RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 RFC2P35250 354 aa13.35□□□□□ -0.27
SNU13-208ENST00000488571 TAP1Q03518 808 aa13.35□□□□□ -0.27
SNU13-208ENST00000488571 KRT40Q6A162 431 aa13.35□□□□□ -0.27
SNU13-208ENST00000488571 ZNF589Q86UQ0 364 aaPredicted RBP13.35□□□□□ -0.27
SNU13-208ENST00000488571 DNERQ8NFT8 737 aa13.35□□□□□ -0.27
SNU13-208ENST00000488571 CTAGE1Q96RT6 745 aa13.35□□□□□ -0.27
SNU13-208ENST00000488571 SLC9A7Q96T83 725 aa13.35□□□□□ -0.27
SNU13-208ENST00000488571 CERS4Q9HA82 394 aa13.35□□□□□ -0.27
SNU13-208ENST00000488571 TRIP12Q14669 1992 aaPredicted RBP13.34□□□□□ -0.27
SNU13-208ENST00000488571 FAM205CA6NFA0 338 aa13.34□□□□□ -0.27
SNU13-208ENST00000488571 KPNA6O60684 536 aa13.34□□□□□ -0.27
SNU13-208ENST00000488571 TXNP10599 105 aaKnown RBP13.34□□□□□ -0.27
SNU13-208ENST00000488571 ACTN1P12814 892 aa13.34□□□□□ -0.27
SNU13-208ENST00000488571 PDE1AP54750 535 aa13.34□□□□□ -0.27
SNU13-208ENST00000488571 HAND2P61296 217 aa13.34□□□□□ -0.27
SNU13-208ENST00000488571 PTPN11Q06124 597 aaPredicted RBP13.34□□□□□ -0.27
SNU13-208ENST00000488571 GPNMBQ14956 572 aa13.34□□□□□ -0.27
SNU13-208ENST00000488571 BRDTQ58F21 947 aaPredicted RBP13.34□□□□□ -0.27
SNU13-208ENST00000488571 CCDC62Q6P9F0 684 aa13.34□□□□□ -0.27
SNU13-208ENST00000488571 SPRED2Q7Z698 418 aa13.34□□□□□ -0.27
SNU13-208ENST00000488571 TBC1D10CQ8IV04 446 aa13.34□□□□□ -0.27
SNU13-208ENST00000488571 HERC6Q8IVU3 1022 aa13.34□□□□□ -0.27
SNU13-208ENST00000488571 IL27Q8NEV9 243 aa13.34□□□□□ -0.27
SNU13-208ENST00000488571 PHOSPHO2Q8TCD6 241 aa13.34□□□□□ -0.27
SNU13-208ENST00000488571 CPVLQ9H3G5 476 aa13.34□□□□□ -0.27
SNU13-208ENST00000488571 PNMA2Q9UL42 364 aa13.34□□□□□ -0.27
SNU13-208ENST00000488571 RAD50Q92878 1312 aa13.34□□□□□ -0.27
SNU13-208ENST00000488571 KIAA1217Q5T5P2 1943 aa13.33□□□□□ -0.28
SNU13-208ENST00000488571 NMIQ13287 307 aaPredicted RBP13.33□□□□□ -0.28
SNU13-208ENST00000488571 MCMDC2Q4G0Z9 681 aa13.33□□□□□ -0.28
SNU13-208ENST00000488571 ANKRD45Q5TZF3 282 aa13.33□□□□□ -0.28
SNU13-208ENST00000488571 RGS22Q8NE09 1264 aa13.33□□□□□ -0.28
SNU13-208ENST00000488571 TTC14Q96N46 770 aa13.33□□□□□ -0.28
SNU13-208ENST00000488571 LAMA4Q16363 1823 aa13.32□□□□□ -0.28
SNU13-208ENST00000488571 POTEB3A0JP26 581 aa13.32□□□□□ -0.28
SNU13-208ENST00000488571 RBAK-RBAKDNI3L0D1 243 aa13.32□□□□□ -0.28
SNU13-208ENST00000488571 LPXNO60711 386 aa13.32□□□□□ -0.28
SNU13-208ENST00000488571 GOLGA8HP0CJ92 632 aa13.32□□□□□ -0.28
SNU13-208ENST00000488571 HOXB1P14653 301 aaPredicted RBP13.32□□□□□ -0.28
SNU13-208ENST00000488571 BFSP2Q13515 415 aa13.32□□□□□ -0.28
SNU13-208ENST00000488571 PTGISQ16647 500 aa13.32□□□□□ -0.28
SNU13-208ENST00000488571 USH1GQ495M9 461 aa13.32□□□□□ -0.28
SNU13-208ENST00000488571 POTEBQ6S5H4 581 aa13.32□□□□□ -0.28
SNU13-208ENST00000488571 RETREG2Q8NC44 543 aa13.32□□□□□ -0.28
SNU13-208ENST00000488571 AFG1LQ8WV93 481 aa13.32□□□□□ -0.28
SNU13-208ENST00000488571 ARNTL2Q8WYA1 636 aa13.32□□□□□ -0.28
SNU13-208ENST00000488571 TBC1D5Q92609 795 aa13.32□□□□□ -0.28
SNU13-208ENST00000488571 KAT2BQ92831 832 aa13.32□□□□□ -0.28
SNU13-208ENST00000488571 HS3ST6Q96QI5 342 aa13.32□□□□□ -0.28
SNU13-208ENST00000488571 MPHOSPH6Q99547 160 aaKnown RBP13.32□□□□□ -0.28
SNU13-208ENST00000488571 FTOQ9C0B1 505 aaKnown RBP eCLIP13.32□□□□□ -0.28
SNU13-208ENST00000488571 COL20A1Q9P218 1284 aa13.32□□□□□ -0.28
SNU13-208ENST00000488571 NEDD4P46934 1319 aa13.32□□□□□ -0.28
SNU13-208ENST00000488571 GTPBP6O43824 516 aaPredicted RBP13.31□□□□□ -0.28
SNU13-208ENST00000488571 BAIAP3O94812 1187 aa13.31□□□□□ -0.28
SNU13-208ENST00000488571 MMP3P08254 477 aa13.31□□□□□ -0.28
SNU13-208ENST00000488571 PCP11498 1178 aaKnown RBP13.31□□□□□ -0.28
SNU13-208ENST00000488571 ARHGAP1Q07960 439 aa13.31□□□□□ -0.28
SNU13-208ENST00000488571 GRB10Q13322 594 aa13.31□□□□□ -0.28
SNU13-208ENST00000488571 SKIV2LQ15477 1246 aaKnown RBP13.31□□□□□ -0.28
SNU13-208ENST00000488571 LY6KQ17RY6 165 aa13.31□□□□□ -0.28
SNU13-208ENST00000488571 AAK1Q2M2I8 961 aa13.31□□□□□ -0.28
SNU13-208ENST00000488571 GDF6Q6KF10 455 aaPredicted RBP13.31□□□□□ -0.28
SNU13-208ENST00000488571 MFSD6Q6ZSS7 791 aa13.31□□□□□ -0.28
SNU13-208ENST00000488571 SESTD1Q86VW0 696 aa13.31□□□□□ -0.28
SNU13-208ENST00000488571 TICAM2Q86XR7 235 aa13.31□□□□□ -0.28
SNU13-208ENST00000488571 DHX38Q92620 1227 aaKnown RBP13.31□□□□□ -0.28
SNU13-208ENST00000488571 TAAR1Q96RJ0 339 aa13.31□□□□□ -0.28
SNU13-208ENST00000488571 ZKSCAN3Q9BRR0 538 aa13.31□□□□□ -0.28
SNU13-208ENST00000488571 UBA5Q9GZZ9 404 aa13.31□□□□□ -0.28
SNU13-208ENST00000488571 NOD1Q9Y239 953 aa13.31□□□□□ -0.28
SNU13-208ENST00000488571 CCDC171Q6TFL3 1326 aa13.31□□□□□ -0.28
SNU13-208ENST00000488571 LCHNA4D1U4 455 aa13.3□□□□□ -0.28
SNU13-208ENST00000488571 TLL1O43897 1013 aa13.3□□□□□ -0.28
SNU13-208ENST00000488571 CHMP4BP1P59074 171 aa13.3□□□□□ -0.28
SNU13-208ENST00000488571 WDR5P61964 334 aaKnown RBP13.3□□□□□ -0.28
SNU13-208ENST00000488571 RBL2Q08999 1139 aa13.3□□□□□ -0.28
SNU13-208ENST00000488571 CDC37Q16543 378 aaPredicted RBP13.3□□□□□ -0.28
SNU13-208ENST00000488571 TCTN1Q2MV58 587 aa13.3□□□□□ -0.28
SNU13-208ENST00000488571 GPATCH4Q5T3I0 446 aaKnown RBP13.3□□□□□ -0.28
SNU13-208ENST00000488571 SEPT14Q6ZU15 432 aa13.3□□□□□ -0.28
SNU13-208ENST00000488571 TMCO2Q7Z6W1 182 aaPredicted RBP13.3□□□□□ -0.28
SNU13-208ENST00000488571 CAGE1Q8TC20 777 aa13.3□□□□□ -0.28
SNU13-208ENST00000488571 SYTL5Q8TDW5 730 aaPredicted RBP13.3□□□□□ -0.28
SNU13-208ENST00000488571 AFAP1L1Q8TED9 768 aa13.3□□□□□ -0.28
SNU13-208ENST00000488571 COG5Q9UP83 839 aa13.3□□□□□ -0.28
SNU13-208ENST00000488571 MYH6P13533 1939 aa13.29□□□□□ -0.28
SNU13-208ENST00000488571 B4DLN1 442 aa13.29□□□□□ -0.28
SNU13-208ENST00000488571 KIF28PB7ZC32 967 aa13.29□□□□□ -0.28
SNU13-208ENST00000488571 GH1P01241 217 aa13.29□□□□□ -0.28
SNU13-208ENST00000488571 SELPP16109 830 aa13.29□□□□□ -0.28
SNU13-208ENST00000488571 MRPL12P52815 198 aaKnown RBP13.29□□□□□ -0.28
SNU13-208ENST00000488571 DEFB103AP81534 67 aa13.29□□□□□ -0.28
SNU13-208ENST00000488571 DGKHQ86XP1 1220 aa13.29□□□□□ -0.28
SNU13-208ENST00000488571 ESR2Q92731 530 aa13.29□□□□□ -0.28
SNU13-208ENST00000488571 C1QTNF1Q9BXJ1 281 aa13.29□□□□□ -0.28
SNU13-208ENST00000488571 MAF1Q9H063 256 aa13.29□□□□□ -0.28
SNU13-208ENST00000488571 NBNO60934 754 aa13.28□□□□□ -0.28
SNU13-208ENST00000488571 CXCL10P02778 98 aa13.28□□□□□ -0.28
SNU13-208ENST00000488571 PLA2G5P39877 138 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms