RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 RIOX1Q9H6W3 641 aa12.74□□□□□ -0.37
COL4A3-204ENST00000469504 VAT1LQ9HCJ6 419 aa12.74□□□□□ -0.37
COL4A3-204ENST00000469504 NOD1Q9Y239 953 aa12.74□□□□□ -0.37
COL4A3-204ENST00000469504 PCDHA1Q9Y5I3 950 aa12.74□□□□□ -0.37
COL4A3-204ENST00000469504 SLC4A7Q9Y6M7 1214 aa12.74□□□□□ -0.37
COL4A3-204ENST00000469504 SCN10AQ9Y5Y9 1956 aa12.74□□□□□ -0.37
COL4A3-204ENST00000469504 HAX1O00165 279 aa12.73□□□□□ -0.37
COL4A3-204ENST00000469504 STAM2O75886 525 aa12.73□□□□□ -0.37
COL4A3-204ENST00000469504 ARHGAP1Q07960 439 aa12.73□□□□□ -0.37
COL4A3-204ENST00000469504 GRM4Q14833 912 aa12.73□□□□□ -0.37
COL4A3-204ENST00000469504 WTAPQ15007 396 aa12.73□□□□□ -0.37
COL4A3-204ENST00000469504 SEPT14Q6ZU15 432 aa12.73□□□□□ -0.37
COL4A3-204ENST00000469504 CYB5R4Q7L1T6 521 aa12.73□□□□□ -0.37
COL4A3-204ENST00000469504 OTOP2Q7RTS6 562 aa12.73□□□□□ -0.37
COL4A3-204ENST00000469504 CATIPQ7Z7H3 387 aa12.73□□□□□ -0.37
COL4A3-204ENST00000469504 STAG2Q8N3U4 1231 aa12.73□□□□□ -0.37
COL4A3-204ENST00000469504 PPTC7Q8NI37 304 aa12.73□□□□□ -0.37
COL4A3-204ENST00000469504 PHOSPHO2Q8TCD6 241 aa12.73□□□□□ -0.37
COL4A3-204ENST00000469504 SP7Q8TDD2 431 aaPredicted RBP12.73□□□□□ -0.37
COL4A3-204ENST00000469504 AFG1LQ8WV93 481 aa12.73□□□□□ -0.37
COL4A3-204ENST00000469504 TBC1D5Q92609 795 aa12.73□□□□□ -0.37
COL4A3-204ENST00000469504 SYMPKQ92797 1274 aaKnown RBP12.73□□□□□ -0.37
COL4A3-204ENST00000469504 COPS5Q92905 334 aa12.73□□□□□ -0.37
COL4A3-204ENST00000469504 PDCD2LQ9BRP1 358 aa12.73□□□□□ -0.37
COL4A3-204ENST00000469504 SLC28A3Q9HAS3 691 aa12.73□□□□□ -0.37
COL4A3-204ENST00000469504 COL20A1Q9P218 1284 aa12.73□□□□□ -0.37
COL4A3-204ENST00000469504 DDX41Q9UJV9 622 aaKnown RBP12.73□□□□□ -0.37
COL4A3-204ENST00000469504 PCDHA11Q9Y5I1 949 aa12.73□□□□□ -0.37
COL4A3-204ENST00000469504 MRVI1Q9Y6F6 885 aa12.73□□□□□ -0.37
COL4A3-204ENST00000469504 PNMA6FA0A0J9YX94 578 aa12.72□□□□□ -0.37
COL4A3-204ENST00000469504 E7EWF7 191 aa12.72□□□□□ -0.37
COL4A3-204ENST00000469504 GCOM1H8Y6P7 765 aaPredicted RBP12.72□□□□□ -0.37
COL4A3-204ENST00000469504 BAIAP3O94812 1187 aa12.72□□□□□ -0.37
COL4A3-204ENST00000469504 IQCF3P0C7M6 154 aa12.72□□□□□ -0.37
COL4A3-204ENST00000469504 POLR2MP0CAP2 368 aa12.72□□□□□ -0.37
COL4A3-204ENST00000469504 CYP2C9P11712 490 aa12.72□□□□□ -0.37
COL4A3-204ENST00000469504 EIF2AK2P19525 551 aaKnown RBP12.72□□□□□ -0.37
COL4A3-204ENST00000469504 SMARCA1P28370 1054 aa12.72□□□□□ -0.37
COL4A3-204ENST00000469504 RBL2Q08999 1139 aa12.72□□□□□ -0.37
COL4A3-204ENST00000469504 TROAPQ12815 778 aa12.72□□□□□ -0.37
COL4A3-204ENST00000469504 LY6KQ17RY6 165 aa12.72□□□□□ -0.37
COL4A3-204ENST00000469504 VSIG10LQ86VR7 867 aa12.72□□□□□ -0.37
COL4A3-204ENST00000469504 TMTC2Q8N394 836 aa12.72□□□□□ -0.37
COL4A3-204ENST00000469504 AFAP1L1Q8TED9 768 aa12.72□□□□□ -0.37
COL4A3-204ENST00000469504 MAP4K1Q92918 833 aa12.72□□□□□ -0.37
COL4A3-204ENST00000469504 SCLYQ96I15 445 aa12.72□□□□□ -0.37
COL4A3-204ENST00000469504 SLC9A7Q96T83 725 aa12.72□□□□□ -0.37
COL4A3-204ENST00000469504 CXXC1Q9P0U4 656 aaPredicted RBP12.72□□□□□ -0.37
COL4A3-204ENST00000469504 ZBBXA8MT70 800 aa12.71□□□□□ -0.37
COL4A3-204ENST00000469504 GRXCR1A8MXD5 290 aa12.71□□□□□ -0.37
COL4A3-204ENST00000469504 OPLAHO14841 1288 aa12.71□□□□□ -0.37
COL4A3-204ENST00000469504 PPFIA4O75335 1185 aa12.71□□□□□ -0.37
COL4A3-204ENST00000469504 DDAH1O94760 285 aa12.71□□□□□ -0.37
COL4A3-204ENST00000469504 F2P00734 622 aa12.71□□□□□ -0.37
COL4A3-204ENST00000469504 HOXD8P13378 290 aaPredicted RBP12.71□□□□□ -0.37
COL4A3-204ENST00000469504 ATP2A2P16615 1042 aaKnown RBP12.71□□□□□ -0.37
COL4A3-204ENST00000469504 KIF5BP33176 963 aa12.71□□□□□ -0.37
COL4A3-204ENST00000469504 PBX2P40425 430 aa12.71□□□□□ -0.37
COL4A3-204ENST00000469504 PTH1RQ03431 593 aa12.71□□□□□ -0.37
COL4A3-204ENST00000469504 PTGISQ16647 500 aa12.71□□□□□ -0.37
COL4A3-204ENST00000469504 GNPTABQ3T906 1256 aa12.71□□□□□ -0.37
COL4A3-204ENST00000469504 DHX37Q8IY37 1157 aaKnown RBP12.71□□□□□ -0.37
COL4A3-204ENST00000469504 LZTS2Q9BRK4 669 aa12.71□□□□□ -0.37
COL4A3-204ENST00000469504 COL25A1Q9BXS0 654 aaPredicted RBP12.71□□□□□ -0.37
COL4A3-204ENST00000469504 GTF2IRD1Q9UHL9 959 aa12.71□□□□□ -0.37
COL4A3-204ENST00000469504 VCANP13611 3396 aa12.71□□□□□ -0.38
COL4A3-204ENST00000469504 CCND2P30279 289 aa12.7□□□□□ -0.38
COL4A3-204ENST00000469504 GNAQP50148 359 aa12.7□□□□□ -0.38
COL4A3-204ENST00000469504 PGM5Q15124 567 aa12.7□□□□□ -0.38
COL4A3-204ENST00000469504 TMEM67Q5HYA8 995 aa12.7□□□□□ -0.38
COL4A3-204ENST00000469504 CASC1Q6TDU7 716 aa12.7□□□□□ -0.38
COL4A3-204ENST00000469504 HOMER1Q86YM7 354 aa12.7□□□□□ -0.38
COL4A3-204ENST00000469504 C7orf31Q8N865 590 aa12.7□□□□□ -0.38
COL4A3-204ENST00000469504 CTCFLQ8NI51 663 aaPredicted RBP12.7□□□□□ -0.38
COL4A3-204ENST00000469504 VWCEQ96DN2 955 aa12.7□□□□□ -0.38
COL4A3-204ENST00000469504 FRMPD4Q14CM0 1322 aa12.69□□□□□ -0.38
COL4A3-204ENST00000469504 KIF28PB7ZC32 967 aa12.69□□□□□ -0.38
COL4A3-204ENST00000469504 HAS3O00219 553 aa12.69□□□□□ -0.38
COL4A3-204ENST00000469504 PPP1R11O60927 126 aaPredicted RBP12.69□□□□□ -0.38
COL4A3-204ENST00000469504 EFCAB14O75071 495 aa12.69□□□□□ -0.38
COL4A3-204ENST00000469504 SELPP16109 830 aa12.69□□□□□ -0.38
COL4A3-204ENST00000469504 CELF3Q5SZQ8 465 aaKnown RBP12.69□□□□□ -0.38
COL4A3-204ENST00000469504 MYSM1Q5VVJ2 828 aa12.69□□□□□ -0.38
COL4A3-204ENST00000469504 PPP2R2DQ66LE6 453 aa12.69□□□□□ -0.38
COL4A3-204ENST00000469504 XRRA1Q6P2D8 792 aa12.69□□□□□ -0.38
COL4A3-204ENST00000469504 CHST3Q7LGC8 479 aa12.69□□□□□ -0.38
COL4A3-204ENST00000469504 DEFB128Q7Z7B8 93 aa12.69□□□□□ -0.38
COL4A3-204ENST00000469504 MB21D2Q8IYB1 491 aaPredicted RBP12.69□□□□□ -0.38
COL4A3-204ENST00000469504 IGDCC4Q8TDY8 1250 aa12.69□□□□□ -0.38
COL4A3-204ENST00000469504 KAT2BQ92831 832 aa12.69□□□□□ -0.38
COL4A3-204ENST00000469504 TMEM87BQ96K49 555 aa12.69□□□□□ -0.38
COL4A3-204ENST00000469504 PIGSQ96S52 555 aa12.69□□□□□ -0.38
COL4A3-204ENST00000469504 SPZ1Q9BXG8 430 aa12.69□□□□□ -0.38
COL4A3-204ENST00000469504 NKX2-4Q9H2Z4 354 aa12.69□□□□□ -0.38
COL4A3-204ENST00000469504 RBM8AQ9Y5S9 174 aaKnown RBP12.69□□□□□ -0.38
COL4A3-204ENST00000469504 CYTH3O43739 400 aa12.68□□□□□ -0.38
COL4A3-204ENST00000469504 CALM1P0DP23 149 aa12.68□□□□□ -0.38
COL4A3-204ENST00000469504 CALM2P0DP24 149 aa12.68□□□□□ -0.38
COL4A3-204ENST00000469504 CALM3P0DP25 149 aa12.68□□□□□ -0.38
COL4A3-204ENST00000469504 MYCLP12524 364 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms