RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 UBAC1Q9BSL1 405 aa27.69■■■□□ 2.02
LYSMD2-202ENST00000454181 KRT23Q9C075 422 aa27.69■■■□□ 2.02
LYSMD2-202ENST00000454181 EIF3JO75822 258 aaKnown RBP27.68■■■□□ 2.02
LYSMD2-202ENST00000454181 GDF6Q6KF10 455 aaPredicted RBP27.68■■■□□ 2.02
LYSMD2-202ENST00000454181 SESTD1Q86VW0 696 aa27.68■■■□□ 2.02
LYSMD2-202ENST00000454181 C7orf31Q8N865 590 aa27.68■■■□□ 2.02
LYSMD2-202ENST00000454181 ENAHQ8N8S7 591 aaPredicted RBP27.68■■■□□ 2.02
LYSMD2-202ENST00000454181 ZBED2Q9BTP6 218 aa27.68■■■□□ 2.02
LYSMD2-202ENST00000454181 ZSWIM5Q9P217 1185 aa27.68■■■□□ 2.02
LYSMD2-202ENST00000454181 COL20A1Q9P218 1284 aa27.68■■■□□ 2.02
LYSMD2-202ENST00000454181 MTCH2Q9Y6C9 303 aa27.68■■■□□ 2.02
LYSMD2-202ENST00000454181 TLL1O43897 1013 aa27.67■■■□□ 2.02
LYSMD2-202ENST00000454181 PARNO95453 639 aaKnown RBP27.67■■■□□ 2.02
LYSMD2-202ENST00000454181 CFBP00751 764 aa27.67■■■□□ 2.02
LYSMD2-202ENST00000454181 SELPP16109 830 aa27.67■■■□□ 2.02
LYSMD2-202ENST00000454181 EIF2AK2P19525 551 aaKnown RBP27.67■■■□□ 2.02
LYSMD2-202ENST00000454181 POU3F3P20264 500 aaPredicted RBP27.67■■■□□ 2.02
LYSMD2-202ENST00000454181 COL9A1P20849 921 aa27.67■■■□□ 2.02
LYSMD2-202ENST00000454181 TAP1Q03518 808 aa27.67■■■□□ 2.02
LYSMD2-202ENST00000454181 PLEKHM2Q8IWE5 1019 aa27.67■■■□□ 2.02
LYSMD2-202ENST00000454181 KATNAL1Q9BW62 490 aa27.67■■■□□ 2.02
LYSMD2-202ENST00000454181 OSBPL3Q9H4L5 887 aa27.67■■■□□ 2.02
LYSMD2-202ENST00000454181 MRVI1Q9Y6F6 885 aa27.67■■■□□ 2.02
LYSMD2-202ENST00000454181 SCN5AQ14524 2016 aa27.67■■■□□ 2.02
LYSMD2-202ENST00000454181 LAMC2Q13753 1193 aa27.66■■■□□ 2.02
LYSMD2-202ENST00000454181 LRRC8DQ7L1W4 858 aa27.66■■■□□ 2.02
LYSMD2-202ENST00000454181 DSCC1Q9BVC3 393 aa27.66■■■□□ 2.02
LYSMD2-202ENST00000454181 AMNQ9BXJ7 453 aa27.66■■■□□ 2.02
LYSMD2-202ENST00000454181 CNNM2Q9H8M5 875 aa27.66■■■□□ 2.02
LYSMD2-202ENST00000454181 JMJD4Q9H9V9 463 aa27.66■■■□□ 2.02
LYSMD2-202ENST00000454181 DDX41Q9UJV9 622 aaKnown RBP27.66■■■□□ 2.02
LYSMD2-202ENST00000454181 NR3C2P08235 984 aa27.65■■■□□ 2.02
LYSMD2-202ENST00000454181 TFF2Q03403 129 aa27.65■■■□□ 2.02
LYSMD2-202ENST00000454181 KAT2BQ92831 832 aa27.65■■■□□ 2.02
LYSMD2-202ENST00000454181 ALG1Q9BT22 464 aa27.65■■■□□ 2.02
LYSMD2-202ENST00000454181 PSEN2P49810 448 aa27.64■■■□□ 2.02
LYSMD2-202ENST00000454181 IFIT1BQ5T764 474 aaKnown RBP27.64■■■□□ 2.02
LYSMD2-202ENST00000454181 DHX37Q8IY37 1157 aaKnown RBP27.64■■■□□ 2.02
LYSMD2-202ENST00000454181 PXMP2Q9NR77 195 aa27.64■■■□□ 2.02
LYSMD2-202ENST00000454181 GTF2IRD1Q9UHL9 959 aa27.64■■■□□ 2.02
LYSMD2-202ENST00000454181 CHD7Q9P2D1 2997 aa27.64■■■□□ 2.02
LYSMD2-202ENST00000454181 BMP1P13497 986 aa27.63■■■□□ 2.01
LYSMD2-202ENST00000454181 NUCB1Q02818 461 aa27.63■■■□□ 2.01
LYSMD2-202ENST00000454181 EMID1Q96A84 441 aaPredicted RBP27.63■■■□□ 2.01
LYSMD2-202ENST00000454181 HDAC6Q9UBN7 1215 aa27.63■■■□□ 2.01
LYSMD2-202ENST00000454181 COG5Q9UP83 839 aa27.63■■■□□ 2.01
LYSMD2-202ENST00000454181 MYCLP12524 364 aaPredicted RBP27.62■■■□□ 2.01
LYSMD2-202ENST00000454181 WDR5P61964 334 aaKnown RBP27.62■■■□□ 2.01
LYSMD2-202ENST00000454181 MFSD10Q14728 455 aa27.62■■■□□ 2.01
LYSMD2-202ENST00000454181 CNKSR3Q6P9H4 555 aa27.62■■■□□ 2.01
LYSMD2-202ENST00000454181 NCOR1O75376 2440 aa27.61■■■□□ 2.01
LYSMD2-202ENST00000454181 EPOPA6NHQ4 379 aa27.61■■■□□ 2.01
LYSMD2-202ENST00000454181 CKBP12277 381 aa27.61■■■□□ 2.01
LYSMD2-202ENST00000454181 KIAA0753Q2KHM9 967 aa27.61■■■□□ 2.01
LYSMD2-202ENST00000454181 KCNV1Q6PIU1 500 aa27.61■■■□□ 2.01
LYSMD2-202ENST00000454181 PPTC7Q8NI37 304 aa27.61■■■□□ 2.01
LYSMD2-202ENST00000454181 NECAB3Q96P71 396 aaPredicted RBP27.61■■■□□ 2.01
LYSMD2-202ENST00000454181 MAP3K20Q9NYL2 800 aaKnown RBP27.61■■■□□ 2.01
LYSMD2-202ENST00000454181 KLRF2D3W0D1 207 aa27.6■■■□□ 2.01
LYSMD2-202ENST00000454181 KCNQ1P51787 676 aa27.6■■■□□ 2.01
LYSMD2-202ENST00000454181 TRAF1Q13077 416 aa27.6■■■□□ 2.01
LYSMD2-202ENST00000454181 PTK7Q13308 1070 aa27.6■■■□□ 2.01
LYSMD2-202ENST00000454181 KRT40Q6A162 431 aa27.6■■■□□ 2.01
LYSMD2-202ENST00000454181 CTAGE1Q96RT6 745 aa27.6■■■□□ 2.01
LYSMD2-202ENST00000454181 PRRC2BQ5JSZ5 2229 aaKnown RBP27.6■■■□□ 2.01
LYSMD2-202ENST00000454181 TANC1Q9C0D5 1861 aa27.59■■■□□ 2.01
LYSMD2-202ENST00000454181 ABHD14A-ACY1A0A1B0GW23 586 aa27.59■■■□□ 2.01
LYSMD2-202ENST00000454181 EFCAB14O75071 495 aa27.59■■■□□ 2.01
LYSMD2-202ENST00000454181 ARHGEF15O94989 841 aa27.59■■■□□ 2.01
LYSMD2-202ENST00000454181 ZNF286BP0CG31 522 aa27.59■■■□□ 2.01
LYSMD2-202ENST00000454181 HSD17B4P51659 736 aa27.59■■■□□ 2.01
LYSMD2-202ENST00000454181 RBL2Q08999 1139 aa27.59■■■□□ 2.01
LYSMD2-202ENST00000454181 GRB10Q13322 594 aa27.59■■■□□ 2.01
LYSMD2-202ENST00000454181 IKBKEQ14164 716 aa27.59■■■□□ 2.01
LYSMD2-202ENST00000454181 STAG2Q8N3U4 1231 aa27.59■■■□□ 2.01
LYSMD2-202ENST00000454181 DHX38Q92620 1227 aaKnown RBP27.59■■■□□ 2.01
LYSMD2-202ENST00000454181 PCDHA1Q9Y5I3 950 aa27.59■■■□□ 2.01
LYSMD2-202ENST00000454181 PPFIA4O75335 1185 aa27.58■■■□□ 2.01
LYSMD2-202ENST00000454181 F2P00734 622 aa27.58■■■□□ 2.01
LYSMD2-202ENST00000454181 TRDNQ13061 729 aa27.58■■■□□ 2.01
LYSMD2-202ENST00000454181 HLA-CQ95604 372 aa27.58■■■□□ 2.01
LYSMD2-202ENST00000454181 PDCD2LQ9BRP1 358 aa27.58■■■□□ 2.01
LYSMD2-202ENST00000454181 MUC3AQ02505 3323 aa27.57■■■□□ 2
LYSMD2-202ENST00000454181 ZBTB5O15062 677 aa27.57■■■□□ 2
LYSMD2-202ENST00000454181 NBNO60934 754 aa27.57■■■□□ 2
LYSMD2-202ENST00000454181 IGHDP01880 384 aa27.57■■■□□ 2
LYSMD2-202ENST00000454181 CXCL10P02778 98 aa27.57■■■□□ 2
LYSMD2-202ENST00000454181 GPNMBQ14956 572 aa27.57■■■□□ 2
LYSMD2-202ENST00000454181 TMCO2Q7Z6W1 182 aaPredicted RBP27.57■■■□□ 2
LYSMD2-202ENST00000454181 SAMD3Q8N6K7 520 aa27.57■■■□□ 2
LYSMD2-202ENST00000454181 SPATA33Q96N06 139 aa27.57■■■□□ 2
LYSMD2-202ENST00000454181 RAD9AQ99638 391 aa27.57■■■□□ 2
LYSMD2-202ENST00000454181 TRIP12Q14669 1992 aaPredicted RBP27.57■■■□□ 2
LYSMD2-202ENST00000454181 BDP1A6H8Y1 2624 aa27.56■■■□□ 2
LYSMD2-202ENST00000454181 SORBS3O60504 671 aa27.56■■■□□ 2
LYSMD2-202ENST00000454181 DEFB103AP81534 67 aa27.56■■■□□ 2
LYSMD2-202ENST00000454181 STOX1Q6ZVD7 989 aa27.56■■■□□ 2
LYSMD2-202ENST00000454181 C1QTNF1Q9BXJ1 281 aa27.56■■■□□ 2
LYSMD2-202ENST00000454181 TET1Q8NFU7 2136 aa27.56■■■□□ 2
LYSMD2-202ENST00000454181 LAMA4Q16363 1823 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms