RNA–Protein interactions for RNA: ENST00000461762.5

C9orf78-204, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-204ENST00000461762 TRIM66O15016 1216 aa16.75■□□□□ 0.27
C9orf78-204ENST00000461762 SLC37A4O43826 429 aa16.75■□□□□ 0.27
C9orf78-204ENST00000461762 NFIXQ14938 502 aa16.75■□□□□ 0.27
C9orf78-204ENST00000461762 RRAGAQ7L523 313 aa16.75■□□□□ 0.27
C9orf78-204ENST00000461762 GOLGA6L1Q8N7Z2 621 aa16.75■□□□□ 0.27
C9orf78-204ENST00000461762 HDAC7Q8WUI4 952 aa16.75■□□□□ 0.27
C9orf78-204ENST00000461762 CRACR2AQ9BSW2 395 aa16.75■□□□□ 0.27
C9orf78-204ENST00000461762 LRRC1Q9BTT6 524 aa16.75■□□□□ 0.27
C9orf78-204ENST00000461762 DMGDHQ9UI17 866 aaKnown RBP16.75■□□□□ 0.27
C9orf78-204ENST00000461762 COL24A1Q17RW2 1714 aa16.75■□□□□ 0.27
C9orf78-204ENST00000461762 TCP1P17987 556 aaKnown RBP16.74■□□□□ 0.27
C9orf78-204ENST00000461762 PSMD2Q13200 908 aa16.74■□□□□ 0.27
C9orf78-204ENST00000461762 MAPK8IP2Q13387 824 aaPredicted RBP16.74■□□□□ 0.27
C9orf78-204ENST00000461762 EZH2Q15910 746 aaKnown RBP16.74■□□□□ 0.27
C9orf78-204ENST00000461762 CCDC70Q6NSX1 233 aa16.74■□□□□ 0.27
C9orf78-204ENST00000461762 PTF1AQ7RTS3 328 aa16.74■□□□□ 0.27
C9orf78-204ENST00000461762 DYMQ7RTS9 669 aa16.74■□□□□ 0.27
C9orf78-204ENST00000461762 NUDT12Q9BQG2 462 aa16.74■□□□□ 0.27
C9orf78-204ENST00000461762 SALL4Q9UJQ4 1053 aa16.74■□□□□ 0.27
C9orf78-204ENST00000461762 LTBP4Q8N2S1 1624 aa16.74■□□□□ 0.27
C9orf78-204ENST00000461762 MAGEA1P43355 309 aa16.74■□□□□ 0.27
C9orf78-204ENST00000461762 TMEM119Q4V9L6 283 aa16.74■□□□□ 0.27
C9orf78-204ENST00000461762 PDXDC1Q6P996 788 aa16.74■□□□□ 0.27
C9orf78-204ENST00000461762 ARHGAP27Q6ZUM4 889 aa16.74■□□□□ 0.27
C9orf78-204ENST00000461762 TEX11Q8IYF3 940 aa16.74■□□□□ 0.27
C9orf78-204ENST00000461762 RIC8AQ9NPQ8 531 aa16.74■□□□□ 0.27
C9orf78-204ENST00000461762 HYOU1Q9Y4L1 999 aa16.74■□□□□ 0.27
C9orf78-204ENST00000461762 AKR1B10O60218 316 aa16.73■□□□□ 0.27
C9orf78-204ENST00000461762 RHBDL3P58872 404 aa16.73■□□□□ 0.27
C9orf78-204ENST00000461762 TMEM266Q2M3C6 531 aa16.73■□□□□ 0.27
C9orf78-204ENST00000461762 HGSNATQ68CP4 663 aa16.73■□□□□ 0.27
C9orf78-204ENST00000461762 DDX12PQ92771 950 aa16.73■□□□□ 0.27
C9orf78-204ENST00000461762 FAM163AQ96GL9 167 aaPredicted RBP16.73■□□□□ 0.27
C9orf78-204ENST00000461762 RASSF4Q9H2L5 321 aa16.73■□□□□ 0.27
C9orf78-204ENST00000461762 DEF6Q9H4E7 631 aa16.73■□□□□ 0.27
C9orf78-204ENST00000461762 SSU72P8A0A1W2PR75 194 aa16.73■□□□□ 0.27
C9orf78-204ENST00000461762 GNPATO15228 680 aa16.73■□□□□ 0.27
C9orf78-204ENST00000461762 SHOX2O60902 331 aaPredicted RBP16.73■□□□□ 0.27
C9orf78-204ENST00000461762 TDP2O95551 362 aa16.73■□□□□ 0.27
C9orf78-204ENST00000461762 PDHBP11177 359 aa16.73■□□□□ 0.27
C9orf78-204ENST00000461762 KCNMA1Q12791 1236 aa16.73■□□□□ 0.27
C9orf78-204ENST00000461762 NFRKBQ6P4R8 1299 aa16.73■□□□□ 0.27
C9orf78-204ENST00000461762 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.73■□□□□ 0.27
C9orf78-204ENST00000461762 KCNK18Q7Z418 384 aa16.73■□□□□ 0.27
C9orf78-204ENST00000461762 AMIGO3Q86WK7 504 aa16.73■□□□□ 0.27
C9orf78-204ENST00000461762 ARHGEF1Q92888 912 aaKnown RBP16.73■□□□□ 0.27
C9orf78-204ENST00000461762 GPR101Q96P66 508 aaPredicted RBP16.73■□□□□ 0.27
C9orf78-204ENST00000461762 ALS2CR12Q96Q35 445 aa16.73■□□□□ 0.27
C9orf78-204ENST00000461762 LRRC27Q9C0I9 530 aa16.73■□□□□ 0.27
C9orf78-204ENST00000461762 RBAK-RBAKDNI3L0D1 243 aa16.72■□□□□ 0.27
C9orf78-204ENST00000461762 PPFIA4O75335 1185 aa16.72■□□□□ 0.27
C9orf78-204ENST00000461762 ZCWPW2Q504Y3 356 aa16.72■□□□□ 0.27
C9orf78-204ENST00000461762 C10orf67Q8IYJ2 551 aa16.72■□□□□ 0.27
C9orf78-204ENST00000461762 PROM2Q8N271 834 aa16.72■□□□□ 0.27
C9orf78-204ENST00000461762 GLIS3Q8NEA6 775 aa16.72■□□□□ 0.27
C9orf78-204ENST00000461762 COA7Q96BR5 231 aa16.72■□□□□ 0.27
C9orf78-204ENST00000461762 CDK5RAP3Q96JB5 506 aa16.72■□□□□ 0.27
C9orf78-204ENST00000461762 DRC1Q96MC2 740 aa16.72■□□□□ 0.27
C9orf78-204ENST00000461762 TLR10Q9BXR5 811 aa16.72■□□□□ 0.27
C9orf78-204ENST00000461762 RAB34Q9BZG1 259 aa16.72■□□□□ 0.27
C9orf78-204ENST00000461762 CD209Q9NNX6 404 aa16.72■□□□□ 0.27
C9orf78-204ENST00000461762 MYH1P12882 1939 aa16.72■□□□□ 0.27
C9orf78-204ENST00000461762 A0A0U1RQG5 324 aaPredicted RBP16.72■□□□□ 0.27
C9orf78-204ENST00000461762 GOLGA6BA6NDN3 693 aa16.72■□□□□ 0.27
C9orf78-204ENST00000461762 POTEMA6NI47 508 aa16.72■□□□□ 0.27
C9orf78-204ENST00000461762 PLCG2P16885 1265 aa16.72■□□□□ 0.27
C9orf78-204ENST00000461762 ADCY7P51828 1080 aa16.72■□□□□ 0.27
C9orf78-204ENST00000461762 RNF10Q8N5U6 811 aaKnown RBP16.72■□□□□ 0.27
C9orf78-204ENST00000461762 DNAJC19Q96DA6 116 aa16.72■□□□□ 0.27
C9orf78-204ENST00000461762 NAV1Q8NEY1 1877 aa16.71■□□□□ 0.27
C9orf78-204ENST00000461762 LRRC41Q15345 812 aa16.71■□□□□ 0.27
C9orf78-204ENST00000461762 ECM1Q16610 540 aa16.71■□□□□ 0.27
C9orf78-204ENST00000461762 KLHDC7AQ5VTJ3 777 aa16.71■□□□□ 0.27
C9orf78-204ENST00000461762 KRT79Q5XKE5 535 aa16.71■□□□□ 0.27
C9orf78-204ENST00000461762 SND1Q7KZF4 910 aaKnown RBP eCLIP16.71■□□□□ 0.27
C9orf78-204ENST00000461762 SNX29Q8TEQ0 813 aa16.71■□□□□ 0.27
C9orf78-204ENST00000461762 MTMR8Q96EF0 704 aa16.71■□□□□ 0.27
C9orf78-204ENST00000461762 SH3GL2Q99962 352 aa16.71■□□□□ 0.27
C9orf78-204ENST00000461762 HINFPQ9BQA5 517 aa16.71■□□□□ 0.27
C9orf78-204ENST00000461762 SNHG28P0DPA3 235 aa16.71■□□□□ 0.26
C9orf78-204ENST00000461762 IL1R1P14778 569 aa16.71■□□□□ 0.26
C9orf78-204ENST00000461762 ATP2B2Q01814 1243 aa16.71■□□□□ 0.26
C9orf78-204ENST00000461762 GFPT1Q06210 699 aaPredicted RBP16.71■□□□□ 0.26
C9orf78-204ENST00000461762 HAUS3Q68CZ6 603 aa16.71■□□□□ 0.26
C9orf78-204ENST00000461762 PPP4R3AQ6IN85 833 aa16.71■□□□□ 0.26
C9orf78-204ENST00000461762 CCDC155Q8N6L0 562 aa16.71■□□□□ 0.26
C9orf78-204ENST00000461762 SYN2Q92777 582 aaPredicted RBP16.71■□□□□ 0.26
C9orf78-204ENST00000461762 TSG101Q99816 390 aa16.71■□□□□ 0.26
C9orf78-204ENST00000461762 RTCBQ9Y3I0 505 aaKnown RBP16.71■□□□□ 0.26
C9orf78-204ENST00000461762 DDX60LQ5H9U9 1706 aaKnown RBP16.71■□□□□ 0.26
C9orf78-204ENST00000461762 NOL4O94818 638 aa16.7■□□□□ 0.26
C9orf78-204ENST00000461762 TNFRSF8P28908 595 aa16.7■□□□□ 0.26
C9orf78-204ENST00000461762 CXCR5P32302 372 aa16.7■□□□□ 0.26
C9orf78-204ENST00000461762 GPSM2P81274 684 aa16.7■□□□□ 0.26
C9orf78-204ENST00000461762 RASSF7Q02833 373 aa16.7■□□□□ 0.26
C9orf78-204ENST00000461762 FRMPD2Q68DX3 1309 aaPredicted RBP16.7■□□□□ 0.26
C9orf78-204ENST00000461762 MYOCDQ8IZQ8 938 aa16.7■□□□□ 0.26
C9orf78-204ENST00000461762 FAM76AQ8TAV0 307 aa16.7■□□□□ 0.26
C9orf78-204ENST00000461762 MTMR4Q9NYA4 1195 aa16.7■□□□□ 0.26
C9orf78-204ENST00000461762 SMARCAL1Q9NZC9 954 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms