RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 GH1P01241 217 aa9.74□□□□□ -0.85
SMARCB1-207ENST00000491967 MMP3P08254 477 aa9.74□□□□□ -0.85
SMARCB1-207ENST00000491967 MYL3P08590 195 aa9.74□□□□□ -0.85
SMARCB1-207ENST00000491967 RFC2P35250 354 aa9.74□□□□□ -0.85
SMARCB1-207ENST00000491967 PBX2P40425 430 aa9.74□□□□□ -0.85
SMARCB1-207ENST00000491967 TRAF1Q13077 416 aa9.74□□□□□ -0.85
SMARCB1-207ENST00000491967 GPNMBQ14956 572 aa9.74□□□□□ -0.85
SMARCB1-207ENST00000491967 LY6KQ17RY6 165 aa9.74□□□□□ -0.85
SMARCB1-207ENST00000491967 KCNV1Q6PIU1 500 aa9.74□□□□□ -0.85
SMARCB1-207ENST00000491967 PPTC7Q8NI37 304 aa9.74□□□□□ -0.85
SMARCB1-207ENST00000491967 AFG1LQ8WV93 481 aa9.74□□□□□ -0.85
SMARCB1-207ENST00000491967 MYLIPQ8WY64 445 aa9.74□□□□□ -0.85
SMARCB1-207ENST00000491967 TIFAQ96CG3 184 aa9.74□□□□□ -0.85
SMARCB1-207ENST00000491967 PDCD2LQ9BRP1 358 aa9.74□□□□□ -0.85
SMARCB1-207ENST00000491967 LSG1Q9H089 658 aaKnown RBP9.74□□□□□ -0.85
SMARCB1-207ENST00000491967 FRMPD4Q14CM0 1322 aa9.74□□□□□ -0.85
SMARCB1-207ENST00000491967 TANC1Q9C0D5 1861 aa9.74□□□□□ -0.85
SMARCB1-207ENST00000491967 PPFIA4O75335 1185 aa9.73□□□□□ -0.85
SMARCB1-207ENST00000491967 CFBP00751 764 aa9.73□□□□□ -0.85
SMARCB1-207ENST00000491967 IQCF3P0C7M6 154 aa9.73□□□□□ -0.85
SMARCB1-207ENST00000491967 TGFB3P10600 412 aa9.73□□□□□ -0.85
SMARCB1-207ENST00000491967 CYP2C9P11712 490 aa9.73□□□□□ -0.85
SMARCB1-207ENST00000491967 CCL23P55773 120 aa9.73□□□□□ -0.85
SMARCB1-207ENST00000491967 LAMC2Q13753 1193 aa9.73□□□□□ -0.85
SMARCB1-207ENST00000491967 NECTIN1Q15223 517 aa9.73□□□□□ -0.85
SMARCB1-207ENST00000491967 ARHGEF16Q5VV41 709 aa9.73□□□□□ -0.85
SMARCB1-207ENST00000491967 MYSM1Q5VVJ2 828 aa9.73□□□□□ -0.85
SMARCB1-207ENST00000491967 SEPT14Q6ZU15 432 aa9.73□□□□□ -0.85
SMARCB1-207ENST00000491967 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.73□□□□□ -0.85
SMARCB1-207ENST00000491967 MAFAQ8NHW3 353 aaPredicted RBP9.73□□□□□ -0.85
SMARCB1-207ENST00000491967 PIGSQ96S52 555 aa9.73□□□□□ -0.85
SMARCB1-207ENST00000491967 SPZ1Q9BXG8 430 aa9.73□□□□□ -0.85
SMARCB1-207ENST00000491967 LY9Q9HBG7 655 aa9.73□□□□□ -0.85
SMARCB1-207ENST00000491967 GPHNQ9NQX3 736 aaPredicted RBP9.73□□□□□ -0.85
SMARCB1-207ENST00000491967 RBM8AQ9Y5S9 174 aaKnown RBP9.73□□□□□ -0.85
SMARCB1-207ENST00000491967 PIK3CDO00329 1044 aa9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 F2P00734 622 aa9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 EIF2AK2P19525 551 aaKnown RBP9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 CASTP20810 708 aaKnown RBP9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 HOXC8P31273 242 aa9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 ICAM3P32942 547 aa9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 IRX6P78412 446 aaPredicted RBP9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 SP2Q02086 613 aa9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 COL9A3Q14050 684 aaPredicted RBP9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 WTAPQ15007 396 aa9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 SART3Q15020 963 aaKnown RBP9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 PGM5Q15124 567 aa9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 RAB30Q15771 203 aa9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 DGKDQ16760 1214 aa9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 CELF3Q5SZQ8 465 aaKnown RBP9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 OTOP2Q7RTS6 562 aa9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 TMTC2Q8N394 836 aa9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 PHOSPHO2Q8TCD6 241 aa9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 SCLYQ96I15 445 aa9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 MTIF3Q9H2K0 278 aaKnown RBP9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 YBX2Q9Y2T7 364 aaKnown RBP9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 PCDHA11Q9Y5I1 949 aa9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 TRANK1O15050 2925 aa9.72□□□□□ -0.85
SMARCB1-207ENST00000491967 ERICH2A1L162 156 aa9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 GCOM1H8Y6P7 765 aaPredicted RBP9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 DHX16O60231 1041 aaKnown RBP9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 STAM2O75886 525 aa9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 DDAH1O94760 285 aa9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 POLR2MP0CAP2 368 aa9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 FOSL2P15408 326 aa9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 HOXA13P31271 388 aaPredicted RBP9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 LIFRP42702 1097 aa9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 MRPS9P82933 396 aaKnown RBP9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 BFSP2Q13515 415 aa9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 TRIM71Q2Q1W2 868 aaKnown RBP9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 TMEM67Q5HYA8 995 aa9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 GDF6Q6KF10 455 aaPredicted RBP9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 TRAF7Q6Q0C0 670 aa9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 CHST3Q7LGC8 479 aa9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 CATIPQ7Z7H3 387 aa9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 RALYLQ86SE5 291 aaKnown RBP9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 IL31RAQ8NI17 732 aa9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 CAGE1Q8TC20 777 aa9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 DHX38Q92620 1227 aaKnown RBP9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 INPP4AQ96PE3 977 aaPredicted RBP9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 ESYT1Q9BSJ8 1104 aa9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 C16orf70Q9BSU1 422 aa9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 COL25A1Q9BXS0 654 aaPredicted RBP9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 GTF2IRD1Q9UHL9 959 aa9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 SLC4A7Q9Y6M7 1214 aa9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 PTPRSQ13332 1948 aa9.71□□□□□ -0.86
SMARCB1-207ENST00000491967 PRRC2BQ5JSZ5 2229 aaKnown RBP9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 SPATA31C2B4DYI2 1134 aa9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 SH2B2O14492 632 aaPredicted RBP9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 MEIS2O14770 477 aa9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 SLC27A2O14975 620 aa9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 PARNO95453 639 aaKnown RBP9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 CXCL10P02778 98 aa9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 POU3F3P20264 500 aaPredicted RBP9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 MCM5P33992 734 aa9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 ADGRE1Q14246 886 aa9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 HIC1Q14526 733 aa9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 PTGISQ16647 500 aa9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 HSDL1Q3SXM5 330 aa9.7□□□□□ -0.86
SMARCB1-207ENST00000491967 TSGA10IPQ3SY00 556 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms