RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 DDX20Q9UHI6 824 aaKnown RBP13.6□□□□□ -0.23
APTX-227ENST00000485479 PCDHA4Q9UN74 947 aa13.6□□□□□ -0.23
APTX-227ENST00000485479 ESYT2A0FGR8 921 aa13.59□□□□□ -0.23
APTX-227ENST00000485479 GNA11P29992 359 aa13.59□□□□□ -0.23
APTX-227ENST00000485479 STXBP2Q15833 593 aa13.59□□□□□ -0.23
APTX-227ENST00000485479 BLIDQ8IZY5 108 aa13.59□□□□□ -0.23
APTX-227ENST00000485479 MORC4Q8TE76 937 aa13.59□□□□□ -0.23
APTX-227ENST00000485479 DIS3LQ8TF46 1054 aaKnown RBP13.59□□□□□ -0.23
APTX-227ENST00000485479 LLPHQ9BRT6 129 aaKnown RBP13.59□□□□□ -0.23
APTX-227ENST00000485479 PCDH10Q9P2E7 1040 aa13.59□□□□□ -0.23
APTX-227ENST00000485479 AKR1A1P14550 325 aa13.58□□□□□ -0.24
APTX-227ENST00000485479 VSIG10LQ86VR7 867 aa13.58□□□□□ -0.24
APTX-227ENST00000485479 HSCBQ8IWL3 235 aa13.58□□□□□ -0.24
APTX-227ENST00000485479 MSL3Q8N5Y2 521 aaKnown RBP13.58□□□□□ -0.24
APTX-227ENST00000485479 C8orf76Q96K31 380 aa13.58□□□□□ -0.24
APTX-227ENST00000485479 WDR11Q9BZH6 1224 aa13.58□□□□□ -0.24
APTX-227ENST00000485479 SH3GLB2Q9NR46 395 aa13.58□□□□□ -0.24
APTX-227ENST00000485479 MAP3K20Q9NYL2 800 aaKnown RBP13.58□□□□□ -0.24
APTX-227ENST00000485479 TELO2Q9Y4R8 837 aa13.58□□□□□ -0.24
APTX-227ENST00000485479 FRMPD4Q14CM0 1322 aa13.58□□□□□ -0.24
APTX-227ENST00000485479 BTBD18B2RXH4 712 aa13.58□□□□□ -0.24
APTX-227ENST00000485479 M0R2N6 131 aa13.58□□□□□ -0.24
APTX-227ENST00000485479 TFRCP02786 760 aaKnown RBP13.58□□□□□ -0.24
APTX-227ENST00000485479 GJB1P08034 283 aa13.58□□□□□ -0.24
APTX-227ENST00000485479 ITGB5P18084 799 aa13.58□□□□□ -0.24
APTX-227ENST00000485479 CCND2P30279 289 aa13.58□□□□□ -0.24
APTX-227ENST00000485479 BEX3Q00994 111 aa13.58□□□□□ -0.24
APTX-227ENST00000485479 SP2Q02086 613 aa13.58□□□□□ -0.24
APTX-227ENST00000485479 TNFAIP2Q03169 654 aa13.58□□□□□ -0.24
APTX-227ENST00000485479 PIK3AP1Q6ZUJ8 805 aa13.58□□□□□ -0.24
APTX-227ENST00000485479 WASF1Q92558 559 aa13.58□□□□□ -0.24
APTX-227ENST00000485479 SMC3Q9UQE7 1217 aa13.58□□□□□ -0.24
APTX-227ENST00000485479 EDIL3O43854 480 aa13.57□□□□□ -0.24
APTX-227ENST00000485479 SGPL1O95470 568 aa13.57□□□□□ -0.24
APTX-227ENST00000485479 MMP1P03956 469 aa13.57□□□□□ -0.24
APTX-227ENST00000485479 HMGN5P82970 282 aaKnown RBP13.57□□□□□ -0.24
APTX-227ENST00000485479 ARHGAP4P98171 946 aa13.57□□□□□ -0.24
APTX-227ENST00000485479 SEMA3FQ13275 785 aa13.57□□□□□ -0.24
APTX-227ENST00000485479 CUL4AQ13619 759 aa13.57□□□□□ -0.24
APTX-227ENST00000485479 INF2Q27J81 1249 aa13.57□□□□□ -0.24
APTX-227ENST00000485479 DIS3L2Q8IYB7 885 aaKnown RBP13.57□□□□□ -0.24
APTX-227ENST00000485479 PPP1R13LQ8WUF5 828 aa13.57□□□□□ -0.24
APTX-227ENST00000485479 GJA10Q969M2 543 aa13.57□□□□□ -0.24
APTX-227ENST00000485479 IWS1Q96ST2 819 aa13.57□□□□□ -0.24
APTX-227ENST00000485479 VTA1Q9NP79 307 aa13.57□□□□□ -0.24
APTX-227ENST00000485479 XPNPEP3Q9NQH7 507 aa13.57□□□□□ -0.24
APTX-227ENST00000485479 FAM184BQ9ULE4 1060 aa13.57□□□□□ -0.24
APTX-227ENST00000485479 SYNRGQ9UMZ2 1314 aa13.57□□□□□ -0.24
APTX-227ENST00000485479 KIF28PB7ZC32 967 aa13.56□□□□□ -0.24
APTX-227ENST00000485479 TXNP10599 105 aaKnown RBP13.56□□□□□ -0.24
APTX-227ENST00000485479 RARBP10826 455 aa13.56□□□□□ -0.24
APTX-227ENST00000485479 XBP1P17861 261 aa13.56□□□□□ -0.24
APTX-227ENST00000485479 GJA8P48165 433 aa13.56□□□□□ -0.24
APTX-227ENST00000485479 SP4Q02446 784 aa13.56□□□□□ -0.24
APTX-227ENST00000485479 AP3B2Q13367 1082 aa13.56□□□□□ -0.24
APTX-227ENST00000485479 TRIM29Q14134 588 aa13.56□□□□□ -0.24
APTX-227ENST00000485479 PCNX4Q63HM2 1172 aa13.56□□□□□ -0.24
APTX-227ENST00000485479 TLK2Q86UE8 772 aa13.56□□□□□ -0.24
APTX-227ENST00000485479 TBCKQ8TEA7 893 aa13.56□□□□□ -0.24
APTX-227ENST00000485479 SNX21Q969T3 373 aa13.56□□□□□ -0.24
APTX-227ENST00000485479 MPHOSPH6Q99547 160 aaKnown RBP13.56□□□□□ -0.24
APTX-227ENST00000485479 MRVI1Q9Y6F6 885 aa13.56□□□□□ -0.24
APTX-227ENST00000485479 TNRC18O15417 2968 aaPredicted RBP13.56□□□□□ -0.24
APTX-227ENST00000485479 FAM86B1E9PN63 330 aa13.56□□□□□ -0.24
APTX-227ENST00000485479 WNT7AO00755 349 aa13.56□□□□□ -0.24
APTX-227ENST00000485479 DYNC1LI2O43237 492 aaPredicted RBP13.56□□□□□ -0.24
APTX-227ENST00000485479 EIF3JO75822 258 aaKnown RBP13.56□□□□□ -0.24
APTX-227ENST00000485479 FAM86B2P0C5J1 330 aa13.56□□□□□ -0.24
APTX-227ENST00000485479 C6orf222P0C671 652 aaPredicted RBP13.56□□□□□ -0.24
APTX-227ENST00000485479 KRT2P35908 639 aa13.56□□□□□ -0.24
APTX-227ENST00000485479 SREBF1P36956 1147 aa13.56□□□□□ -0.24
APTX-227ENST00000485479 SAMD3Q8N6K7 520 aa13.56□□□□□ -0.24
APTX-227ENST00000485479 BICD2Q8TD16 824 aa13.56□□□□□ -0.24
APTX-227ENST00000485479 GNEQ9Y223 722 aaKnown RBP13.56□□□□□ -0.24
APTX-227ENST00000485479 ATP9AO75110 1047 aa13.55□□□□□ -0.24
APTX-227ENST00000485479 TDP2O95551 362 aa13.55□□□□□ -0.24
APTX-227ENST00000485479 ATP2B1P20020 1258 aa13.55□□□□□ -0.24
APTX-227ENST00000485479 DAGLBQ8NCG7 672 aa13.55□□□□□ -0.24
APTX-227ENST00000485479 SCFD2Q8WU76 684 aa13.55□□□□□ -0.24
APTX-227ENST00000485479 FERMT2Q96AC1 680 aa13.55□□□□□ -0.24
APTX-227ENST00000485479 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.55□□□□□ -0.24
APTX-227ENST00000485479 RBAK-RBAKDNI3L0D1 243 aa13.54□□□□□ -0.24
APTX-227ENST00000485479 ARP10275 920 aa13.54□□□□□ -0.24
APTX-227ENST00000485479 UBA1P22314 1058 aaKnown RBP13.54□□□□□ -0.24
APTX-227ENST00000485479 ZNF76P36508 570 aa13.54□□□□□ -0.24
APTX-227ENST00000485479 CCDC62Q6P9F0 684 aa13.54□□□□□ -0.24
APTX-227ENST00000485479 FBXO18Q8NFZ0 1043 aa13.54□□□□□ -0.24
APTX-227ENST00000485479 CRYGNQ8WXF5 182 aa13.54□□□□□ -0.24
APTX-227ENST00000485479 INPP4AQ96PE3 977 aaPredicted RBP13.54□□□□□ -0.24
APTX-227ENST00000485479 CCDC194A0A1B0GVG4 234 aa13.54□□□□□ -0.24
APTX-227ENST00000485479 B4DLN1 442 aa13.54□□□□□ -0.24
APTX-227ENST00000485479 DDX39AO00148 427 aaKnown RBP13.54□□□□□ -0.24
APTX-227ENST00000485479 ADAMTS4O75173 837 aa13.54□□□□□ -0.24
APTX-227ENST00000485479 FOSP01100 380 aaPredicted RBP13.54□□□□□ -0.24
APTX-227ENST00000485479 HSP90AA1P07900 732 aaKnown RBP13.54□□□□□ -0.24
APTX-227ENST00000485479 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
APTX-227ENST00000485479 MTMR1Q13613 665 aa13.54□□□□□ -0.24
APTX-227ENST00000485479 NBR1Q14596 966 aa13.54□□□□□ -0.24
APTX-227ENST00000485479 TTLL4Q14679 1199 aa13.54□□□□□ -0.24
APTX-227ENST00000485479 LRRC41Q15345 812 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms