RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 CHST3Q7LGC8 479 aa23■■□□□ 1.27
HPS4-213ENST00000483631 VSIG10LQ86VR7 867 aa23■■□□□ 1.27
HPS4-213ENST00000483631 SESTD1Q86VW0 696 aa23■■□□□ 1.27
HPS4-213ENST00000483631 AFG1LQ8WV93 481 aa23■■□□□ 1.27
HPS4-213ENST00000483631 LZTS2Q9BRK4 669 aa23■■□□□ 1.27
HPS4-213ENST00000483631 SPZ1Q9BXG8 430 aa23■■□□□ 1.27
HPS4-213ENST00000483631 WNT8AQ9H1J5 351 aa23■■□□□ 1.27
HPS4-213ENST00000483631 LY9Q9HBG7 655 aa23■■□□□ 1.27
HPS4-213ENST00000483631 TRMT13Q9NUP7 481 aaKnown RBP23■■□□□ 1.27
HPS4-213ENST00000483631 UMODL1Q5DID0 1318 aa23■■□□□ 1.27
HPS4-213ENST00000483631 PITPNM1O00562 1244 aa22.99■■□□□ 1.27
HPS4-213ENST00000483631 TGFB3P10600 412 aa22.99■■□□□ 1.27
HPS4-213ENST00000483631 CASTP20810 708 aaKnown RBP22.99■■□□□ 1.27
HPS4-213ENST00000483631 LAMC2Q13753 1193 aa22.99■■□□□ 1.27
HPS4-213ENST00000483631 ZNF654Q8IZM8 581 aa22.99■■□□□ 1.27
HPS4-213ENST00000483631 CTCFLQ8NI51 663 aaPredicted RBP22.99■■□□□ 1.27
HPS4-213ENST00000483631 MRVI1Q9Y6F6 885 aa22.99■■□□□ 1.27
HPS4-213ENST00000483631 MYO9BQ13459 2157 aa22.99■■□□□ 1.27
HPS4-213ENST00000483631 RFC2P35250 354 aa22.98■■□□□ 1.27
HPS4-213ENST00000483631 LIFRP42702 1097 aa22.98■■□□□ 1.27
HPS4-213ENST00000483631 GNAQP50148 359 aa22.98■■□□□ 1.27
HPS4-213ENST00000483631 CCL23P55773 120 aa22.98■■□□□ 1.27
HPS4-213ENST00000483631 PGM5Q15124 567 aa22.98■■□□□ 1.27
HPS4-213ENST00000483631 NECTIN1Q15223 517 aa22.98■■□□□ 1.27
HPS4-213ENST00000483631 DGKDQ16760 1214 aa22.98■■□□□ 1.27
HPS4-213ENST00000483631 FAM47CQ5HY64 1035 aa22.98■■□□□ 1.27
HPS4-213ENST00000483631 PPTC7Q8NI37 304 aa22.98■■□□□ 1.27
HPS4-213ENST00000483631 TANC1Q9C0D5 1861 aa22.98■■□□□ 1.27
HPS4-213ENST00000483631 SLC27A2O14975 620 aa22.97■■□□□ 1.27
HPS4-213ENST00000483631 PRC1O43663 620 aa22.97■■□□□ 1.27
HPS4-213ENST00000483631 HOXD8P13378 290 aaPredicted RBP22.97■■□□□ 1.27
HPS4-213ENST00000483631 TIFAQ96CG3 184 aa22.97■■□□□ 1.27
HPS4-213ENST00000483631 KATNAL1Q9BW62 490 aa22.97■■□□□ 1.27
HPS4-213ENST00000483631 STAM2O75886 525 aa22.96■■□□□ 1.27
HPS4-213ENST00000483631 CALM1P0DP23 149 aa22.96■■□□□ 1.27
HPS4-213ENST00000483631 CALM2P0DP24 149 aa22.96■■□□□ 1.27
HPS4-213ENST00000483631 CALM3P0DP25 149 aa22.96■■□□□ 1.27
HPS4-213ENST00000483631 CYP2C9P11712 490 aa22.96■■□□□ 1.27
HPS4-213ENST00000483631 CCND2P30279 289 aa22.96■■□□□ 1.27
HPS4-213ENST00000483631 HOXA13P31271 388 aaPredicted RBP22.96■■□□□ 1.27
HPS4-213ENST00000483631 BFSP2Q13515 415 aa22.96■■□□□ 1.27
HPS4-213ENST00000483631 RAB30Q15771 203 aa22.96■■□□□ 1.27
HPS4-213ENST00000483631 FRMPD4Q14CM0 1322 aa22.96■■□□□ 1.27
HPS4-213ENST00000483631 TRIP12Q14669 1992 aaPredicted RBP22.96■■□□□ 1.27
HPS4-213ENST00000483631 SH2B2O14492 632 aaPredicted RBP22.95■■□□□ 1.26
HPS4-213ENST00000483631 RGS20O76081 388 aa22.95■■□□□ 1.26
HPS4-213ENST00000483631 RNF20Q5VTR2 975 aa22.95■■□□□ 1.26
HPS4-213ENST00000483631 CREB3L3Q68CJ9 461 aa22.95■■□□□ 1.26
HPS4-213ENST00000483631 CAGE1Q8TC20 777 aa22.95■■□□□ 1.26
HPS4-213ENST00000483631 KAT2BQ92831 832 aa22.95■■□□□ 1.26
HPS4-213ENST00000483631 RRP36Q96EU6 259 aaKnown RBP22.95■■□□□ 1.26
HPS4-213ENST00000483631 PBX4Q9BYU1 374 aa22.95■■□□□ 1.26
HPS4-213ENST00000483631 ZNF576Q9H609 170 aa22.95■■□□□ 1.26
HPS4-213ENST00000483631 CCDC69A6NI79 296 aa22.94■■□□□ 1.26
HPS4-213ENST00000483631 PPFIA4O75335 1185 aa22.94■■□□□ 1.26
HPS4-213ENST00000483631 MYCLP12524 364 aaPredicted RBP22.94■■□□□ 1.26
HPS4-213ENST00000483631 MYSM1Q5VVJ2 828 aa22.94■■□□□ 1.26
HPS4-213ENST00000483631 DHX37Q8IY37 1157 aaKnown RBP22.94■■□□□ 1.26
HPS4-213ENST00000483631 CCDC155Q8N6L0 562 aa22.94■■□□□ 1.26
HPS4-213ENST00000483631 RETREG2Q8NC44 543 aa22.94■■□□□ 1.26
HPS4-213ENST00000483631 VWCEQ96DN2 955 aa22.94■■□□□ 1.26
HPS4-213ENST00000483631 ANO2Q9NQ90 1003 aa22.94■■□□□ 1.26
HPS4-213ENST00000483631 CXXC1Q9P0U4 656 aaPredicted RBP22.94■■□□□ 1.26
HPS4-213ENST00000483631 NOD1Q9Y239 953 aa22.94■■□□□ 1.26
HPS4-213ENST00000483631 CUL9Q8IWT3 2517 aa22.94■■□□□ 1.26
HPS4-213ENST00000483631 SCN5AQ14524 2016 aa22.94■■□□□ 1.26
HPS4-213ENST00000483631 PIK3CDO00329 1044 aa22.93■■□□□ 1.26
HPS4-213ENST00000483631 F2P00734 622 aa22.93■■□□□ 1.26
HPS4-213ENST00000483631 RBL2Q08999 1139 aa22.93■■□□□ 1.26
HPS4-213ENST00000483631 CELF3Q5SZQ8 465 aaKnown RBP22.93■■□□□ 1.26
HPS4-213ENST00000483631 NFXL1Q6ZNB6 911 aa22.93■■□□□ 1.26
HPS4-213ENST00000483631 OTOP2Q7RTS6 562 aa22.93■■□□□ 1.26
HPS4-213ENST00000483631 SCLYQ96I15 445 aa22.93■■□□□ 1.26
HPS4-213ENST00000483631 SEC63Q9UGP8 760 aaKnown RBP22.93■■□□□ 1.26
HPS4-213ENST00000483631 MSRAQ9UJ68 235 aa22.93■■□□□ 1.26
HPS4-213ENST00000483631 GBF1Q92538 1859 aa22.93■■□□□ 1.26
HPS4-213ENST00000483631 HAS3O00219 553 aa22.92■■□□□ 1.26
HPS4-213ENST00000483631 PARNO95453 639 aaKnown RBP22.92■■□□□ 1.26
HPS4-213ENST00000483631 IQCF3P0C7M6 154 aa22.92■■□□□ 1.26
HPS4-213ENST00000483631 ACTN1P12814 892 aa22.92■■□□□ 1.26
HPS4-213ENST00000483631 FOSL2P15408 326 aa22.92■■□□□ 1.26
HPS4-213ENST00000483631 PTGISQ16647 500 aa22.92■■□□□ 1.26
HPS4-213ENST00000483631 GNPTABQ3T906 1256 aa22.92■■□□□ 1.26
HPS4-213ENST00000483631 XRRA1Q6P2D8 792 aa22.92■■□□□ 1.26
HPS4-213ENST00000483631 SGMS1Q86VZ5 419 aa22.92■■□□□ 1.26
HPS4-213ENST00000483631 FCHSD1Q86WN1 690 aa22.92■■□□□ 1.26
HPS4-213ENST00000483631 MAFAQ8NHW3 353 aaPredicted RBP22.92■■□□□ 1.26
HPS4-213ENST00000483631 IL31RAQ8NI17 732 aa22.92■■□□□ 1.26
HPS4-213ENST00000483631 MYLIPQ8WY64 445 aa22.92■■□□□ 1.26
HPS4-213ENST00000483631 GTF2IRD1Q9UHL9 959 aa22.92■■□□□ 1.26
HPS4-213ENST00000483631 SLC4A7Q9Y6M7 1214 aa22.92■■□□□ 1.26
HPS4-213ENST00000483631 CDH23Q9H251 3354 aa22.92■■□□□ 1.26
HPS4-213ENST00000483631 ICAM3P32942 547 aa22.91■■□□□ 1.26
HPS4-213ENST00000483631 AFAP1L1Q8TED9 768 aa22.91■■□□□ 1.26
HPS4-213ENST00000483631 CUL5Q93034 780 aa22.91■■□□□ 1.26
HPS4-213ENST00000483631 INPP4AQ96PE3 977 aaPredicted RBP22.91■■□□□ 1.26
HPS4-213ENST00000483631 MYL10Q9BUA6 226 aa22.91■■□□□ 1.26
HPS4-213ENST00000483631 SLC12A7Q9Y666 1083 aa22.91■■□□□ 1.26
HPS4-213ENST00000483631 TET1Q8NFU7 2136 aa22.9■■□□□ 1.26
HPS4-213ENST00000483631 GRXCR1A8MXD5 290 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms