RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 VAT1LQ9HCJ6 419 aa13.07□□□□□ -0.32
VAMP7-206ENST00000488344 KLRF2D3W0D1 207 aa13.06□□□□□ -0.32
VAMP7-206ENST00000488344 ZBTB5O15062 677 aa13.06□□□□□ -0.32
VAMP7-206ENST00000488344 CFBP00751 764 aa13.06□□□□□ -0.32
VAMP7-206ENST00000488344 MMP3P08254 477 aa13.06□□□□□ -0.32
VAMP7-206ENST00000488344 HSD17B4P51659 736 aa13.06□□□□□ -0.32
VAMP7-206ENST00000488344 TJAP1Q5JTD0 557 aa13.06□□□□□ -0.32
VAMP7-206ENST00000488344 SESTD1Q86VW0 696 aa13.06□□□□□ -0.32
VAMP7-206ENST00000488344 PHOSPHO2Q8TCD6 241 aa13.06□□□□□ -0.32
VAMP7-206ENST00000488344 AFAP1L1Q8TED9 768 aa13.06□□□□□ -0.32
VAMP7-206ENST00000488344 AFG1LQ8WV93 481 aa13.06□□□□□ -0.32
VAMP7-206ENST00000488344 COPS5Q92905 334 aa13.06□□□□□ -0.32
VAMP7-206ENST00000488344 EMID1Q96A84 441 aaPredicted RBP13.06□□□□□ -0.32
VAMP7-206ENST00000488344 TAAR1Q96RJ0 339 aa13.06□□□□□ -0.32
VAMP7-206ENST00000488344 TSPYL2Q9H2G4 693 aaPredicted RBP13.06□□□□□ -0.32
VAMP7-206ENST00000488344 MRVI1Q9Y6F6 885 aa13.06□□□□□ -0.32
VAMP7-206ENST00000488344 KIF28PB7ZC32 967 aa13.05□□□□□ -0.32
VAMP7-206ENST00000488344 BAIAP3O94812 1187 aa13.05□□□□□ -0.32
VAMP7-206ENST00000488344 ARIH2O95376 493 aa13.05□□□□□ -0.32
VAMP7-206ENST00000488344 NR3C2P08235 984 aa13.05□□□□□ -0.32
VAMP7-206ENST00000488344 EIF2AK2P19525 551 aaKnown RBP13.05□□□□□ -0.32
VAMP7-206ENST00000488344 GHRHRQ02643 423 aa13.05□□□□□ -0.32
VAMP7-206ENST00000488344 ARHGAP1Q07960 439 aa13.05□□□□□ -0.32
VAMP7-206ENST00000488344 LAMC2Q13753 1193 aa13.05□□□□□ -0.32
VAMP7-206ENST00000488344 PTGISQ16647 500 aa13.05□□□□□ -0.32
VAMP7-206ENST00000488344 LY6KQ17RY6 165 aa13.05□□□□□ -0.32
VAMP7-206ENST00000488344 TMEM67Q5HYA8 995 aa13.05□□□□□ -0.32
VAMP7-206ENST00000488344 DEFB128Q7Z7B8 93 aa13.05□□□□□ -0.32
VAMP7-206ENST00000488344 FTOQ9C0B1 505 aaKnown RBP eCLIP13.05□□□□□ -0.32
VAMP7-206ENST00000488344 PXMP2Q9NR77 195 aa13.05□□□□□ -0.32
VAMP7-206ENST00000488344 PCDHA1Q9Y5I3 950 aa13.05□□□□□ -0.32
VAMP7-206ENST00000488344 LAMA4Q16363 1823 aa13.04□□□□□ -0.32
VAMP7-206ENST00000488344 IFIT3O14879 490 aaKnown RBP13.04□□□□□ -0.32
VAMP7-206ENST00000488344 IQCF3P0C7M6 154 aa13.04□□□□□ -0.32
VAMP7-206ENST00000488344 IGFBP4P22692 258 aa13.04□□□□□ -0.32
VAMP7-206ENST00000488344 CHMP4BP1P59074 171 aa13.04□□□□□ -0.32
VAMP7-206ENST00000488344 SEC23AQ15436 765 aa13.04□□□□□ -0.32
VAMP7-206ENST00000488344 CHST3Q7LGC8 479 aa13.04□□□□□ -0.32
VAMP7-206ENST00000488344 DHX37Q8IY37 1157 aaKnown RBP13.04□□□□□ -0.32
VAMP7-206ENST00000488344 C7orf31Q8N865 590 aa13.04□□□□□ -0.32
VAMP7-206ENST00000488344 IL27Q8NEV9 243 aa13.04□□□□□ -0.32
VAMP7-206ENST00000488344 NCOA7Q8NI08 942 aa13.04□□□□□ -0.32
VAMP7-206ENST00000488344 PPTC7Q8NI37 304 aa13.04□□□□□ -0.32
VAMP7-206ENST00000488344 ATXN2LQ8WWM7 1075 aaKnown RBP13.04□□□□□ -0.32
VAMP7-206ENST00000488344 TBC1D5Q92609 795 aa13.04□□□□□ -0.32
VAMP7-206ENST00000488344 MTMR8Q96EF0 704 aa13.04□□□□□ -0.32
VAMP7-206ENST00000488344 COL20A1Q9P218 1284 aa13.04□□□□□ -0.32
VAMP7-206ENST00000488344 THEGQ9P2T0 379 aa13.04□□□□□ -0.32
VAMP7-206ENST00000488344 MAD2L2Q9UI95 211 aa13.04□□□□□ -0.32
VAMP7-206ENST00000488344 YBX2Q9Y2T7 364 aaKnown RBP13.04□□□□□ -0.32
VAMP7-206ENST00000488344 LCTP09848 1927 aa13.03□□□□□ -0.32
VAMP7-206ENST00000488344 PALM3A6NDB9 673 aaPredicted RBP13.03□□□□□ -0.32
VAMP7-206ENST00000488344 GCOM1H8Y6P7 765 aaPredicted RBP13.03□□□□□ -0.32
VAMP7-206ENST00000488344 POLR2MP0CAP2 368 aa13.03□□□□□ -0.32
VAMP7-206ENST00000488344 TGFB3P10600 412 aa13.03□□□□□ -0.32
VAMP7-206ENST00000488344 GSPT1P15170 499 aaKnown RBP13.03□□□□□ -0.32
VAMP7-206ENST00000488344 CCND2P30279 289 aa13.03□□□□□ -0.32
VAMP7-206ENST00000488344 KCNJ6P48051 423 aa13.03□□□□□ -0.32
VAMP7-206ENST00000488344 GRM4Q14833 912 aa13.03□□□□□ -0.32
VAMP7-206ENST00000488344 WTAPQ15007 396 aa13.03□□□□□ -0.32
VAMP7-206ENST00000488344 STOX1Q6ZVD7 989 aa13.03□□□□□ -0.32
VAMP7-206ENST00000488344 STAG2Q8N3U4 1231 aa13.03□□□□□ -0.32
VAMP7-206ENST00000488344 PHF12Q96QT6 1004 aa13.03□□□□□ -0.32
VAMP7-206ENST00000488344 PDCD2LQ9BRP1 358 aa13.03□□□□□ -0.32
VAMP7-206ENST00000488344 DDX41Q9UJV9 622 aaKnown RBP13.03□□□□□ -0.32
VAMP7-206ENST00000488344 GTPBP6O43824 516 aaPredicted RBP13.02□□□□□ -0.33
VAMP7-206ENST00000488344 EFCAB14O75071 495 aa13.02□□□□□ -0.33
VAMP7-206ENST00000488344 PPFIA4O75335 1185 aa13.02□□□□□ -0.33
VAMP7-206ENST00000488344 STAM2O75886 525 aa13.02□□□□□ -0.33
VAMP7-206ENST00000488344 F2P00734 622 aa13.02□□□□□ -0.33
VAMP7-206ENST00000488344 CYP21A2P08686 494 aa13.02□□□□□ -0.33
VAMP7-206ENST00000488344 SELPP16109 830 aa13.02□□□□□ -0.33
VAMP7-206ENST00000488344 CHMLP26374 656 aa13.02□□□□□ -0.33
VAMP7-206ENST00000488344 RABGGTBP53611 331 aa13.02□□□□□ -0.33
VAMP7-206ENST00000488344 RBL2Q08999 1139 aa13.02□□□□□ -0.33
VAMP7-206ENST00000488344 GNPTABQ3T906 1256 aa13.02□□□□□ -0.33
VAMP7-206ENST00000488344 CYB5R4Q7L1T6 521 aa13.02□□□□□ -0.33
VAMP7-206ENST00000488344 LRRC8DQ7L1W4 858 aa13.02□□□□□ -0.33
VAMP7-206ENST00000488344 CATIPQ7Z7H3 387 aa13.02□□□□□ -0.33
VAMP7-206ENST00000488344 HOMER1Q86YM7 354 aa13.02□□□□□ -0.33
VAMP7-206ENST00000488344 USP38Q8NB14 1042 aa13.02□□□□□ -0.33
VAMP7-206ENST00000488344 PPM1EQ8WY54 764 aa13.02□□□□□ -0.33
VAMP7-206ENST00000488344 RIOX1Q9H6W3 641 aa13.02□□□□□ -0.33
VAMP7-206ENST00000488344 GTF2IRD1Q9UHL9 959 aa13.02□□□□□ -0.33
VAMP7-206ENST00000488344 UNC80Q8N2C7 3258 aa13.01□□□□□ -0.33
VAMP7-206ENST00000488344 PNMA6FA0A0J9YX94 578 aa13.01□□□□□ -0.33
VAMP7-206ENST00000488344 MYCLP12524 364 aaPredicted RBP13.01□□□□□ -0.33
VAMP7-206ENST00000488344 HOXD8P13378 290 aaPredicted RBP13.01□□□□□ -0.33
VAMP7-206ENST00000488344 PDE4AP27815 886 aa13.01□□□□□ -0.33
VAMP7-206ENST00000488344 KIF5BP33176 963 aa13.01□□□□□ -0.33
VAMP7-206ENST00000488344 PSEN2P49810 448 aa13.01□□□□□ -0.33
VAMP7-206ENST00000488344 MRPS5P82675 430 aaKnown RBP13.01□□□□□ -0.33
VAMP7-206ENST00000488344 PTK7Q13308 1070 aa13.01□□□□□ -0.33
VAMP7-206ENST00000488344 MFSD10Q14728 455 aa13.01□□□□□ -0.33
VAMP7-206ENST00000488344 PGM5Q15124 567 aa13.01□□□□□ -0.33
VAMP7-206ENST00000488344 GDF6Q6KF10 455 aaPredicted RBP13.01□□□□□ -0.33
VAMP7-206ENST00000488344 VSIG10LQ86VR7 867 aa13.01□□□□□ -0.33
VAMP7-206ENST00000488344 KAT2BQ92831 832 aa13.01□□□□□ -0.33
VAMP7-206ENST00000488344 VWCEQ96DN2 955 aa13.01□□□□□ -0.33
VAMP7-206ENST00000488344 SPATA33Q96N06 139 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms