.08
CTDSP1-212ENST00000494067 PCDHA1Q9Y5I3 950 aa15.54■□□□□ 0.08
CTDSP1-212ENST00000494067 PTPRSQ13332 1948 aa15.53■□□□□ 0.08
CTDSP1-212ENST00000494067 EIF3JO75822 258 aaKnown RBP15.53■□□□□ 0.08
CTDSP1-212ENST00000494067 PFKMP08237 780 aa15.53■□□□□ 0.08
CTDSP1-212ENST00000494067 CASTP20810 708 aaKnown RBP15.53■□□□□ 0.08
CTDSP1-212ENST00000494067 PBX2P40425 430 aa15.53■□□□□ 0.08
CTDSP1-212ENST00000494067 CHMP4BP1P59074 171 aa15.53■□□□□ 0.08
CTDSP1-212ENST00000494067 RAB30Q15771 203 aa15.53■□□□□ 0.08
CTDSP1-212ENST00000494067 RAB11FIP4Q86YS3 637 aa15.53■□□□□ 0.08
CTDSP1-212ENST00000494067 AFG1LQ8WV93 481 aa15.53■□□□□ 0.08
CTDSP1-212ENST00000494067 PIBF1Q8WXW3 757 aa15.53■□□□□ 0.08
CTDSP1-212ENST00000494067 MYLIPQ8WY64 445 aa15.53■□□□□ 0.08
CTDSP1-212ENST00000494067 HERVK_113Q902F9 699 aa15.53■□□□□ 0.08
CTDSP1-212ENST00000494067 KAT2BQ92831 832 aa15.53■□□□□ 0.08
CTDSP1-212ENST00000494067 SCLYQ96I15 445 aa15.53■□□□□ 0.08
CTDSP1-212ENST00000494067 PDCD2LQ9BRP1 358 aa15.53■□□□□ 0.08
CTDSP1-212ENST00000494067 ZNF576Q9H609 170 aa15.53■□□□□ 0.08
CTDSP1-212ENST00000494067 CHD9Q3L8U1 2897 aa15.53■□□□□ 0.08
CTDSP1-212ENST00000494067 SH2B2O14492 632 aaPredicted RBP15.52■□□□□ 0.08
CTDSP1-212ENST00000494067 PRC1O43663 620 aa15.52■□□□□ 0.08
CTDSP1-212ENST00000494067 PLEKHA8P1O95397 391 aa15.52■□□□□ 0.08
CTDSP1-212ENST00000494067 NR3C2P08235 984 aa15.52■□□□□ 0.08
CTDSP1-212ENST00000494067 MMP3P08254 477 aa15.52■□□□□ 0.08
CTDSP1-212ENST00000494067 RXRAP19793 462 aa15.52■□□□□ 0.08
CTDSP1-212ENST00000494067 CREB3L3Q68CJ9 461 aa15.52■□□□□ 0.08
CTDSP1-212ENST00000494067 KCNV1Q6PIU1 500 aa15.52■□□□□ 0.08
CTDSP1-212ENST00000494067 CASC1Q6TDU7 716 aa15.52■□□□□ 0.08
CTDSP1-212ENST00000494067 OTOP2Q7RTS6 562 aa15.52■□□□□ 0.08
CTDSP1-212ENST00000494067 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.52■□□□□ 0.08
CTDSP1-212ENST00000494067 ZNF654Q8IZM8 581 aa15.52■□□□□ 0.08
CTDSP1-212ENST00000494067 CMTR1Q8N1G2 835 aaKnown RBP15.52■□□□□ 0.08
CTDSP1-212ENST00000494067 CCDC155Q8N6L0 562 aa15.52■□□□□ 0.08
CTDSP1-212ENST00000494067 MAFAQ8NHW3 353 aaPredicted RBP15.52■□□□□ 0.08
CTDSP1-212ENST00000494067 LRRC2Q9BYS8 371 aa15.52■□□□□ 0.08
CTDSP1-212ENST00000494067 BCAS3Q9H6U6 928 aa15.52■□□□□ 0.08
CTDSP1-212ENST00000494067 DDX41Q9UJV9 622 aaKnown RBP15.52■□□□□ 0.08
CTDSP1-212ENST00000494067 MRVI1Q9Y6F6 885 aa15.52■□□□□ 0.08
CTDSP1-212ENST00000494067 GCOM1H8Y6P7 765 aaPredicted RBP15.51■□□□□ 0.07
CTDSP1-212ENST00000494067 SORBS3O60504 671 aa15.51■□□□□ 0.07
CTDSP1-212ENST00000494067 POLR2MP0CAP2 368 aa15.51■□□□□ 0.07
CTDSP1-212ENST00000494067 ACTN1P12814 892 aa15.51■□□□□ 0.07
CTDSP1-212ENST00000494067 SP2Q02086 613 aa15.51■□□□□ 0.07
CTDSP1-212ENST00000494067 BFSP2Q13515 415 aa15.51■□□□□ 0.07
CTDSP1-212ENST00000494067 PGM5Q15124 567 aa15.51■□□□□ 0.07
CTDSP1-212ENST00000494067 DGKDQ16760 1214 aa15.51■□□□□ 0.07
CTDSP1-212ENST00000494067 DHX37Q8IY37 1157 aaKnown RBP15.51■□□□□ 0.07
CTDSP1-212ENST00000494067 KATNAL1Q9BW62 490 aa15.51■□□□□ 0.07
CTDSP1-212ENST00000494067 PNMA6FA0A0J9YX94 578 aa15.5■□□□□ 0.07
CTDSP1-212ENST00000494067 ZBBXA8MT70 800 aa15.5■□□□□ 0.07
CTDSP1-212ENST00000494067 MYCLP12524 364 aaPredicted RBP15.5■□□□□ 0.07
CTDSP1-212ENST00000494067 KIF5BP33176 963 aa15.5■□□□□ 0.07
CTDSP1-212ENST00000494067 RFC2P35250 354 aa15.5■□□□□ 0.07
CTDSP1-212ENST00000494067 LAMC2Q13753 1193 aa15.5■□□□□ 0.07
CTDSP1-212ENST00000494067 BMP2KLQ5H9B9 411 aa15.5■□□□□ 0.07
CTDSP1-212ENST00000494067 CENPQQ7L2Z9 268 aaPredicted RBP15.5■□□□□ 0.07
CTDSP1-212ENST00000494067 TMTC2Q8N394 836 aa15.5■□□□□ 0.07
CTDSP1-212ENST00000494067 SRBD1Q8N5C6 995 aaKnown RBP15.5■□□□□ 0.07
CTDSP1-212ENST00000494067 CTCFLQ8NI51 663 aaPredicted RBP15.5■□□□□ 0.07
CTDSP1-212ENST00000494067 GAS2L1Q99501 681 aaPredicted RBP15.5■□□□□ 0.07
CTDSP1-212ENST00000494067 PBX4Q9BYU1 374 aa15.5■□□□□ 0.07
CTDSP1-212ENST00000494067 TELO2Q9Y4R8 837 aa15.5■□□□□ 0.07
CTDSP1-212ENST00000494067 SLC4A7Q9Y6M7 1214 aa15.5■□□□□ 0.07
CTDSP1-212ENST00000494067 FRMPD4Q14CM0 1322 aa15.49■□□□□ 0.07
CTDSP1-212ENST00000494067 MRPS9P82933 396 aaKnown RBP15.49■□□□□ 0.07
CTDSP1-212ENST00000494067 HIC1Q14526 733 aa15.49■□□□□ 0.07
CTDSP1-212ENST00000494067 GRIN2CQ14957 1233 aa15.49■□□□□ 0.07
CTDSP1-212ENST00000494067 NFXL1Q6ZNB6 911 aa15.49■□□□□ 0.07
CTDSP1-212ENST00000494067 DEFB128Q7Z7B8 93 aa15.49■□□□□ 0.07
CTDSP1-212ENST00000494067 VSIG10LQ86VR7 867 aa15.49■□□□□ 0.07
CTDSP1-212ENST00000494067 FCHSD1Q86WN1 690 aa15.49■□□□□ 0.07
CTDSP1-212ENST00000494067 RASEFQ8IZ41 740 aa15.49■□□□□ 0.07
CTDSP1-212ENST00000494067 C7orf31Q8N865 590 aa15.49■□□□□ 0.07
CTDSP1-212ENST00000494067 MTA3Q9BTC8 594 aa15.49■□□□□ 0.07
CTDSP1-212ENST00000494067 SLC28A3Q9HAS3 691 aa15.49■□□□□ 0.07
CTDSP1-212ENST00000494067 ANO2Q9NQ90 1003 aa15.49■□□□□ 0.07
CTDSP1-212ENST00000494067 TRIP12Q14669 1992 aaPredicted RBP15.49■□□□□ 0.07
CTDSP1-212ENST00000494067 hCG_1642624A0A1W2PR95 340 aa15.48■□□□□ 0.07
CTDSP1-212ENST00000494067 PITPNM1O00562 1244 aa15.48■□□□□ 0.07
CTDSP1-212ENST00000494067 DDAH1O94760 285 aa15.48■□□□□ 0.07
CTDSP1-212ENST00000494067 ZNF286BP0CG31 522 aa15.48■□□□□ 0.07
CTDSP1-212ENST00000494067 CCND2P30279 289 aa15.48■□□□□ 0.07
CTDSP1-212ENST00000494067 GNAQP50148 359 aa15.48■□□□□ 0.07
CTDSP1-212ENST00000494067 SEMA3FQ13275 785 aa15.48■□□□□ 0.07
CTDSP1-212ENST00000494067 GPNMBQ14956 572 aa15.48■□□□□ 0.07
CTDSP1-212ENST00000494067 PTGISQ16647 500 aa15.48■□□□□ 0.07
CTDSP1-212ENST00000494067 ADCK5Q3MIX3 580 aa15.48■□□□□ 0.07
CTDSP1-212ENST00000494067 GDF6Q6KF10 455 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms