RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 MS4A1P11836 297 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 ALADP13716 330 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 ALDH5A1P51649 535 aaPredicted RBP6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 HNRNPUQ00839 825 aaKnown RBP eCLIP6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 TFAP4Q01664 338 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 PDE4BQ07343 736 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 BAATQ14032 418 aaPredicted RBP6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 PWP2Q15269 919 aaKnown RBP6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 CSPP1Q1MSJ5 1256 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 NBPF20Q3BBV1 942 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 FAM47CQ5HY64 1035 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 TSHZ3Q63HK5 1081 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 RCSD1Q6JBY9 416 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 NFRKBQ6P4R8 1299 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 IFNL3Q8IZI9 196 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 OR6J1Q8NGC5 347 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 PPP1R13LQ8WUF5 828 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 CHMP4CQ96CF2 233 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 RANBP17Q9H2T7 1088 aaKnown RBP6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 CD320Q9NPF0 282 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 ADD3Q9UEY8 706 aaKnown RBP6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 STX8Q9UNK0 236 aa6.08□□□□□ -1.44
SNRNP40-204ENST00000474025 PTPRSQ13332 1948 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 A6NJR5 290 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 KIF28PB7ZC32 967 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 PI4K2BG5E9Z4 385 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 FOXP2O15409 715 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 HRO43593 1189 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 NMT2O60551 498 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 ZFYP08048 801 aaPredicted RBP6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 EDNRBP24530 442 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 NOVP48745 357 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 WDR5P61964 334 aaKnown RBP6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 PTPN11Q06124 597 aaPredicted RBP6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 PPARAQ07869 468 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 BFSP2Q13515 415 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 MFSD10Q14728 455 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 GPNMBQ14956 572 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 PPP2R5BQ15173 497 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 LRRFIP1Q32MZ4 808 aaKnown RBP6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 SLC30A10Q6XR72 485 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 RETREG2Q8NC44 543 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 CAGE1Q8TC20 777 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 GDPD5Q8WTR4 605 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 SCFD2Q8WU76 684 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 CLEC4DQ8WXI8 215 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 CTAGE1Q96RT6 745 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 SEC62Q99442 399 aaKnown RBP6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 NACAP1Q9BZK3 213 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 FTOQ9C0B1 505 aaKnown RBP eCLIP6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 NAPBQ9H115 298 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 UBE2ZQ9H832 354 aaPredicted RBP6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 IL17RBQ9NRM6 502 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 LMCD1Q9NZU5 365 aa6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.07□□□□□ -1.44
SNRNP40-204ENST00000474025 RAD50Q92878 1312 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 PTPDC1A2A3K4 754 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 TSPY2A6NKD2 308 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 NKRFO15226 690 aaKnown RBP eCLIP6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 KPNA6O60684 536 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 ARIH2O95376 493 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 SLC3A2P08195 630 aaKnown RBP6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 SLC16A2P36021 539 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 KCNJ6P48051 423 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 PSEN2P49810 448 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 DEFB103AP81534 67 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 PDE4DQ08499 809 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 RBL2Q08999 1139 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 CCDC96Q2M329 555 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 TCTN1Q2MV58 587 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 BRDTQ58F21 947 aaPredicted RBP6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 SYDE2Q5VT97 1194 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 DMRTA1Q5VZB9 504 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 TTBK2Q6IQ55 1244 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 BTNL9Q6UXG8 535 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 TMCO2Q7Z6W1 182 aaPredicted RBP6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 SESTD1Q86VW0 696 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 FAM178BQ8IXR5 827 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 AFAP1L1Q8TED9 768 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 DCAF4Q8WV16 495 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 DHX38Q92620 1227 aaKnown RBP6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 COPS5Q92905 334 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 DDX27Q96GQ7 796 aaKnown RBP6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 GPATCH3Q96I76 525 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 PRRX2Q99811 253 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 SUGCTQ9HAC7 445 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 INCENPQ9NQS7 918 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 MTUS1Q9ULD2 1270 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 MTMR7Q9Y216 660 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 NOD1Q9Y239 953 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 DMXL1Q9Y485 3027 aa6.06□□□□□ -1.44
SNRNP40-204ENST00000474025 ZNF318Q5VUA4 2279 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 LINC01553A4QN01 128 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 RBAK-RBAKDNI3L0D1 243 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 NBNO60934 754 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 GJB5O95377 273 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 CXCL10P02778 98 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 MMP3P08254 477 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 TXNP10599 105 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms