RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 CASTP20810 708 aaKnown RBP21.85■■□□□ 1.09
SF3A1-205ENST00000463818 PBX2P40425 430 aa21.85■■□□□ 1.09
SF3A1-205ENST00000463818 GRIN2CQ14957 1233 aa21.85■■□□□ 1.09
SF3A1-205ENST00000463818 CASC1Q6TDU7 716 aa21.85■■□□□ 1.09
SF3A1-205ENST00000463818 TIFAQ96CG3 184 aa21.85■■□□□ 1.09
SF3A1-205ENST00000463818 VWCEQ96DN2 955 aa21.85■■□□□ 1.09
SF3A1-205ENST00000463818 PBX4Q9BYU1 374 aa21.85■■□□□ 1.09
SF3A1-205ENST00000463818 MTIF3Q9H2K0 278 aaKnown RBP21.85■■□□□ 1.09
SF3A1-205ENST00000463818 LY9Q9HBG7 655 aa21.85■■□□□ 1.09
SF3A1-205ENST00000463818 DLL1O00548 723 aa21.84■■□□□ 1.09
SF3A1-205ENST00000463818 SLC27A2O14975 620 aa21.84■■□□□ 1.09
SF3A1-205ENST00000463818 PRC1O43663 620 aa21.84■■□□□ 1.09
SF3A1-205ENST00000463818 RGS20O76081 388 aa21.84■■□□□ 1.09
SF3A1-205ENST00000463818 FCHSD1Q86WN1 690 aa21.84■■□□□ 1.09
SF3A1-205ENST00000463818 ZNF654Q8IZM8 581 aa21.84■■□□□ 1.09
SF3A1-205ENST00000463818 KAT2BQ92831 832 aa21.84■■□□□ 1.09
SF3A1-205ENST00000463818 MAP3K14Q99558 947 aa21.84■■□□□ 1.09
SF3A1-205ENST00000463818 MTA3Q9BTC8 594 aa21.84■■□□□ 1.09
SF3A1-205ENST00000463818 MYL10Q9BUA6 226 aa21.84■■□□□ 1.09
SF3A1-205ENST00000463818 ZNF576Q9H609 170 aa21.84■■□□□ 1.09
SF3A1-205ENST00000463818 MCM5P33992 734 aa21.83■■□□□ 1.09
SF3A1-205ENST00000463818 LAMC2Q13753 1193 aa21.83■■□□□ 1.09
SF3A1-205ENST00000463818 PGM5Q15124 567 aa21.83■■□□□ 1.09
SF3A1-205ENST00000463818 DGKDQ16760 1214 aa21.83■■□□□ 1.09
SF3A1-205ENST00000463818 SKAP1Q86WV1 359 aa21.83■■□□□ 1.09
SF3A1-205ENST00000463818 DHX37Q8IY37 1157 aaKnown RBP21.83■■□□□ 1.09
SF3A1-205ENST00000463818 TMTC2Q8N394 836 aa21.83■■□□□ 1.09
SF3A1-205ENST00000463818 RETREG2Q8NC44 543 aa21.83■■□□□ 1.09
SF3A1-205ENST00000463818 IL31RAQ8NI17 732 aa21.83■■□□□ 1.09
SF3A1-205ENST00000463818 CTCFLQ8NI51 663 aaPredicted RBP21.83■■□□□ 1.09
SF3A1-205ENST00000463818 EMID1Q96A84 441 aaPredicted RBP21.83■■□□□ 1.09
SF3A1-205ENST00000463818 ZFP91Q96JP5 570 aaPredicted RBP21.83■■□□□ 1.09
SF3A1-205ENST00000463818 DDAH1O94760 285 aa21.82■■□□□ 1.08
SF3A1-205ENST00000463818 COL9A3Q14050 684 aaPredicted RBP21.82■■□□□ 1.08
SF3A1-205ENST00000463818 NECTIN1Q15223 517 aa21.82■■□□□ 1.08
SF3A1-205ENST00000463818 PTGISQ16647 500 aa21.82■■□□□ 1.08
SF3A1-205ENST00000463818 CREB3L3Q68CJ9 461 aa21.82■■□□□ 1.08
SF3A1-205ENST00000463818 NFXL1Q6ZNB6 911 aa21.82■■□□□ 1.08
SF3A1-205ENST00000463818 DEFB128Q7Z7B8 93 aa21.82■■□□□ 1.08
SF3A1-205ENST00000463818 MAFAQ8NHW3 353 aaPredicted RBP21.82■■□□□ 1.08
SF3A1-205ENST00000463818 MSRAQ9UJ68 235 aa21.82■■□□□ 1.08
SF3A1-205ENST00000463818 NOD1Q9Y239 953 aa21.82■■□□□ 1.08
SF3A1-205ENST00000463818 SH2B2O14492 632 aaPredicted RBP21.81■■□□□ 1.08
SF3A1-205ENST00000463818 FOSL2P15408 326 aa21.81■■□□□ 1.08
SF3A1-205ENST00000463818 CCND2P30279 289 aa21.81■■□□□ 1.08
SF3A1-205ENST00000463818 KIF5BP33176 963 aa21.81■■□□□ 1.08
SF3A1-205ENST00000463818 KCNV1Q6PIU1 500 aa21.81■■□□□ 1.08
SF3A1-205ENST00000463818 CENPQQ7L2Z9 268 aaPredicted RBP21.81■■□□□ 1.08
SF3A1-205ENST00000463818 TMEM87BQ96K49 555 aa21.81■■□□□ 1.08
SF3A1-205ENST00000463818 LZTS2Q9BRK4 669 aa21.81■■□□□ 1.08
SF3A1-205ENST00000463818 ANO2Q9NQ90 1003 aa21.81■■□□□ 1.08
SF3A1-205ENST00000463818 SLC4A7Q9Y6M7 1214 aa21.81■■□□□ 1.08
SF3A1-205ENST00000463818 CCDC69A6NI79 296 aa21.8■■□□□ 1.08
SF3A1-205ENST00000463818 SORBS3O60504 671 aa21.8■■□□□ 1.08
SF3A1-205ENST00000463818 IQCF3P0C7M6 154 aa21.8■■□□□ 1.08
SF3A1-205ENST00000463818 SMARCA1P28370 1054 aa21.8■■□□□ 1.08
SF3A1-205ENST00000463818 SP2Q02086 613 aa21.8■■□□□ 1.08
SF3A1-205ENST00000463818 BFSP2Q13515 415 aa21.8■■□□□ 1.08
SF3A1-205ENST00000463818 BMP2KLQ5H9B9 411 aa21.8■■□□□ 1.08
SF3A1-205ENST00000463818 CELF3Q5SZQ8 465 aaKnown RBP21.8■■□□□ 1.08
SF3A1-205ENST00000463818 MYSM1Q5VVJ2 828 aa21.8■■□□□ 1.08
SF3A1-205ENST00000463818 GDF6Q6KF10 455 aaPredicted RBP21.8■■□□□ 1.08
SF3A1-205ENST00000463818 SESTD1Q86VW0 696 aa21.8■■□□□ 1.08
SF3A1-205ENST00000463818 PPTC7Q8NI37 304 aa21.8■■□□□ 1.08
SF3A1-205ENST00000463818 RRP36Q96EU6 259 aaKnown RBP21.8■■□□□ 1.08
SF3A1-205ENST00000463818 SPZ1Q9BXG8 430 aa21.8■■□□□ 1.08
SF3A1-205ENST00000463818 ZBBXA8MT70 800 aa21.79■■□□□ 1.08
SF3A1-205ENST00000463818 PITPNM1O00562 1244 aa21.79■■□□□ 1.08
SF3A1-205ENST00000463818 PFKMP08237 780 aa21.79■■□□□ 1.08
SF3A1-205ENST00000463818 TGFB3P10600 412 aa21.79■■□□□ 1.08
SF3A1-205ENST00000463818 PSEN2P49810 448 aa21.79■■□□□ 1.08
SF3A1-205ENST00000463818 GNAQP50148 359 aa21.79■■□□□ 1.08
SF3A1-205ENST00000463818 RAB30Q15771 203 aa21.79■■□□□ 1.08
SF3A1-205ENST00000463818 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.79■■□□□ 1.08
SF3A1-205ENST00000463818 SRBD1Q8N5C6 995 aaKnown RBP21.79■■□□□ 1.08
SF3A1-205ENST00000463818 ALG1Q9BT22 464 aa21.79■■□□□ 1.08
SF3A1-205ENST00000463818 BAZ2BQ9UIF8 2168 aaKnown RBP21.79■■□□□ 1.08
SF3A1-205ENST00000463818 SCN10AQ9Y5Y9 1956 aa21.79■■□□□ 1.08
SF3A1-205ENST00000463818 PPFIA4O75335 1185 aa21.78■■□□□ 1.08
SF3A1-205ENST00000463818 PLEKHA8P1O95397 391 aa21.78■■□□□ 1.08
SF3A1-205ENST00000463818 GGPS1O95749 300 aa21.78■■□□□ 1.08
SF3A1-205ENST00000463818 RFC2P35250 354 aa21.78■■□□□ 1.08
SF3A1-205ENST00000463818 LIFRP42702 1097 aa21.78■■□□□ 1.08
SF3A1-205ENST00000463818 GPKOWQ92917 476 aaPredicted RBP eCLIP21.78■■□□□ 1.08
SF3A1-205ENST00000463818 SPATA33Q96N06 139 aa21.78■■□□□ 1.08
SF3A1-205ENST00000463818 CTAGE1Q96RT6 745 aa21.78■■□□□ 1.08
SF3A1-205ENST00000463818 LRRC2Q9BYS8 371 aa21.78■■□□□ 1.08
SF3A1-205ENST00000463818 NKX2-4Q9H2Z4 354 aa21.78■■□□□ 1.08
SF3A1-205ENST00000463818 HDAC6Q9UBN7 1215 aa21.78■■□□□ 1.08
SF3A1-205ENST00000463818 RXRAP19793 462 aa21.77■■□□□ 1.08
SF3A1-205ENST00000463818 RABGGTBP53611 331 aa21.77■■□□□ 1.08
SF3A1-205ENST00000463818 MFSD10Q14728 455 aa21.77■■□□□ 1.08
SF3A1-205ENST00000463818 HSDL1Q3SXM5 330 aa21.77■■□□□ 1.08
SF3A1-205ENST00000463818 CMTR1Q8N1G2 835 aaKnown RBP21.77■■□□□ 1.08
SF3A1-205ENST00000463818 C7orf31Q8N865 590 aa21.77■■□□□ 1.08
SF3A1-205ENST00000463818 KATNAL1Q9BW62 490 aa21.77■■□□□ 1.08
SF3A1-205ENST00000463818 FTOQ9C0B1 505 aaKnown RBP eCLIP21.77■■□□□ 1.08
SF3A1-205ENST00000463818 MLXIPQ9HAP2 919 aa21.77■■□□□ 1.08
SF3A1-205ENST00000463818 SEC63Q9UGP8 760 aaKnown RBP21.77■■□□□ 1.08
SF3A1-205ENST00000463818 GTF2IRD1Q9UHL9 959 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms