RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 CCDC96Q2M329 555 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 TTC22Q5TAA0 569 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 MAMDC4Q6UXC1 1216 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 MFSD6Q6ZSS7 791 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 FAM160B2Q86V87 743 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 ANKRD35Q8N283 1001 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 FAM133AQ8N9E0 248 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 USP38Q8NB14 1042 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 ARRDC4Q8NCT1 418 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 CHST13Q8NET6 341 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 TBC1D5Q92609 795 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 TRIM43Q96BQ3 446 aaPredicted RBP8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 KATNBL1Q9H079 304 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 A1CFQ9NQ94 594 aaKnown RBP8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 DIAPH3Q9NSV4 1193 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 RNF146Q9NTX7 359 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 ZSWIM5Q9P217 1185 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 SYNPO2Q9UMS6 1093 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 PCDHGC3Q9UN70 934 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 ATP11BQ9Y2G3 1177 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 TAF6LQ9Y6J9 622 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 WASF2Q9Y6W5 498 aa8.62□□□□□ -1.03
PRPF4B-208ENST00000490653 RBAK-RBAKDNI3L0D1 243 aa8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 MSCO60682 206 aa8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 PLA2G6O60733 806 aa8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 ADAMTS4O75173 837 aa8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 CCNYL3P0C7X3 344 aa8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 FDX1P10109 184 aa8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 PDHBP11177 359 aa8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 LORP23490 312 aaPredicted RBP8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 GMPRP36959 345 aa8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 ACVR2BQ13705 512 aa8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 TRIM60Q495X7 471 aa8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 SYDE2Q5VT97 1194 aa8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 BTNL9Q6UXG8 535 aa8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 CYB5R4Q7L1T6 521 aa8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 CCDC144CPQ8IYA2 1237 aa8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 KLHDC9Q8NEP7 349 aa8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 DCAF4Q8WV16 495 aa8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 MYLIPQ8WY64 445 aa8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 RANBP17Q9H2T7 1088 aaKnown RBP8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 SEMA6BQ9H3T3 888 aa8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 XPNPEP3Q9NQH7 507 aa8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 PDGFCQ9NRA1 345 aa8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 RAPGEFL1Q9UHV5 662 aa8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 ZHX1Q9UKY1 873 aaPredicted RBP8.61□□□□□ -1.03
PRPF4B-208ENST00000490653 CHD9Q3L8U1 2897 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 ZMYM6O95789 1325 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 FAM181BA6NEQ2 426 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 TULP1O00294 542 aaPredicted RBP8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 NFIBO00712 420 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 CTAGE5O15320 804 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 RARBP10826 455 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 CHMLP26374 656 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 COPB2P35606 906 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 OAZ1P54368 228 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 BEX3Q00994 111 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 TLE2Q04725 743 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 ZNF543Q08ER8 600 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 BAATQ14032 418 aaPredicted RBP8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 COL9A3Q14050 684 aaPredicted RBP8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 SNX17Q15036 470 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 KCNA10Q16322 511 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 CCDC144BQ3MJ40 725 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 CCSAPQ6IQ19 270 aaPredicted RBP8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 NSMFQ6X4W1 530 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 ARMCX2Q7L311 632 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 EEPD1Q7L9B9 569 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 TICAM2Q86XR7 235 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 CLEC4DQ8WXI8 215 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 DSCC1Q9BVC3 393 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 ACAD9Q9H845 621 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 PRDM6Q9NQX0 595 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 FAM184BQ9ULE4 1060 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 CCPG1Q9ULG6 757 aa8.6□□□□□ -1.03
PRPF4B-208ENST00000490653 SYNGAP1Q96PV0 1343 aa8.59□□□□□ -1.03
PRPF4B-208ENST00000490653 KBTBD13C9JR72 458 aa8.59□□□□□ -1.03
PRPF4B-208ENST00000490653 H3BM21 787 aa8.59□□□□□ -1.03
PRPF4B-208ENST00000490653 SNHG28P0DPA3 235 aa8.59□□□□□ -1.03
PRPF4B-208ENST00000490653 AKR1A1P14550 325 aa8.59□□□□□ -1.03
PRPF4B-208ENST00000490653 PTPRNQ16849 979 aa8.59□□□□□ -1.03
PRPF4B-208ENST00000490653 TAPT1Q6NXT6 567 aa8.59□□□□□ -1.03
PRPF4B-208ENST00000490653 STAG2Q8N3U4 1231 aa8.59□□□□□ -1.03
PRPF4B-208ENST00000490653 BADQ92934 168 aa8.59□□□□□ -1.03
PRPF4B-208ENST00000490653 IRF7Q92985 503 aa8.59□□□□□ -1.03
PRPF4B-208ENST00000490653 TTC14Q96N46 770 aa8.59□□□□□ -1.03
PRPF4B-208ENST00000490653 VAT1LQ9HCJ6 419 aa8.59□□□□□ -1.03
PRPF4B-208ENST00000490653 PDLIM7Q9NR12 457 aa8.59□□□□□ -1.03
PRPF4B-208ENST00000490653 CYP39A1Q9NYL5 469 aa8.59□□□□□ -1.03
PRPF4B-208ENST00000490653 FBXO40Q9UH90 709 aa8.59□□□□□ -1.03
PRPF4B-208ENST00000490653 NRBP1Q9UHY1 535 aa8.59□□□□□ -1.03
PRPF4B-208ENST00000490653 PHF24Q9UPV7 400 aa8.59□□□□□ -1.03
PRPF4B-208ENST00000490653 CNPY2Q9Y2B0 182 aa8.59□□□□□ -1.03
PRPF4B-208ENST00000490653 LCTP09848 1927 aa8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 SYNRGQ9UMZ2 1314 aa8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 A0A1W2PQ45 241 aaPredicted RBP8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 A0A1W2PQY0 241 aa8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 DUSP11O75319 330 aaKnown RBP8.58□□□□□ -1.04
PRPF4B-208ENST00000490653 ICAM1P05362 532 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms