RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 ARMCX2Q7L311 632 aa17.49■□□□□ 0.39
SEC13-215ENST00000477547 TRMT44Q8IYL2 757 aaKnown RBP17.49■□□□□ 0.39
SEC13-215ENST00000477547 SLAIN1Q8ND83 568 aa17.49■□□□□ 0.39
SEC13-215ENST00000477547 TNFRSF25Q93038 417 aa17.49■□□□□ 0.39
SEC13-215ENST00000477547 DDX49Q9Y6V7 483 aaKnown RBP17.49■□□□□ 0.39
SEC13-215ENST00000477547 SYNGAP1Q96PV0 1343 aa17.49■□□□□ 0.39
SEC13-215ENST00000477547 B4DLN1 442 aa17.48■□□□□ 0.39
SEC13-215ENST00000477547 KIF28PB7ZC32 967 aa17.48■□□□□ 0.39
SEC13-215ENST00000477547 EDNRBP24530 442 aa17.48■□□□□ 0.39
SEC13-215ENST00000477547 CCND2P30279 289 aa17.48■□□□□ 0.39
SEC13-215ENST00000477547 SREBF1P36956 1147 aa17.48■□□□□ 0.39
SEC13-215ENST00000477547 PDE4DQ08499 809 aa17.48■□□□□ 0.39
SEC13-215ENST00000477547 NONOQ15233 471 aaKnown RBP eCLIP17.48■□□□□ 0.39
SEC13-215ENST00000477547 PIK3AP1Q6ZUJ8 805 aa17.48■□□□□ 0.39
SEC13-215ENST00000477547 MSL3Q8N5Y2 521 aaKnown RBP17.48■□□□□ 0.39
SEC13-215ENST00000477547 TINF2Q9BSI4 451 aa17.48■□□□□ 0.39
SEC13-215ENST00000477547 FOXP1Q9H334 677 aaPredicted RBP17.48■□□□□ 0.39
SEC13-215ENST00000477547 PRO3102Q9H379 93 aa17.48■□□□□ 0.39
SEC13-215ENST00000477547 FAM205CA6NFA0 338 aa17.47■□□□□ 0.39
SEC13-215ENST00000477547 STX6O43752 255 aa17.47■□□□□ 0.39
SEC13-215ENST00000477547 HMGCRP04035 888 aa17.47■□□□□ 0.39
SEC13-215ENST00000477547 NR3C2P08235 984 aa17.47■□□□□ 0.39
SEC13-215ENST00000477547 MYCLP12524 364 aaPredicted RBP17.47■□□□□ 0.39
SEC13-215ENST00000477547 ARHGAP4P98171 946 aa17.47■□□□□ 0.39
SEC13-215ENST00000477547 MAMDC4Q6UXC1 1216 aa17.47■□□□□ 0.39
SEC13-215ENST00000477547 PXYLP1Q8TE99 480 aa17.47■□□□□ 0.39
SEC13-215ENST00000477547 IWS1Q96ST2 819 aa17.47■□□□□ 0.39
SEC13-215ENST00000477547 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.47■□□□□ 0.39
SEC13-215ENST00000477547 GRK4P32298 578 aa17.47■□□□□ 0.39
SEC13-215ENST00000477547 CYP2C19P33261 490 aa17.47■□□□□ 0.39
SEC13-215ENST00000477547 INF2Q27J81 1249 aa17.47■□□□□ 0.39
SEC13-215ENST00000477547 EARS2Q5JPH6 523 aaKnown RBP17.47■□□□□ 0.39
SEC13-215ENST00000477547 MFSD14CQ5VZR4 134 aa17.47■□□□□ 0.39
SEC13-215ENST00000477547 PCNX4Q63HM2 1172 aa17.47■□□□□ 0.39
SEC13-215ENST00000477547 NOSTRINQ8IVI9 506 aa17.47■□□□□ 0.39
SEC13-215ENST00000477547 FBXO16Q8IX29 292 aaPredicted RBP17.47■□□□□ 0.39
SEC13-215ENST00000477547 MORC4Q8TE76 937 aa17.47■□□□□ 0.39
SEC13-215ENST00000477547 TBCKQ8TEA7 893 aa17.47■□□□□ 0.39
SEC13-215ENST00000477547 MTMR6Q9Y217 621 aa17.47■□□□□ 0.39
SEC13-215ENST00000477547 SOX1O00570 391 aaPredicted RBP17.46■□□□□ 0.38
SEC13-215ENST00000477547 EEPD1Q7L9B9 569 aa17.46■□□□□ 0.38
SEC13-215ENST00000477547 FERMT3Q86UX7 667 aa17.46■□□□□ 0.38
SEC13-215ENST00000477547 ZHX1Q9UKY1 873 aaPredicted RBP17.46■□□□□ 0.38
SEC13-215ENST00000477547 CNPY2Q9Y2B0 182 aa17.46■□□□□ 0.38
SEC13-215ENST00000477547 IGHA2P01877 340 aa17.45■□□□□ 0.38
SEC13-215ENST00000477547 INHAP05111 366 aa17.45■□□□□ 0.38
SEC13-215ENST00000477547 PRKAR2AP13861 404 aaKnown RBP17.45■□□□□ 0.38
SEC13-215ENST00000477547 U2AF2P26368 475 aaKnown RBP eCLIP17.45■□□□□ 0.38
SEC13-215ENST00000477547 TRIM32Q13049 653 aa17.45■□□□□ 0.38
SEC13-215ENST00000477547 STXBP2Q15833 593 aa17.45■□□□□ 0.38
SEC13-215ENST00000477547 XRRA1Q6P2D8 792 aa17.45■□□□□ 0.38
SEC13-215ENST00000477547 UBE2Q1Q7Z7E8 422 aa17.45■□□□□ 0.38
SEC13-215ENST00000477547 NEK8Q86SG6 692 aa17.45■□□□□ 0.38
SEC13-215ENST00000477547 CRYGNQ8WXF5 182 aa17.45■□□□□ 0.38
SEC13-215ENST00000477547 ZFP91Q96JP5 570 aaPredicted RBP17.45■□□□□ 0.38
SEC13-215ENST00000477547 VTA1Q9NP79 307 aa17.45■□□□□ 0.38
SEC13-215ENST00000477547 TCHHQ07283 1943 aa17.44■□□□□ 0.38
SEC13-215ENST00000477547 SNAI1O95863 264 aaPredicted RBP17.44■□□□□ 0.38
SEC13-215ENST00000477547 CYBAP13498 195 aa17.44■□□□□ 0.38
SEC13-215ENST00000477547 PDIA4P13667 645 aaKnown RBP17.44■□□□□ 0.38
SEC13-215ENST00000477547 MRPS9P82933 396 aaKnown RBP17.44■□□□□ 0.38
SEC13-215ENST00000477547 PKP1Q13835 747 aa17.44■□□□□ 0.38
SEC13-215ENST00000477547 VSIG10LQ86VR7 867 aa17.44■□□□□ 0.38
SEC13-215ENST00000477547 LRCH3Q96II8 777 aa17.44■□□□□ 0.38
SEC13-215ENST00000477547 ABHD16BQ9H3Z7 469 aa17.44■□□□□ 0.38
SEC13-215ENST00000477547 NOL7Q9UMY1 257 aaKnown RBP17.44■□□□□ 0.38
SEC13-215ENST00000477547 WDR81Q562E7 1941 aa17.43■□□□□ 0.38
SEC13-215ENST00000477547 STAM2O75886 525 aa17.43■□□□□ 0.38
SEC13-215ENST00000477547 CYP3A4P08684 503 aa17.43■□□□□ 0.38
SEC13-215ENST00000477547 CCL5P13501 91 aa17.43■□□□□ 0.38
SEC13-215ENST00000477547 ZNF76P36508 570 aa17.43■□□□□ 0.38
SEC13-215ENST00000477547 RESTQ13127 1097 aa17.43■□□□□ 0.38
SEC13-215ENST00000477547 LETM2Q2VYF4 491 aa17.43■□□□□ 0.38
SEC13-215ENST00000477547 GNPTABQ3T906 1256 aa17.43■□□□□ 0.38
SEC13-215ENST00000477547 FOXD4L5Q5VV16 416 aaPredicted RBP17.43■□□□□ 0.38
SEC13-215ENST00000477547 BRAPQ7Z569 592 aa17.43■□□□□ 0.38
SEC13-215ENST00000477547 FOXD4L4Q8WXT5 416 aaPredicted RBP17.43■□□□□ 0.38
SEC13-215ENST00000477547 IPO9Q96P70 1041 aaKnown RBP17.43■□□□□ 0.38
SEC13-215ENST00000477547 HTATIP2Q9BUP3 242 aa17.43■□□□□ 0.38
SEC13-215ENST00000477547 KATNBL1Q9H079 304 aa17.43■□□□□ 0.38
SEC13-215ENST00000477547 EIF3JO75822 258 aaKnown RBP17.42■□□□□ 0.38
SEC13-215ENST00000477547 TDP2O95551 362 aa17.42■□□□□ 0.38
SEC13-215ENST00000477547 ZSCAN22P10073 491 aaPredicted RBP17.42■□□□□ 0.38
SEC13-215ENST00000477547 GJA8P48165 433 aa17.42■□□□□ 0.38
SEC13-215ENST00000477547 CACNB2Q08289 660 aaPredicted RBP17.42■□□□□ 0.38
SEC13-215ENST00000477547 ACVR2BQ13705 512 aa17.42■□□□□ 0.38
SEC13-215ENST00000477547 SEPT14Q6ZU15 432 aa17.42■□□□□ 0.38
SEC13-215ENST00000477547 INPP4AQ96PE3 977 aaPredicted RBP17.42■□□□□ 0.38
SEC13-215ENST00000477547 RTEL1Q9NZ71 1219 aa17.42■□□□□ 0.38
SEC13-215ENST00000477547 NRBP1Q9UHY1 535 aa17.42■□□□□ 0.38
SEC13-215ENST00000477547 F13A1P00488 732 aa17.41■□□□□ 0.38
SEC13-215ENST00000477547 GJB1P08034 283 aa17.41■□□□□ 0.38
SEC13-215ENST00000477547 GCFC2P16383 781 aaKnown RBP17.41■□□□□ 0.38
SEC13-215ENST00000477547 ATP2B1P20020 1258 aa17.41■□□□□ 0.38
SEC13-215ENST00000477547 DDIT3P35638 169 aa17.41■□□□□ 0.38
SEC13-215ENST00000477547 USP11P51784 963 aa17.41■□□□□ 0.38
SEC13-215ENST00000477547 SETQ01105 290 aaPredicted RBP17.41■□□□□ 0.38
SEC13-215ENST00000477547 CEP55Q53EZ4 464 aa17.41■□□□□ 0.38
SEC13-215ENST00000477547 PRAMEF19Q5SWL8 479 aa17.41■□□□□ 0.38
SEC13-215ENST00000477547 MAP3K21Q5TCX8 1036 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms