RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 USP17L8P0C7I0 530 aa15.72■□□□□ 0.11
RER1-207ENST00000488353 NR1D1P20393 614 aa15.72■□□□□ 0.11
RER1-207ENST00000488353 PRCPP42785 496 aa15.72■□□□□ 0.11
RER1-207ENST00000488353 MATR3P43243 847 aaKnown RBP eCLIP15.72■□□□□ 0.11
RER1-207ENST00000488353 PFKFB3Q16875 520 aaPredicted RBP15.72■□□□□ 0.11
RER1-207ENST00000488353 GLE1Q53GS7 698 aaKnown RBP15.72■□□□□ 0.11
RER1-207ENST00000488353 CCDC181Q5TID7 509 aa15.72■□□□□ 0.11
RER1-207ENST00000488353 RETREG2Q8NC44 543 aa15.72■□□□□ 0.11
RER1-207ENST00000488353 CENPHQ9H3R5 247 aa15.72■□□□□ 0.11
RER1-207ENST00000488353 ACTR5Q9H9F9 607 aaPredicted RBP15.72■□□□□ 0.11
RER1-207ENST00000488353 SLC40A1Q9NP59 571 aa15.72■□□□□ 0.11
RER1-207ENST00000488353 MCM9Q9NXL9 1143 aa15.72■□□□□ 0.11
RER1-207ENST00000488353 FAM205AQ6ZU69 1335 aa15.72■□□□□ 0.11
RER1-207ENST00000488353 PP2D1A8MPX8 630 aa15.72■□□□□ 0.11
RER1-207ENST00000488353 USO1O60763 962 aaKnown RBP15.72■□□□□ 0.11
RER1-207ENST00000488353 LDHBP07195 334 aaKnown RBP15.72■□□□□ 0.11
RER1-207ENST00000488353 ADRA2BP18089 450 aa15.72■□□□□ 0.11
RER1-207ENST00000488353 TRIM21P19474 475 aaKnown RBP15.72■□□□□ 0.11
RER1-207ENST00000488353 MDH1P40925 334 aaKnown RBP15.72■□□□□ 0.11
RER1-207ENST00000488353 SPA17Q15506 151 aa15.72■□□□□ 0.11
RER1-207ENST00000488353 HAUS3Q68CZ6 603 aa15.72■□□□□ 0.11
RER1-207ENST00000488353 C1orf131Q8NDD1 294 aaKnown RBP15.72■□□□□ 0.11
RER1-207ENST00000488353 RASSF8Q8NHQ8 419 aa15.72■□□□□ 0.11
RER1-207ENST00000488353 LEMD3Q9Y2U8 911 aa15.72■□□□□ 0.11
RER1-207ENST00000488353 MYH10P35580 1976 aa15.72■□□□□ 0.11
RER1-207ENST00000488353 DLEC1Q9Y238 1755 aa15.72■□□□□ 0.11
RER1-207ENST00000488353 UFL1O94874 794 aa15.71■□□□□ 0.11
RER1-207ENST00000488353 STAT6P42226 847 aa15.71■□□□□ 0.11
RER1-207ENST00000488353 PAFAH1B1P43034 410 aa15.71■□□□□ 0.11
RER1-207ENST00000488353 CRYMQ14894 314 aa15.71■□□□□ 0.11
RER1-207ENST00000488353 SNCBQ16143 134 aa15.71■□□□□ 0.11
RER1-207ENST00000488353 C8orf74Q6P047 294 aa15.71■□□□□ 0.11
RER1-207ENST00000488353 C6orf89Q6UWU4 347 aa15.71■□□□□ 0.11
RER1-207ENST00000488353 CD302Q8IX05 232 aa15.71■□□□□ 0.11
RER1-207ENST00000488353 IFT20Q8IY31 132 aa15.71■□□□□ 0.11
RER1-207ENST00000488353 MAGEC3Q8TD91 643 aa15.71■□□□□ 0.11
RER1-207ENST00000488353 OSBPL9Q96SU4 736 aa15.71■□□□□ 0.11
RER1-207ENST00000488353 AGPAT5Q9NUQ2 364 aa15.71■□□□□ 0.11
RER1-207ENST00000488353 UBR3Q6ZT12 1888 aa15.71■□□□□ 0.11
RER1-207ENST00000488353 ZNF233A6NK53 670 aa15.71■□□□□ 0.1
RER1-207ENST00000488353 PPP1R12AO14974 1030 aaPredicted RBP15.71■□□□□ 0.1
RER1-207ENST00000488353 ORC4O43929 436 aa15.71■□□□□ 0.1
RER1-207ENST00000488353 ERCC3P19447 782 aa15.71■□□□□ 0.1
RER1-207ENST00000488353 ZBED6P86452 979 aa15.71■□□□□ 0.1
RER1-207ENST00000488353 CDK17Q00537 523 aa15.71■□□□□ 0.1
RER1-207ENST00000488353 CYP27A1Q02318 531 aa15.71■□□□□ 0.1
RER1-207ENST00000488353 STAG2Q8N3U4 1231 aa15.71■□□□□ 0.1
RER1-207ENST00000488353 CCDC114Q96M63 670 aa15.71■□□□□ 0.1
RER1-207ENST00000488353 TTYH3Q9C0H2 523 aa15.71■□□□□ 0.1
RER1-207ENST00000488353 HYOU1Q9Y4L1 999 aa15.71■□□□□ 0.1
RER1-207ENST00000488353 HDLBPQ00341 1268 aaKnown RBP15.7■□□□□ 0.1
RER1-207ENST00000488353 CCDC96Q2M329 555 aa15.7■□□□□ 0.1
RER1-207ENST00000488353 RCSD1Q6JBY9 416 aa15.7■□□□□ 0.1
RER1-207ENST00000488353 CCDC121Q6ZUS5 278 aa15.7■□□□□ 0.1
RER1-207ENST00000488353 KRT27Q7Z3Y8 459 aa15.7■□□□□ 0.1
RER1-207ENST00000488353 TEX11Q8IYF3 940 aa15.7■□□□□ 0.1
RER1-207ENST00000488353 BLIDQ8IZY5 108 aa15.7■□□□□ 0.1
RER1-207ENST00000488353 SH3RF3Q8TEJ3 882 aaPredicted RBP15.7■□□□□ 0.1
RER1-207ENST00000488353 EEF2KMTQ96G04 330 aa15.7■□□□□ 0.1
RER1-207ENST00000488353 CCDC43Q96MW1 224 aaKnown RBP15.7■□□□□ 0.1
RER1-207ENST00000488353 THAP9Q9H5L6 903 aa15.7■□□□□ 0.1
RER1-207ENST00000488353 ATP8A2Q9NTI2 1148 aa15.7■□□□□ 0.1
RER1-207ENST00000488353 MAGEC2Q9UBF1 373 aaPredicted RBP15.7■□□□□ 0.1
RER1-207ENST00000488353 SRGNP10124 158 aa15.7■□□□□ 0.1
RER1-207ENST00000488353 PCP11498 1178 aaKnown RBP15.7■□□□□ 0.1
RER1-207ENST00000488353 EZRP15311 586 aaKnown RBP15.7■□□□□ 0.1
RER1-207ENST00000488353 SEC24CP53992 1094 aa15.7■□□□□ 0.1
RER1-207ENST00000488353 MRPS25P82663 173 aaKnown RBP15.7■□□□□ 0.1
RER1-207ENST00000488353 TFAP4Q01664 338 aa15.7■□□□□ 0.1
RER1-207ENST00000488353 SPTY2D1Q68D10 685 aaPredicted RBP15.7■□□□□ 0.1
RER1-207ENST00000488353 ZNF804AQ7Z570 1209 aa15.7■□□□□ 0.1
RER1-207ENST00000488353 CEP57Q86XR8 500 aa15.7■□□□□ 0.1
RER1-207ENST00000488353 PARP9Q8IXQ6 854 aa15.7■□□□□ 0.1
RER1-207ENST00000488353 C4orf32Q8N8J7 132 aa15.7■□□□□ 0.1
RER1-207ENST00000488353 CCDC42Q96M95 316 aa15.7■□□□□ 0.1
RER1-207ENST00000488353 LRWD1Q9UFC0 647 aa15.7■□□□□ 0.1
RER1-207ENST00000488353 HMGB1P1B2RPK0 211 aaPredicted RBP15.69■□□□□ 0.1
RER1-207ENST00000488353 TRAPPC10P48553 1259 aa15.69■□□□□ 0.1
RER1-207ENST00000488353 PMS1P54277 932 aaKnown RBP15.69■□□□□ 0.1
RER1-207ENST00000488353 CRY2Q49AN0 593 aa15.69■□□□□ 0.1
RER1-207ENST00000488353 PPP4R3AQ6IN85 833 aa15.69■□□□□ 0.1
RER1-207ENST00000488353 C3orf20Q8ND61 904 aa15.69■□□□□ 0.1
RER1-207ENST00000488353 WDR66Q8TBY9 1149 aa15.69■□□□□ 0.1
RER1-207ENST00000488353 DYNLL2Q96FJ2 89 aa15.69■□□□□ 0.1
RER1-207ENST00000488353 ATP6V1G3Q96LB4 118 aa15.69■□□□□ 0.1
RER1-207ENST00000488353 CAPN6Q9Y6Q1 641 aa15.69■□□□□ 0.1
RER1-207ENST00000488353 CCDC88AQ3V6T2 1871 aa15.69■□□□□ 0.1
RER1-207ENST00000488353 E7EVH7 732 aa15.69■□□□□ 0.1
RER1-207ENST00000488353 LRCH2Q5VUJ6 765 aa15.69■□□□□ 0.1
RER1-207ENST00000488353 TYW1BQ6NUM6 668 aa15.69■□□□□ 0.1
RER1-207ENST00000488353 CYB5D1Q6P9G0 228 aa15.69■□□□□ 0.1
RER1-207ENST00000488353 ADSSL1Q8N142 457 aa15.69■□□□□ 0.1
RER1-207ENST00000488353 PROM2Q8N271 834 aa15.69■□□□□ 0.1
RER1-207ENST00000488353 MREGQ8N565 214 aa15.69■□□□□ 0.1
RER1-207ENST00000488353 TBC1D22AQ8WUA7 517 aa15.69■□□□□ 0.1
RER1-207ENST00000488353 ALS2CR12Q96Q35 445 aa15.69■□□□□ 0.1
RER1-207ENST00000488353 TMEM60Q9H2L4 133 aa15.69■□□□□ 0.1
RER1-207ENST00000488353 SH2D4AQ9H788 454 aa15.69■□□□□ 0.1
RER1-207ENST00000488353 EXOC1Q9NV70 894 aa15.69■□□□□ 0.1
RER1-207ENST00000488353 ARPP21Q9UBL0 812 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms