RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 QRICH1Q2TAL8 776 aa7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 NFRKBQ6P4R8 1299 aa7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 TRIM50Q86XT4 487 aa7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 RETREG2Q8NC44 543 aa7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 SYTL5Q8TDW5 730 aaPredicted RBP7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 ANKS1AQ92625 1134 aa7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 GPKOWQ92917 476 aaPredicted RBP eCLIP7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 TAAR1Q96RJ0 339 aa7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 C17orf80Q9BSJ5 609 aa7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 TSPYL2Q9H2G4 693 aaPredicted RBP7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 HDAC6Q9UBN7 1215 aa7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 Q9Y3F1 56 aa7.03□□□□□ -1.28
HLA-DPA3-207ENST00000454398 LINC01553A4QN01 128 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 TRIM6-TRIM34B2RNG4 842 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 B4E1Z4 1266 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 OPLAHO14841 1288 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 PPP1R11O60927 126 aaPredicted RBP7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 SNHG28P0DPA3 235 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 CKBP12277 381 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 SELPP16109 830 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 KCNA5P22460 613 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 HOXA13P31271 388 aaPredicted RBP7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 RRP1P56182 461 aaKnown RBP7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 BFSP2Q13515 415 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 TRIM71Q2Q1W2 868 aaKnown RBP7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 B4GALNT3Q6L9W6 998 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 CCDC62Q6P9F0 684 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 ADGRF4Q8IZF3 695 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 ENAHQ8N8S7 591 aaPredicted RBP7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 PNMA1Q8ND90 353 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 RILPL2Q969X0 211 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 EVI5LQ96CN4 794 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 RMDN3Q96TC7 470 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 LRFN3Q9BTN0 628 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 ZBED2Q9BTP6 218 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 BCAS3Q9H6U6 928 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 VAT1LQ9HCJ6 419 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 SUPT16HQ9Y5B9 1047 aaKnown RBP7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 MRVI1Q9Y6F6 885 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 ZDBF2Q9HCK1 2354 aa7.02□□□□□ -1.29
HLA-DPA3-207ENST00000454398 ZMYM6O95789 1325 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 ZNF318Q5VUA4 2279 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 COL4A6Q14031 1691 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 H3BQ06 376 aaPredicted RBP7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 RGS20O76081 388 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 F2P00734 622 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 CFBP00751 764 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 GH1P01241 217 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 MYCLP12524 364 aaPredicted RBP7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 IL9P15248 144 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 POU3F3P20264 500 aaPredicted RBP7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 UBA1P22314 1058 aaKnown RBP7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 RFC2P35250 354 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 PSEN2P49810 448 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 SP4Q02446 784 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 COL9A3Q14050 684 aaPredicted RBP7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 MFSD10Q14728 455 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 ALX1Q15699 326 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 KIAA0753Q2KHM9 967 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 MCMDC2Q4G0Z9 681 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 BRDTQ58F21 947 aaPredicted RBP7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 PPP4R3BQ5MIZ7 849 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 ZNF618Q5T7W0 954 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 MFSD6Q6ZSS7 791 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 HOMER1Q86YM7 354 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 MYOCDQ8IZQ8 938 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 STAG2Q8N3U4 1231 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 C7orf31Q8N865 590 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 AFAP1L1Q8TED9 768 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 PIBF1Q8WXW3 757 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 HLA-CQ95604 372 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 UBE2ZQ9H832 354 aaPredicted RBP7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 SUGCTQ9HAC7 445 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 HELLSQ9NRZ9 838 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 GTF2IRD1Q9UHL9 959 aa7.01□□□□□ -1.29
HLA-DPA3-207ENST00000454398 KIAA1671Q9BY89 1806 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 KIF28PB7ZC32 967 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 NKRFO15226 690 aaKnown RBP eCLIP7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 LGR5O75473 907 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 BAIAP3O94812 1187 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 GJB5O95377 273 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 SSTR3P32745 418 aaPredicted RBP7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 THPOP40225 353 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 CLUL1Q15846 466 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 AAK1Q2M2I8 961 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 HSDL1Q3SXM5 330 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 TMEM31Q5JXX7 168 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 ARHGEF16Q5VV41 709 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 CNKSR3Q6P9H4 555 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 CWC27Q6UX04 472 aaKnown RBP7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 EP400NLQ6ZTU2 488 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 DHX37Q8IY37 1157 aaKnown RBP7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 CCDC155Q8N6L0 562 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 DNERQ8NFT8 737 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 CAGE1Q8TC20 777 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 ESR2Q92731 530 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 C1QTNF1Q9BXJ1 281 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 KAT14Q9H8E8 782 aa7□□□□□ -1.29
HLA-DPA3-207ENST00000454398 JMJD4Q9H9V9 463 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms