RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 FBLN5Q9UBX5 448 aa8.12□□□□□ -1.11
COMMD3-212ENST00000479958 RAPGEFL1Q9UHV5 662 aa8.12□□□□□ -1.11
COMMD3-212ENST00000479958 ATF2P15336 505 aa8.12□□□□□ -1.11
COMMD3-212ENST00000479958 LIMS1P48059 325 aa8.12□□□□□ -1.11
COMMD3-212ENST00000479958 CYP4F3Q08477 520 aa8.12□□□□□ -1.11
COMMD3-212ENST00000479958 TESK1Q15569 626 aa8.12□□□□□ -1.11
COMMD3-212ENST00000479958 SF1Q15637 639 aaKnown RBP8.12□□□□□ -1.11
COMMD3-212ENST00000479958 MARCH10Q8NA82 808 aaPredicted RBP8.12□□□□□ -1.11
COMMD3-212ENST00000479958 ST13P5Q8NFI4 369 aaPredicted RBP8.12□□□□□ -1.11
COMMD3-212ENST00000479958 CPA5Q8WXQ8 436 aa8.12□□□□□ -1.11
COMMD3-212ENST00000479958 SEC14L1Q92503 715 aa8.12□□□□□ -1.11
COMMD3-212ENST00000479958 TANGO6Q9C0B7 1094 aa8.12□□□□□ -1.11
COMMD3-212ENST00000479958 PARD6AQ9NPB6 346 aa8.12□□□□□ -1.11
COMMD3-212ENST00000479958 COA3Q9Y2R0 106 aaPredicted RBP8.12□□□□□ -1.11
COMMD3-212ENST00000479958 A0A1W2PQU0 124 aa8.11□□□□□ -1.11
COMMD3-212ENST00000479958 FBLN1P23142 703 aa8.11□□□□□ -1.11
COMMD3-212ENST00000479958 BCL6P41182 706 aa8.11□□□□□ -1.11
COMMD3-212ENST00000479958 MAP4K2Q12851 820 aa8.11□□□□□ -1.11
COMMD3-212ENST00000479958 LSAMPQ13449 338 aa8.11□□□□□ -1.11
COMMD3-212ENST00000479958 TTLL10Q6ZVT0 673 aa8.11□□□□□ -1.11
COMMD3-212ENST00000479958 B3GNT8Q7Z7M8 397 aa8.11□□□□□ -1.11
COMMD3-212ENST00000479958 RIOX2Q8IUF8 465 aa8.11□□□□□ -1.11
COMMD3-212ENST00000479958 LINC01356Q8N9X3 169 aa8.11□□□□□ -1.11
COMMD3-212ENST00000479958 TMEM145Q8NBT3 493 aa8.11□□□□□ -1.11
COMMD3-212ENST00000479958 PCDH18Q9HCL0 1135 aa8.11□□□□□ -1.11
COMMD3-212ENST00000479958 TMEFF2Q9UIK5 374 aaPredicted RBP8.11□□□□□ -1.11
COMMD3-212ENST00000479958 PMF1-BGLAPU3KQ54 211 aa8.11□□□□□ -1.11
COMMD3-212ENST00000479958 TOP2BQ02880 1626 aa8.1□□□□□ -1.11
COMMD3-212ENST00000479958 FANCD2Q9BXW9 1451 aa8.1□□□□□ -1.11
COMMD3-212ENST00000479958 INHBBP09529 407 aa8.1□□□□□ -1.11
COMMD3-212ENST00000479958 PMLP29590 882 aa8.1□□□□□ -1.11
COMMD3-212ENST00000479958 PRSS53Q2L4Q9 553 aa8.1□□□□□ -1.11
COMMD3-212ENST00000479958 CCDC103Q8IW40 242 aa8.1□□□□□ -1.11
COMMD3-212ENST00000479958 RCBTB1Q8NDN9 531 aa8.1□□□□□ -1.11
COMMD3-212ENST00000479958 PCDHA2Q9Y5H9 948 aa8.1□□□□□ -1.11
COMMD3-212ENST00000479958 PRDM2Q13029 1718 aa8.09□□□□□ -1.11
COMMD3-212ENST00000479958 H7BY64 318 aa8.09□□□□□ -1.11
COMMD3-212ENST00000479958 SLC6A11P48066 632 aa8.09□□□□□ -1.11
COMMD3-212ENST00000479958 CACNB2Q08289 660 aaPredicted RBP8.09□□□□□ -1.11
COMMD3-212ENST00000479958 CHRNA2Q15822 529 aa8.09□□□□□ -1.11
COMMD3-212ENST00000479958 LRRC47Q8N1G4 583 aaKnown RBP8.09□□□□□ -1.11
COMMD3-212ENST00000479958 IER2Q9BTL4 223 aa8.09□□□□□ -1.11
COMMD3-212ENST00000479958 BCAS3Q9H6U6 928 aa8.09□□□□□ -1.11
COMMD3-212ENST00000479958 SIT1Q9Y3P8 196 aa8.09□□□□□ -1.11
COMMD3-212ENST00000479958 X6R8D5 127 aa8.09□□□□□ -1.11
COMMD3-212ENST00000479958 BIVM-ERCC5R4GMW8 1640 aa8.08□□□□□ -1.12
COMMD3-212ENST00000479958 CAPNS1P04632 268 aa8.08□□□□□ -1.12
COMMD3-212ENST00000479958 VMACQ2NL98 169 aa8.08□□□□□ -1.12
COMMD3-212ENST00000479958 SLC35F1Q5T1Q4 408 aa8.08□□□□□ -1.12
COMMD3-212ENST00000479958 SP8Q8IXZ3 490 aa8.08□□□□□ -1.12
COMMD3-212ENST00000479958 ZNF669Q96BR6 464 aaPredicted RBP8.08□□□□□ -1.12
COMMD3-212ENST00000479958 DDX11Q96FC9 970 aa8.08□□□□□ -1.12
COMMD3-212ENST00000479958 C8orf37Q96NL8 207 aa8.08□□□□□ -1.12
COMMD3-212ENST00000479958 AARSD1Q9BTE6 412 aaKnown RBP8.08□□□□□ -1.12
COMMD3-212ENST00000479958 ARNTLO00327 626 aa8.07□□□□□ -1.12
COMMD3-212ENST00000479958 GRIA2P42262 883 aa8.07□□□□□ -1.12
COMMD3-212ENST00000479958 NBPF6Q5VWK0 638 aa8.07□□□□□ -1.12
COMMD3-212ENST00000479958 LILRA6Q6PI73 481 aa8.07□□□□□ -1.12
COMMD3-212ENST00000479958 MILR1Q7Z6M3 343 aa8.07□□□□□ -1.12
COMMD3-212ENST00000479958 FNIP1Q8TF40 1166 aa8.07□□□□□ -1.12
COMMD3-212ENST00000479958 NBPF4Q96M43 638 aa8.07□□□□□ -1.12
COMMD3-212ENST00000479958 KCNC2Q96PR1 638 aa8.07□□□□□ -1.12
COMMD3-212ENST00000479958 HIRIP3Q9BW71 556 aaPredicted RBP8.07□□□□□ -1.12
COMMD3-212ENST00000479958 NGRNQ9NPE2 291 aaKnown RBP8.07□□□□□ -1.12
COMMD3-212ENST00000479958 SGSM2O43147 1006 aa8.06□□□□□ -1.12
COMMD3-212ENST00000479958 TRIM13O60858 407 aa8.06□□□□□ -1.12
COMMD3-212ENST00000479958 FPR2P25090 351 aa8.06□□□□□ -1.12
COMMD3-212ENST00000479958 RSPO2Q6UXX9 243 aaPredicted RBP8.06□□□□□ -1.12
COMMD3-212ENST00000479958 ETV3LQ6ZN32 361 aa8.06□□□□□ -1.12
COMMD3-212ENST00000479958 DPH6Q7L8W6 267 aa8.06□□□□□ -1.12
COMMD3-212ENST00000479958 ZC3H18Q86VM9 953 aaKnown RBP8.06□□□□□ -1.12
COMMD3-212ENST00000479958 Q8N1Y9 231 aa8.06□□□□□ -1.12
COMMD3-212ENST00000479958 SMARCC2Q8TAQ2 1214 aa8.06□□□□□ -1.12
COMMD3-212ENST00000479958 GPR27Q9NS67 375 aa8.06□□□□□ -1.12
COMMD3-212ENST00000479958 CLDND1Q9NY35 253 aa8.06□□□□□ -1.12
COMMD3-212ENST00000479958 PLA2G2DQ9UNK4 145 aa8.06□□□□□ -1.12
COMMD3-212ENST00000479958 NPFFR2Q9Y5X5 522 aa8.06□□□□□ -1.12
COMMD3-212ENST00000479958 LAMC3Q9Y6N6 1575 aa8.05□□□□□ -1.12
COMMD3-212ENST00000479958 TRAV20A0A0B4J274 112 aa8.05□□□□□ -1.12
COMMD3-212ENST00000479958 HGSO14964 777 aaPredicted RBP8.05□□□□□ -1.12
COMMD3-212ENST00000479958 DGKIO75912 1065 aa8.05□□□□□ -1.12
COMMD3-212ENST00000479958 FGFR1P11362 822 aa8.05□□□□□ -1.12
COMMD3-212ENST00000479958 HOXA5P20719 270 aa8.05□□□□□ -1.12
COMMD3-212ENST00000479958 MC3RP41968 323 aa8.05□□□□□ -1.12
COMMD3-212ENST00000479958 CTSWP56202 376 aa8.05□□□□□ -1.12
COMMD3-212ENST00000479958 DENND5AQ6IQ26 1287 aa8.05□□□□□ -1.12
COMMD3-212ENST00000479958 NSMFQ6X4W1 530 aa8.05□□□□□ -1.12
COMMD3-212ENST00000479958 C1orf159Q96HA4 380 aa8.05□□□□□ -1.12
COMMD3-212ENST00000479958 YIPF4Q9BSR8 244 aa8.05□□□□□ -1.12
COMMD3-212ENST00000479958 LUC7LQ9NQ29 371 aaKnown RBP8.05□□□□□ -1.12
COMMD3-212ENST00000479958 PALD1Q9ULE6 856 aa8.05□□□□□ -1.12
COMMD3-212ENST00000479958 PRODHO43272 600 aa8.04□□□□□ -1.12
COMMD3-212ENST00000479958 DLX3O60479 287 aa8.04□□□□□ -1.12
COMMD3-212ENST00000479958 MAFKO60675 156 aa8.04□□□□□ -1.12
COMMD3-212ENST00000479958 CYP2C8P10632 490 aa8.04□□□□□ -1.12
COMMD3-212ENST00000479958 LCP1P13796 627 aa8.04□□□□□ -1.12
COMMD3-212ENST00000479958 GTF2F1P35269 517 aaKnown RBP eCLIP8.04□□□□□ -1.12
COMMD3-212ENST00000479958 KCNC1P48547 511 aa8.04□□□□□ -1.12
COMMD3-212ENST00000479958 TTLL7Q6ZT98 887 aa8.04□□□□□ -1.12
COMMD3-212ENST00000479958 USP53Q70EK8 1073 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms