RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 GOLGA6L3A6NEY3 463 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 SMCO2A6NFE2 343 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 TMEM232C9JQI7 657 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 DNM1LO00429 736 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 CLK2P49760 499 aaKnown RBP10.39□□□□□ -0.75
PTPRE-207ENST00000471218 MRE11P49959 708 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 JAG1P78504 1218 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 GHRHRQ02643 423 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 SEMA3FQ13275 785 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 CDC37Q16543 378 aaPredicted RBP10.39□□□□□ -0.75
PTPRE-207ENST00000471218 QRICH1Q2TAL8 776 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 RESP18Q5W5W9 173 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 TYW1BQ6NUM6 668 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 KANK3Q6NY19 840 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 CATSPERGQ6ZRH7 1159 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 NEK8Q86SG6 692 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 FBXO11Q86XK2 927 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 HOMER1Q86YM7 354 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 CLEC10AQ8IUN9 316 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 ENGASEQ8NFI3 743 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 OXER1Q8TDS5 423 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 GPKOWQ92917 476 aaPredicted RBP eCLIP10.39□□□□□ -0.75
PTPRE-207ENST00000471218 AK8Q96MA6 479 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 UBA5Q9GZZ9 404 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 EMILIN3Q9NT22 766 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 DACT1Q9NYF0 836 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 FAM13BQ9NYF5 915 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.39□□□□□ -0.75
PTPRE-207ENST00000471218 DDX20Q9UHI6 824 aaKnown RBP10.39□□□□□ -0.75
PTPRE-207ENST00000471218 HOOK1Q9UJC3 728 aaKnown RBP10.39□□□□□ -0.75
PTPRE-207ENST00000471218 PCDHA6Q9UN73 950 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 HPSEQ9Y251 543 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 PCDHA8Q9Y5H6 950 aa10.39□□□□□ -0.75
PTPRE-207ENST00000471218 PFASO15067 1338 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 ABCB11O95342 1321 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 hCG_1642624A0A1W2PR95 340 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 POTEB2H3BUK9 544 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 DTNBO60941 627 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 SLURP2P0DP57 97 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 CNGA1P29973 690 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 LONP1P36776 959 aaKnown RBP10.38□□□□□ -0.75
PTPRE-207ENST00000471218 USP11P51784 963 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 OAZ1P54368 228 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 TRIM32Q13049 653 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 Q3C1V9 767 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 WDR78Q5VTH9 848 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 PPP4R3AQ6IN85 833 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 PIK3AP1Q6ZUJ8 805 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 KCTD1Q719H9 257 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 DPP9Q86TI2 863 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 FMR1NBQ8N0W7 255 aaPredicted RBP10.38□□□□□ -0.75
PTPRE-207ENST00000471218 MB21D1Q8N884 522 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 FSIP1Q8NA03 581 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 PRPF38AQ8NAV1 312 aaKnown RBP10.38□□□□□ -0.75
PTPRE-207ENST00000471218 ACER1Q8TDN7 264 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 CHAMP1Q96JM3 812 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 SENP6Q9GZR1 1112 aaPredicted RBP10.38□□□□□ -0.75
PTPRE-207ENST00000471218 PSTPIP2Q9H939 334 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 EHMT1Q9H9B1 1298 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 TXNRD2Q9NNW7 524 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 FBXO2Q9UK22 296 aaPredicted RBP10.38□□□□□ -0.75
PTPRE-207ENST00000471218 MRPL11Q9Y3B7 192 aaKnown RBP10.38□□□□□ -0.75
PTPRE-207ENST00000471218 PCDHA1Q9Y5I3 950 aa10.38□□□□□ -0.75
PTPRE-207ENST00000471218 KBTBD13C9JR72 458 aa10.37□□□□□ -0.75
PTPRE-207ENST00000471218 CCDC192P0DO97 292 aa10.37□□□□□ -0.75
PTPRE-207ENST00000471218 IKQ13123 557 aaPredicted RBP10.37□□□□□ -0.75
PTPRE-207ENST00000471218 SNW1Q13573 536 aaKnown RBP10.37□□□□□ -0.75
PTPRE-207ENST00000471218 GRB14Q14449 540 aa10.37□□□□□ -0.75
PTPRE-207ENST00000471218 COG2Q14746 738 aa10.37□□□□□ -0.75
PTPRE-207ENST00000471218 LRRC26Q2I0M4 334 aa10.37□□□□□ -0.75
PTPRE-207ENST00000471218 ZNF697Q5TEC3 545 aa10.37□□□□□ -0.75
PTPRE-207ENST00000471218 OLFML2BQ68BL8 750 aa10.37□□□□□ -0.75
PTPRE-207ENST00000471218 TTBK2Q6IQ55 1244 aa10.37□□□□□ -0.75
PTPRE-207ENST00000471218 ABRAQ8N0Z2 381 aa10.37□□□□□ -0.75
PTPRE-207ENST00000471218 FTOQ9C0B1 505 aaKnown RBP eCLIP10.37□□□□□ -0.75
PTPRE-207ENST00000471218 PORCNQ9H237 461 aa10.37□□□□□ -0.75
PTPRE-207ENST00000471218 TNMDQ9H2S6 317 aa10.37□□□□□ -0.75
PTPRE-207ENST00000471218 MAGEF1Q9HAY2 307 aa10.37□□□□□ -0.75
PTPRE-207ENST00000471218 PRR12Q9ULL5 1215 aa10.37□□□□□ -0.75
PTPRE-207ENST00000471218 MTMR7Q9Y216 660 aa10.37□□□□□ -0.75
PTPRE-207ENST00000471218 PCDHB6Q9Y5E3 794 aa10.37□□□□□ -0.75
PTPRE-207ENST00000471218 STK24Q9Y6E0 443 aa10.37□□□□□ -0.75
PTPRE-207ENST00000471218 TCHHQ07283 1943 aa10.37□□□□□ -0.75
PTPRE-207ENST00000471218 CYP3A7-CYP3A51PA0A087WV96 503 aa10.36□□□□□ -0.75
PTPRE-207ENST00000471218 ATP2A1O14983 1001 aa10.36□□□□□ -0.75
PTPRE-207ENST00000471218 TBX3O15119 743 aa10.36□□□□□ -0.75
PTPRE-207ENST00000471218 PPP1R11O60927 126 aaPredicted RBP10.36□□□□□ -0.75
PTPRE-207ENST00000471218 NR1I2O75469 434 aa10.36□□□□□ -0.75
PTPRE-207ENST00000471218 ICAM1P05362 532 aa10.36□□□□□ -0.75
PTPRE-207ENST00000471218 MYL1P05976 194 aa10.36□□□□□ -0.75
PTPRE-207ENST00000471218 LIG1P18858 919 aa10.36□□□□□ -0.75
PTPRE-207ENST00000471218 CYP3A7P24462 503 aa10.36□□□□□ -0.75
PTPRE-207ENST00000471218 CCND3P30281 292 aaPredicted RBP10.36□□□□□ -0.75
PTPRE-207ENST00000471218 TXLNAP40222 546 aa10.36□□□□□ -0.75
PTPRE-207ENST00000471218 SYKP43405 635 aa10.36□□□□□ -0.75
PTPRE-207ENST00000471218 MDM2Q00987 491 aaPredicted RBP10.36□□□□□ -0.75
PTPRE-207ENST00000471218 CEBPZQ03701 1054 aaKnown RBP10.36□□□□□ -0.75
PTPRE-207ENST00000471218 FAM83BQ5T0W9 1011 aa10.36□□□□□ -0.75
PTPRE-207ENST00000471218 RASGRP2Q7LDG7 609 aa10.36□□□□□ -0.75
PTPRE-207ENST00000471218 MCF2L2Q86YR7 1114 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms