RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.41□□□□□ -0.1
SPTLC1-204ENST00000469778 KCNJ14Q9UNX9 436 aa14.41□□□□□ -0.1
SPTLC1-204ENST00000469778 ZSWIM8A7E2V4 1837 aa14.41□□□□□ -0.1
SPTLC1-204ENST00000469778 H3BQV1 296 aa14.4□□□□□ -0.1
SPTLC1-204ENST00000469778 DUSP11O75319 330 aaKnown RBP14.4□□□□□ -0.1
SPTLC1-204ENST00000469778 MYCLP12524 364 aaPredicted RBP14.4□□□□□ -0.1
SPTLC1-204ENST00000469778 CIITAP33076 1130 aa14.4□□□□□ -0.1
SPTLC1-204ENST00000469778 ARHGAP4P98171 946 aa14.4□□□□□ -0.1
SPTLC1-204ENST00000469778 NONOQ15233 471 aaKnown RBP eCLIP14.4□□□□□ -0.1
SPTLC1-204ENST00000469778 CCDC144BQ3MJ40 725 aa14.4□□□□□ -0.1
SPTLC1-204ENST00000469778 IFFO2Q5TF58 517 aa14.4□□□□□ -0.1
SPTLC1-204ENST00000469778 TAPT1Q6NXT6 567 aa14.4□□□□□ -0.1
SPTLC1-204ENST00000469778 MOXD1Q6UVY6 613 aa14.4□□□□□ -0.1
SPTLC1-204ENST00000469778 GPRASP2Q96D09 838 aa14.4□□□□□ -0.1
SPTLC1-204ENST00000469778 SHISA4Q96DD7 197 aa14.4□□□□□ -0.1
SPTLC1-204ENST00000469778 INPP4AQ96PE3 977 aaPredicted RBP14.4□□□□□ -0.1
SPTLC1-204ENST00000469778 SENP7Q9BQF6 1050 aa14.4□□□□□ -0.1
SPTLC1-204ENST00000469778 SPC25Q9HBM1 224 aa14.4□□□□□ -0.1
SPTLC1-204ENST00000469778 DDX20Q9UHI6 824 aaKnown RBP14.4□□□□□ -0.1
SPTLC1-204ENST00000469778 ZHX1Q9UKY1 873 aaPredicted RBP14.4□□□□□ -0.1
SPTLC1-204ENST00000469778 PLXNA1Q9UIW2 1896 aa14.4□□□□□ -0.1
SPTLC1-204ENST00000469778 RBBP6Q7Z6E9 1792 aaKnown RBP14.39□□□□□ -0.11
SPTLC1-204ENST00000469778 SPATA31C2B4DYI2 1134 aa14.39□□□□□ -0.11
SPTLC1-204ENST00000469778 FIBPO43427 364 aa14.39□□□□□ -0.11
SPTLC1-204ENST00000469778 RARBP10826 455 aa14.39□□□□□ -0.11
SPTLC1-204ENST00000469778 GCFC2P16383 781 aaKnown RBP14.39□□□□□ -0.11
SPTLC1-204ENST00000469778 U2AF2P26368 475 aaKnown RBP eCLIP14.39□□□□□ -0.11
SPTLC1-204ENST00000469778 CNGA1P29973 690 aa14.39□□□□□ -0.11
SPTLC1-204ENST00000469778 ZNF76P36508 570 aa14.39□□□□□ -0.11
SPTLC1-204ENST00000469778 NKX3-2P78367 333 aa14.39□□□□□ -0.11
SPTLC1-204ENST00000469778 MRPS9P82933 396 aaKnown RBP14.39□□□□□ -0.11
SPTLC1-204ENST00000469778 TNFAIP2Q03169 654 aa14.39□□□□□ -0.11
SPTLC1-204ENST00000469778 DUSP28Q4G0W2 176 aa14.39□□□□□ -0.11
SPTLC1-204ENST00000469778 CEP55Q53EZ4 464 aa14.39□□□□□ -0.11
SPTLC1-204ENST00000469778 DIS3L2Q8IYB7 885 aaKnown RBP14.39□□□□□ -0.11
SPTLC1-204ENST00000469778 ARRDC4Q8NCT1 418 aa14.39□□□□□ -0.11
SPTLC1-204ENST00000469778 TRPV1Q8NER1 839 aa14.39□□□□□ -0.11
SPTLC1-204ENST00000469778 ABHD8Q96I13 439 aa14.39□□□□□ -0.11
SPTLC1-204ENST00000469778 UNC93B1Q9H1C4 597 aa14.39□□□□□ -0.11
SPTLC1-204ENST00000469778 JADE2Q9NQC1 790 aa14.39□□□□□ -0.11
SPTLC1-204ENST00000469778 UBIAD1Q9Y5Z9 338 aa14.39□□□□□ -0.11
SPTLC1-204ENST00000469778 CYP3A7-CYP3A51PA0A087WV96 503 aa14.38□□□□□ -0.11
SPTLC1-204ENST00000469778 MEIS1O00470 390 aa14.38□□□□□ -0.11
SPTLC1-204ENST00000469778 SGPL1O95470 568 aa14.38□□□□□ -0.11
SPTLC1-204ENST00000469778 CYP3A7P24462 503 aa14.38□□□□□ -0.11
SPTLC1-204ENST00000469778 CCND3P30281 292 aaPredicted RBP14.38□□□□□ -0.11
SPTLC1-204ENST00000469778 GJA8P48165 433 aa14.38□□□□□ -0.11
SPTLC1-204ENST00000469778 TRAPPC10P48553 1259 aa14.38□□□□□ -0.11
SPTLC1-204ENST00000469778 SETQ01105 290 aaPredicted RBP14.38□□□□□ -0.11
SPTLC1-204ENST00000469778 TRIM32Q13049 653 aa14.38□□□□□ -0.11
SPTLC1-204ENST00000469778 ORC2Q13416 577 aaPredicted RBP14.38□□□□□ -0.11
SPTLC1-204ENST00000469778 GNL2Q13823 731 aaKnown RBP14.38□□□□□ -0.11
SPTLC1-204ENST00000469778 NEDD9Q14511 834 aa14.38□□□□□ -0.11
SPTLC1-204ENST00000469778 BRDTQ58F21 947 aaPredicted RBP14.38□□□□□ -0.11
SPTLC1-204ENST00000469778 PRAMEF19Q5SWL8 479 aa14.38□□□□□ -0.11
SPTLC1-204ENST00000469778 CCDC62Q6P9F0 684 aa14.38□□□□□ -0.11
SPTLC1-204ENST00000469778 ANKLE1Q8NAG6 615 aa14.38□□□□□ -0.11
SPTLC1-204ENST00000469778 MXRA8Q9BRK3 442 aa14.38□□□□□ -0.11
SPTLC1-204ENST00000469778 WDR11Q9BZH6 1224 aa14.38□□□□□ -0.11
SPTLC1-204ENST00000469778 CRISPLD2Q9H0B8 497 aa14.38□□□□□ -0.11
SPTLC1-204ENST00000469778 TMEM260Q9NX78 707 aa14.38□□□□□ -0.11
SPTLC1-204ENST00000469778 BTBD18B2RXH4 712 aa14.37□□□□□ -0.11
SPTLC1-204ENST00000469778 KPNA6O60684 536 aa14.37□□□□□ -0.11
SPTLC1-204ENST00000469778 TXNP10599 105 aaKnown RBP14.37□□□□□ -0.11
SPTLC1-204ENST00000469778 MTMR1Q13613 665 aa14.37□□□□□ -0.11
SPTLC1-204ENST00000469778 LAMC2Q13753 1193 aa14.37□□□□□ -0.11
SPTLC1-204ENST00000469778 LHX8Q68G74 356 aa14.37□□□□□ -0.11
SPTLC1-204ENST00000469778 PPP4R3AQ6IN85 833 aa14.37□□□□□ -0.11
SPTLC1-204ENST00000469778 SEPT14Q6ZU15 432 aa14.37□□□□□ -0.11
SPTLC1-204ENST00000469778 NEK8Q86SG6 692 aa14.37□□□□□ -0.11
SPTLC1-204ENST00000469778 NOSTRINQ8IVI9 506 aa14.37□□□□□ -0.11
SPTLC1-204ENST00000469778 FBXO16Q8IX29 292 aaPredicted RBP14.37□□□□□ -0.11
SPTLC1-204ENST00000469778 TBCKQ8TEA7 893 aa14.37□□□□□ -0.11
SPTLC1-204ENST00000469778 TNFRSF25Q93038 417 aa14.37□□□□□ -0.11
SPTLC1-204ENST00000469778 EMID1Q96A84 441 aaPredicted RBP14.37□□□□□ -0.11
SPTLC1-204ENST00000469778 AP5M1Q9H0R1 490 aa14.37□□□□□ -0.11
SPTLC1-204ENST00000469778 GJB4Q9NTQ9 266 aa14.37□□□□□ -0.11
SPTLC1-204ENST00000469778 DDX41Q9UJV9 622 aaKnown RBP14.37□□□□□ -0.11
SPTLC1-204ENST00000469778 OGDHLQ9ULD0 1010 aa14.37□□□□□ -0.11
SPTLC1-204ENST00000469778 MRVI1Q9Y6F6 885 aa14.37□□□□□ -0.11
SPTLC1-204ENST00000469778 ITGB5P18084 799 aa14.36□□□□□ -0.11
SPTLC1-204ENST00000469778 ANP32AP39687 249 aaKnown RBP14.36□□□□□ -0.11
SPTLC1-204ENST00000469778 MTFR1Q15390 333 aa14.36□□□□□ -0.11
SPTLC1-204ENST00000469778 EEPD1Q7L9B9 569 aa14.36□□□□□ -0.11
SPTLC1-204ENST00000469778 RNF180Q86T96 592 aa14.36□□□□□ -0.11
SPTLC1-204ENST00000469778 IL31RAQ8NI17 732 aa14.36□□□□□ -0.11
SPTLC1-204ENST00000469778 U2AF1L4Q8WU68 220 aaKnown RBP14.36□□□□□ -0.11
SPTLC1-204ENST00000469778 MBOAT7Q96N66 472 aa14.36□□□□□ -0.11
SPTLC1-204ENST00000469778 DEFB118Q96PH6 123 aa14.36□□□□□ -0.11
SPTLC1-204ENST00000469778 TSEN34Q9BSV6 310 aaKnown RBP14.36□□□□□ -0.11
SPTLC1-204ENST00000469778 NOL7Q9UMY1 257 aaKnown RBP14.36□□□□□ -0.11
SPTLC1-204ENST00000469778 GNEQ9Y223 722 aaKnown RBP14.36□□□□□ -0.11
SPTLC1-204ENST00000469778 TBX3O15119 743 aa14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 ZEB2O60315 1214 aa14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 RGS20O76081 388 aa14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 GH1P01241 217 aa14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 TFRCP02786 760 aaKnown RBP14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 SMPD1P17405 629 aa14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 SYT1P21579 422 aa14.35□□□□□ -0.11
SPTLC1-204ENST00000469778 CST5P28325 142 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms