RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 MUM1L1Q5H9M0 696 aa11.64□□□□□ -0.55
HERC4-207ENST00000460168 C4orf32Q8N8J7 132 aa11.64□□□□□ -0.55
HERC4-207ENST00000460168 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.64□□□□□ -0.55
HERC4-207ENST00000460168 KCNV2Q8TDN2 545 aa11.64□□□□□ -0.55
HERC4-207ENST00000460168 ZC3H15Q8WU90 426 aaKnown RBP11.64□□□□□ -0.55
HERC4-207ENST00000460168 TMEM60Q9H2L4 133 aa11.64□□□□□ -0.55
HERC4-207ENST00000460168 DEF6Q9H4E7 631 aa11.64□□□□□ -0.55
HERC4-207ENST00000460168 EMILIN3Q9NT22 766 aa11.64□□□□□ -0.55
HERC4-207ENST00000460168 SPDYE3A6NKU9 549 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 MEIS2O14770 477 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 USP2O75604 605 aaPredicted RBP11.63□□□□□ -0.55
HERC4-207ENST00000460168 OR52Z1P0C646 297 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 NF2P35240 595 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 LONP1P36776 959 aaKnown RBP11.63□□□□□ -0.55
HERC4-207ENST00000460168 MAGEA8P43361 318 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 HMGCS2P54868 508 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 AP3B2Q13367 1082 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 ANO3Q9BYT9 981 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 RPAP3Q9H6T3 665 aaPredicted RBP11.63□□□□□ -0.55
HERC4-207ENST00000460168 KIAA1468Q9P260 1216 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 HOOK1Q9UJC3 728 aaKnown RBP11.63□□□□□ -0.55
HERC4-207ENST00000460168 CAND2O75155 1236 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 TXLNAP40222 546 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 PRPHP41219 470 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 HNRNPH2P55795 449 aaKnown RBP11.63□□□□□ -0.55
HERC4-207ENST00000460168 IRX1P78414 480 aaPredicted RBP11.63□□□□□ -0.55
HERC4-207ENST00000460168 VGLL4Q14135 290 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 IL17AQ16552 155 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 ANO6Q4KMQ2 910 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 NOL9Q5SY16 702 aaKnown RBP11.63□□□□□ -0.55
HERC4-207ENST00000460168 CCDC181Q5TID7 509 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 MCTP2Q6DN12 878 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 POTEDQ86YR6 584 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 GOLGA6L1Q8N7Z2 621 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 CCDC34Q96HJ3 373 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 FRMD4BQ9Y2L6 1034 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 CSADQ9Y600 493 aa11.63□□□□□ -0.55
HERC4-207ENST00000460168 C19orf81C9J6K1 198 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 TDP2O95551 362 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 CFBP00751 764 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 HOXA13P31271 388 aaPredicted RBP11.62□□□□□ -0.55
HERC4-207ENST00000460168 MAP3K9P80192 1104 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 STX1AQ16623 288 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 LDHDQ86WU2 507 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 SUGP1Q8IWZ8 645 aaKnown RBP11.62□□□□□ -0.55
HERC4-207ENST00000460168 TATDN2Q93075 761 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 DHX58Q96C10 678 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 TAF1DQ9H5J8 278 aaPredicted RBP11.62□□□□□ -0.55
HERC4-207ENST00000460168 ETAA1Q9NY74 926 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 CCPG1Q9ULG6 757 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 MRPL11Q9Y3B7 192 aaKnown RBP11.62□□□□□ -0.55
HERC4-207ENST00000460168 CTDP1Q9Y5B0 961 aaPredicted RBP11.62□□□□□ -0.55
HERC4-207ENST00000460168 SCN4AP35499 1836 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 MYH7BA7E2Y1 1941 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 OPLAHO14841 1288 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 FOSP01100 380 aaPredicted RBP11.62□□□□□ -0.55
HERC4-207ENST00000460168 ICAM1P05362 532 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 PAX3P23760 479 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 IREB2P48200 963 aaKnown RBP11.62□□□□□ -0.55
HERC4-207ENST00000460168 TTLL12Q14166 644 aaPredicted RBP11.62□□□□□ -0.55
HERC4-207ENST00000460168 CALCRLQ16602 461 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 PPP4R3AQ6IN85 833 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.62□□□□□ -0.55
HERC4-207ENST00000460168 RASSF8Q8NHQ8 419 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 SNRNP27Q8WVK2 155 aaKnown RBP11.62□□□□□ -0.55
HERC4-207ENST00000460168 ARPC5LQ9BPX5 153 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 DNAJC25Q9H1X3 360 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 TMOD4Q9NZQ9 345 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 SERTAD1Q9UHV2 236 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 ZNF232Q9UNY5 417 aa11.62□□□□□ -0.55
HERC4-207ENST00000460168 SMCHD1A6NHR9 2005 aa11.61□□□□□ -0.55
HERC4-207ENST00000460168 CCP110O43303 1012 aa11.61□□□□□ -0.55
HERC4-207ENST00000460168 TPD52L2O43399 206 aaKnown RBP11.61□□□□□ -0.55
HERC4-207ENST00000460168 SLC37A4O43826 429 aa11.61□□□□□ -0.55
HERC4-207ENST00000460168 ZRANB2O95218 330 aaKnown RBP eCLIP11.61□□□□□ -0.55
HERC4-207ENST00000460168 GCFC2P16383 781 aaKnown RBP11.61□□□□□ -0.55
HERC4-207ENST00000460168 NAT1P18440 290 aa11.61□□□□□ -0.55
HERC4-207ENST00000460168 CDC25AP30304 524 aa11.61□□□□□ -0.55
HERC4-207ENST00000460168 PNOCQ13519 176 aa11.61□□□□□ -0.55
HERC4-207ENST00000460168 KANK3Q6NY19 840 aa11.61□□□□□ -0.55
HERC4-207ENST00000460168 PNMA8AQ86V59 439 aaPredicted RBP11.61□□□□□ -0.55
HERC4-207ENST00000460168 CEP57L1Q8IYX8 460 aa11.61□□□□□ -0.55
HERC4-207ENST00000460168 CPXCR1Q8N123 301 aa11.61□□□□□ -0.55
HERC4-207ENST00000460168 FAM200AQ8TCP9 573 aa11.61□□□□□ -0.55
HERC4-207ENST00000460168 CDCA5Q96FF9 252 aa11.61□□□□□ -0.55
HERC4-207ENST00000460168 DRC1Q96MC2 740 aa11.61□□□□□ -0.55
HERC4-207ENST00000460168 NAP1L4Q99733 375 aaKnown RBP11.61□□□□□ -0.55
HERC4-207ENST00000460168 ANO10Q9NW15 660 aa11.61□□□□□ -0.55
HERC4-207ENST00000460168 DDX25Q9UHL0 483 aaKnown RBP11.61□□□□□ -0.55
HERC4-207ENST00000460168 PPP1R9AQ9ULJ8 1098 aa11.61□□□□□ -0.55
HERC4-207ENST00000460168 ABCB11O95342 1321 aa11.61□□□□□ -0.55
HERC4-207ENST00000460168 PHIPQ8WWQ0 1821 aa11.61□□□□□ -0.55
HERC4-207ENST00000460168 A0A087X0B3 334 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 PIK3CDO00329 1044 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 MARCH6O60337 910 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 PPFIA2O75334 1257 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 EIF3JO75822 258 aaKnown RBP11.6□□□□□ -0.55
HERC4-207ENST00000460168 SETSIPP0DME0 302 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 UBA7P41226 1012 aa11.6□□□□□ -0.55
HERC4-207ENST00000460168 TECP42680 631 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms