RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 P2RX5Q93086 422 aa10.81□□□□□ -0.68
CMC1-209ENST00000477739 CAPN7Q9Y6W3 813 aa10.81□□□□□ -0.68
CMC1-209ENST00000477739 NWD2Q9ULI1 1742 aa10.81□□□□□ -0.68
CMC1-209ENST00000477739 FAM237AA0A1B0GTK4 181 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 GOLGA6L10A6NI86 522 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 ORC4O43929 436 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 OR52Z1P0C646 297 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 BTDP43251 543 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 KRT79Q5XKE5 535 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 SRLQ86TD4 932 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 REXO1Q8N1G1 1221 aaKnown RBP10.8□□□□□ -0.68
CMC1-209ENST00000477739 ARL8AQ96BM9 186 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 NUDT12Q9BQG2 462 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 HAUS4Q9H6D7 363 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 DNAJC17Q9NVM6 304 aaKnown RBP10.8□□□□□ -0.68
CMC1-209ENST00000477739 E9PMD0 336 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 H7C1D1 291 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 GJC1P36383 396 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 DHX9Q08211 1270 aaKnown RBP10.8□□□□□ -0.68
CMC1-209ENST00000477739 PABPC4Q13310 644 aaKnown RBP eCLIP10.8□□□□□ -0.68
CMC1-209ENST00000477739 MFSD14BQ5SR56 506 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 TTBK2Q6IQ55 1244 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 EXOC4Q96A65 974 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 TMEM47Q9BQJ4 181 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 TMX4Q9H1E5 349 aaPredicted RBP10.8□□□□□ -0.68
CMC1-209ENST00000477739 GGT7Q9UJ14 662 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 AKAP11Q9UKA4 1901 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 E7EVH7 732 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 HEXIM1O94992 359 aaKnown RBP10.8□□□□□ -0.68
CMC1-209ENST00000477739 GTF2IP78347 998 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 CKAP4Q07065 602 aaKnown RBP10.8□□□□□ -0.68
CMC1-209ENST00000477739 TMEM266Q2M3C6 531 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 DPP8Q6V1X1 898 aaPredicted RBP10.8□□□□□ -0.68
CMC1-209ENST00000477739 SCLT1Q96NL6 688 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 PYM1Q9BRP8 204 aaKnown RBP10.8□□□□□ -0.68
CMC1-209ENST00000477739 NAA15Q9BXJ9 866 aaKnown RBP10.8□□□□□ -0.68
CMC1-209ENST00000477739 PACSIN1Q9BY11 444 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 IKZF4Q9H2S9 585 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 PCDHA4Q9UN74 947 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 KIAA1024Q9UPX6 916 aa10.8□□□□□ -0.68
CMC1-209ENST00000477739 LGALS16A8MUM7 142 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 TUBB4AP04350 444 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 DNM2P50570 870 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 ARHGAP44Q17R89 818 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 SLC10A5Q5PT55 438 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 LRRC31Q6UY01 552 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 C6orf50Q9HD87 102 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 GGA1Q9UJY5 639 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 PCDHA13Q9Y5I0 950 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.79□□□□□ -0.68
CMC1-209ENST00000477739 IVLP07476 585 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 SP4Q02446 784 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 GRAPQ13588 217 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 C12orf60Q5U649 245 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 GRAPLQ8TC17 118 aaPredicted RBP10.79□□□□□ -0.68
CMC1-209ENST00000477739 MGARPQ8TDB4 240 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 SELENOSQ9BQE4 189 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 CAPS2Q9BXY5 557 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 RBM12Q9NTZ6 932 aaKnown RBP10.79□□□□□ -0.68
CMC1-209ENST00000477739 NUP98P52948 1817 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 KRT13P13646 458 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 SSR1P43307 286 aaKnown RBP10.79□□□□□ -0.68
CMC1-209ENST00000477739 SLCO1A2P46721 670 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 CARSP49589 748 aaKnown RBP10.79□□□□□ -0.68
CMC1-209ENST00000477739 VPS41P49754 854 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 KLHL30Q0D2K2 578 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 FUT2Q10981 343 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 TSG101Q99816 390 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 ADAM33Q9BZ11 813 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 NDST4Q9H3R1 872 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 MLXIPLQ9NP71 852 aa10.79□□□□□ -0.68
CMC1-209ENST00000477739 PPP1R1BQ9UD71 204 aaPredicted RBP10.79□□□□□ -0.68
CMC1-209ENST00000477739 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.79□□□□□ -0.68
CMC1-209ENST00000477739 LRRN2O75325 713 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 PALMO75781 387 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 VAV2P52735 878 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 USP14P54578 494 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 IFT88Q13099 833 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 CDKAL1Q5VV42 579 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 DGKHQ86XP1 1220 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 OTUD6BQ8N6M0 293 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 FAM71BQ8TC56 605 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 CEP95Q96GE4 821 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 PCDHA6Q9UN73 950 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 LEMD3Q9Y2U8 911 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 PCDHA8Q9Y5H6 950 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 MYO5AQ9Y4I1 1855 aaKnown RBP10.78□□□□□ -0.68
CMC1-209ENST00000477739 CNTNAP4Q9C0A0 1308 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 TRAPPC10P48553 1259 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 PDXDC2PQ6P474 469 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 IRF2BP1Q8IU81 584 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 LBHD1Q9BQE6 289 aaPredicted RBP10.78□□□□□ -0.68
CMC1-209ENST00000477739 COL1A1P02452 1464 aaPredicted RBP10.78□□□□□ -0.68
CMC1-209ENST00000477739 ITGB4P16144 1822 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 CYTH3O43739 400 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 IFNAR2P48551 515 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 GJB7Q6PEY0 223 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 WDR59Q6PJI9 974 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 NEK8Q86SG6 692 aa10.78□□□□□ -0.68
CMC1-209ENST00000477739 ADSSL1Q8N142 457 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms