RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 C7orf31Q8N865 590 aa10.28□□□□□ -0.76
DDX39B-216ENST00000462421 CCDC148Q8NFR7 591 aa10.28□□□□□ -0.76
DDX39B-216ENST00000462421 BICD2Q8TD16 824 aa10.28□□□□□ -0.76
DDX39B-216ENST00000462421 TNPO1Q92973 898 aaKnown RBP10.28□□□□□ -0.76
DDX39B-216ENST00000462421 BRF1Q92994 677 aa10.28□□□□□ -0.76
DDX39B-216ENST00000462421 MTMR8Q96EF0 704 aa10.28□□□□□ -0.76
DDX39B-216ENST00000462421 UPF2Q9HAU5 1272 aaKnown RBP10.28□□□□□ -0.76
DDX39B-216ENST00000462421 PDLIM7Q9NR12 457 aa10.28□□□□□ -0.76
DDX39B-216ENST00000462421 ZNF215Q9UL58 517 aaPredicted RBP10.28□□□□□ -0.76
DDX39B-216ENST00000462421 GNEQ9Y223 722 aaKnown RBP10.28□□□□□ -0.76
DDX39B-216ENST00000462421 CDKL5O76039 1030 aa10.27□□□□□ -0.77
DDX39B-216ENST00000462421 PLEKHA8P1O95397 391 aa10.27□□□□□ -0.77
DDX39B-216ENST00000462421 FOSP01100 380 aaPredicted RBP10.27□□□□□ -0.77
DDX39B-216ENST00000462421 TGFB3P10600 412 aa10.27□□□□□ -0.77
DDX39B-216ENST00000462421 ACTN1P12814 892 aa10.27□□□□□ -0.77
DDX39B-216ENST00000462421 BFSP2Q13515 415 aa10.27□□□□□ -0.77
DDX39B-216ENST00000462421 PGM5Q15124 567 aa10.27□□□□□ -0.77
DDX39B-216ENST00000462421 ANKRD1Q15327 319 aa10.27□□□□□ -0.77
DDX39B-216ENST00000462421 RPUSD2Q8IZ73 545 aaKnown RBP10.27□□□□□ -0.77
DDX39B-216ENST00000462421 BADQ92934 168 aa10.27□□□□□ -0.77
DDX39B-216ENST00000462421 TCEANC2Q96MN5 208 aa10.27□□□□□ -0.77
DDX39B-216ENST00000462421 SPATA33Q96N06 139 aa10.27□□□□□ -0.77
DDX39B-216ENST00000462421 PDCD2LQ9BRP1 358 aa10.27□□□□□ -0.77
DDX39B-216ENST00000462421 HIPK3Q9H422 1215 aa10.27□□□□□ -0.77
DDX39B-216ENST00000462421 SENP2Q9HC62 589 aa10.27□□□□□ -0.77
DDX39B-216ENST00000462421 TAF6LQ9Y6J9 622 aa10.27□□□□□ -0.77
DDX39B-216ENST00000462421 PLXNA1Q9UIW2 1896 aa10.27□□□□□ -0.77
DDX39B-216ENST00000462421 RBM47A0AV96 593 aaKnown RBP10.26□□□□□ -0.77
DDX39B-216ENST00000462421 MYADML2A6NDP7 307 aa10.26□□□□□ -0.77
DDX39B-216ENST00000462421 FIBPO43427 364 aa10.26□□□□□ -0.77
DDX39B-216ENST00000462421 TIMP1P01033 207 aa10.26□□□□□ -0.77
DDX39B-216ENST00000462421 GNAT1P11488 350 aa10.26□□□□□ -0.77
DDX39B-216ENST00000462421 RPS6KB1P23443 525 aa10.26□□□□□ -0.77
DDX39B-216ENST00000462421 GNA11P29992 359 aa10.26□□□□□ -0.77
DDX39B-216ENST00000462421 PTPN11Q06124 597 aaPredicted RBP10.26□□□□□ -0.77
DDX39B-216ENST00000462421 LY6KQ17RY6 165 aa10.26□□□□□ -0.77
DDX39B-216ENST00000462421 PSRC1Q6PGN9 363 aaPredicted RBP10.26□□□□□ -0.77
DDX39B-216ENST00000462421 RUFY3Q7L099 469 aa10.26□□□□□ -0.77
DDX39B-216ENST00000462421 CMTR1Q8N1G2 835 aaKnown RBP10.26□□□□□ -0.77
DDX39B-216ENST00000462421 SRBD1Q8N5C6 995 aaKnown RBP10.26□□□□□ -0.77
DDX39B-216ENST00000462421 RNPC3Q96LT9 517 aaKnown RBP10.26□□□□□ -0.77
DDX39B-216ENST00000462421 GDF15Q99988 308 aa10.26□□□□□ -0.77
DDX39B-216ENST00000462421 PPP1R12CQ9BZL4 782 aa10.26□□□□□ -0.77
DDX39B-216ENST00000462421 KATNBL1Q9H079 304 aa10.26□□□□□ -0.77
DDX39B-216ENST00000462421 C6orf50Q9HD87 102 aa10.26□□□□□ -0.77
DDX39B-216ENST00000462421 SNX14Q9Y5W7 946 aa10.26□□□□□ -0.77
DDX39B-216ENST00000462421 PIK3CDO00329 1044 aa10.25□□□□□ -0.77
DDX39B-216ENST00000462421 KIAA0355O15063 1070 aa10.25□□□□□ -0.77
DDX39B-216ENST00000462421 GGPS1O95749 300 aa10.25□□□□□ -0.77
DDX39B-216ENST00000462421 MMP3P08254 477 aa10.25□□□□□ -0.77
DDX39B-216ENST00000462421 APOBRQ0VD83 1088 aa10.25□□□□□ -0.77
DDX39B-216ENST00000462421 AP3B2Q13367 1082 aa10.25□□□□□ -0.77
DDX39B-216ENST00000462421 PCNX4Q63HM2 1172 aa10.25□□□□□ -0.77
DDX39B-216ENST00000462421 NFRKBQ6P4R8 1299 aa10.25□□□□□ -0.77
DDX39B-216ENST00000462421 PPTC7Q8NI37 304 aa10.25□□□□□ -0.77
DDX39B-216ENST00000462421 AFG1LQ8WV93 481 aa10.25□□□□□ -0.77
DDX39B-216ENST00000462421 TBC1D5Q92609 795 aa10.25□□□□□ -0.77
DDX39B-216ENST00000462421 SDF4Q9BRK5 362 aa10.25□□□□□ -0.77
DDX39B-216ENST00000462421 PDRG1Q9NUG6 133 aa10.25□□□□□ -0.77
DDX39B-216ENST00000462421 V9GY48 417 aaPredicted RBP10.25□□□□□ -0.77
DDX39B-216ENST00000462421 SMCO2A6NFE2 343 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 A6NJR5 290 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 CYTH3O43739 400 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 PPP1R11O60927 126 aaPredicted RBP10.24□□□□□ -0.77
DDX39B-216ENST00000462421 PFKMP08237 780 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 PSMC6P62333 389 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 NKX3-2P78367 333 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 PURAQ00577 322 aaKnown RBP10.24□□□□□ -0.77
DDX39B-216ENST00000462421 EXOSC10Q01780 885 aaKnown RBP10.24□□□□□ -0.77
DDX39B-216ENST00000462421 GHRHRQ02643 423 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 SSRP1Q08945 709 aaKnown RBP10.24□□□□□ -0.77
DDX39B-216ENST00000462421 FAAP100Q0VG06 881 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 MTMR1Q13613 665 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 ADCK5Q3MIX3 580 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 ZNF697Q5TEC3 545 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 MFSD5Q6N075 450 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 USP17L6PQ6QN14 398 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 VSIG10LQ86VR7 867 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 RASEFQ8IZ41 740 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 GPKOWQ92917 476 aaPredicted RBP eCLIP10.24□□□□□ -0.77
DDX39B-216ENST00000462421 ALG1Q9BT22 464 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 SLC26A6Q9BXS9 759 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 C22orf23Q9BZE7 217 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 FTOQ9C0B1 505 aaKnown RBP eCLIP10.24□□□□□ -0.77
DDX39B-216ENST00000462421 AZI2Q9H6S1 392 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 BRMS1Q9HCU9 246 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 RTEL1Q9NZ71 1219 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 COL20A1Q9P218 1284 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 DDX49Q9Y6V7 483 aaKnown RBP10.24□□□□□ -0.77
DDX39B-216ENST00000462421 ASTN1O14525 1302 aa10.24□□□□□ -0.77
DDX39B-216ENST00000462421 hCG_1642624A0A1W2PR95 340 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 ZBBXA8MT70 800 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 TNRC18O15417 2968 aaPredicted RBP10.23□□□□□ -0.77
DDX39B-216ENST00000462421 MAFGO15525 162 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 ADCY6O43306 1168 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 SORBS3O60504 671 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 PPFIA4O75335 1185 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 SCG2P13521 617 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 RFC2P35250 354 aa10.23□□□□□ -0.77
DDX39B-216ENST00000462421 ANAPC15P60006 121 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms