RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 GJD2Q9UKL4 321 aa10.04□□□□□ -0.8
COL28A1-205ENST00000453441 RIPK3Q9Y572 518 aa10.04□□□□□ -0.8
COL28A1-205ENST00000453441 DNAJC25-GNG10A0A024R161 153 aa10.03□□□□□ -0.8
COL28A1-205ENST00000453441 PEX10O60683 326 aa10.03□□□□□ -0.8
COL28A1-205ENST00000453441 CAPN2P17655 700 aa10.03□□□□□ -0.8
COL28A1-205ENST00000453441 XBP1P17861 261 aa10.03□□□□□ -0.8
COL28A1-205ENST00000453441 SNAP25P60880 206 aa10.03□□□□□ -0.8
COL28A1-205ENST00000453441 CCT2P78371 535 aaKnown RBP10.03□□□□□ -0.8
COL28A1-205ENST00000453441 PRKCZQ05513 592 aa10.03□□□□□ -0.8
COL28A1-205ENST00000453441 SSRP1Q08945 709 aaKnown RBP10.03□□□□□ -0.8
COL28A1-205ENST00000453441 SCRN1Q12765 414 aa10.03□□□□□ -0.8
COL28A1-205ENST00000453441 ME3Q16798 604 aa10.03□□□□□ -0.8
COL28A1-205ENST00000453441 PFKFB3Q16875 520 aaPredicted RBP10.03□□□□□ -0.8
COL28A1-205ENST00000453441 SLC35G1Q2M3R5 365 aa10.03□□□□□ -0.8
COL28A1-205ENST00000453441 USH1GQ495M9 461 aa10.03□□□□□ -0.8
COL28A1-205ENST00000453441 OLFML2BQ68BL8 750 aa10.03□□□□□ -0.8
COL28A1-205ENST00000453441 MCTP2Q6DN12 878 aa10.03□□□□□ -0.8
COL28A1-205ENST00000453441 RNF207Q6ZRF8 634 aa10.03□□□□□ -0.8
COL28A1-205ENST00000453441 DPP9Q86TI2 863 aa10.03□□□□□ -0.8
COL28A1-205ENST00000453441 CCDC148Q8NFR7 591 aa10.03□□□□□ -0.8
COL28A1-205ENST00000453441 CLEC4DQ8WXI8 215 aa10.03□□□□□ -0.8
COL28A1-205ENST00000453441 A1CFQ9NQ94 594 aaKnown RBP10.03□□□□□ -0.8
COL28A1-205ENST00000453441 SH3GLB2Q9NR46 395 aa10.03□□□□□ -0.8
COL28A1-205ENST00000453441 HOMER2Q9NSB8 354 aa10.03□□□□□ -0.8
COL28A1-205ENST00000453441 NRBP1Q9UHY1 535 aa10.03□□□□□ -0.8
COL28A1-205ENST00000453441 V9GY48 417 aaPredicted RBP10.03□□□□□ -0.8
COL28A1-205ENST00000453441 ESYT2A0FGR8 921 aa10.02□□□□□ -0.81
COL28A1-205ENST00000453441 PIK3CDO00329 1044 aa10.02□□□□□ -0.81
COL28A1-205ENST00000453441 PPP1R11O60927 126 aaPredicted RBP10.02□□□□□ -0.81
COL28A1-205ENST00000453441 HMGCRP04035 888 aa10.02□□□□□ -0.81
COL28A1-205ENST00000453441 SCG2P13521 617 aa10.02□□□□□ -0.81
COL28A1-205ENST00000453441 HMGN5P82970 282 aaKnown RBP10.02□□□□□ -0.81
COL28A1-205ENST00000453441 STK3Q13188 491 aa10.02□□□□□ -0.81
COL28A1-205ENST00000453441 ZNF792Q3KQV3 632 aa10.02□□□□□ -0.81
COL28A1-205ENST00000453441 MUM1L1Q5H9M0 696 aa10.02□□□□□ -0.81
COL28A1-205ENST00000453441 GALNT17Q6IS24 598 aa10.02□□□□□ -0.81
COL28A1-205ENST00000453441 HEATR3Q7Z4Q2 680 aa10.02□□□□□ -0.81
COL28A1-205ENST00000453441 CMTR1Q8N1G2 835 aaKnown RBP10.02□□□□□ -0.81
COL28A1-205ENST00000453441 CCDC82Q8N4S0 544 aa10.02□□□□□ -0.81
COL28A1-205ENST00000453441 DNERQ8NFT8 737 aa10.02□□□□□ -0.81
COL28A1-205ENST00000453441 CUL5Q93034 780 aa10.02□□□□□ -0.81
COL28A1-205ENST00000453441 SLC26A6Q9BXS9 759 aa10.02□□□□□ -0.81
COL28A1-205ENST00000453441 NCOA5Q9HCD5 579 aaKnown RBP10.02□□□□□ -0.81
COL28A1-205ENST00000453441 BARHL2Q9NY43 387 aa10.02□□□□□ -0.81
COL28A1-205ENST00000453441 CYP39A1Q9NYL5 469 aa10.02□□□□□ -0.81
COL28A1-205ENST00000453441 KIF3AQ9Y496 699 aa10.02□□□□□ -0.81
COL28A1-205ENST00000453441 ZSWIM8A7E2V4 1837 aa10.02□□□□□ -0.81
COL28A1-205ENST00000453441 PLXNA1Q9UIW2 1896 aa10.02□□□□□ -0.81
COL28A1-205ENST00000453441 SMCHD1A6NHR9 2005 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 PTPDC1A2A3K4 754 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 ASB14A6NK59 587 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 GCOM1H8Y6P7 765 aaPredicted RBP10.01□□□□□ -0.81
COL28A1-205ENST00000453441 NFIBO00712 420 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 ADCY3O60266 1144 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 POLR2MP0CAP2 368 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 GNA11P29992 359 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 GRK4P32298 578 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 HSD17B4P51659 736 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 NAPAP54920 295 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 RPS6P62753 249 aaKnown RBP10.01□□□□□ -0.81
COL28A1-205ENST00000453441 UBXN2AP68543 259 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 SLC9C1Q4G0N8 1177 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 MFSD14CQ5VZR4 134 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 MAMDC4Q6UXC1 1216 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 NSMFQ6X4W1 530 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 FAM133AQ8N9E0 248 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 BICD2Q8TD16 824 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 SNX21Q969T3 373 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 MAML3Q96JK9 1138 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 C6orf50Q9HD87 102 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 GABRQQ9UN88 632 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 PTCH2Q9Y6C5 1203 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 SYNGAP1Q96PV0 1343 aa10.01□□□□□ -0.81
COL28A1-205ENST00000453441 TRIM66O15016 1216 aa10□□□□□ -0.81
COL28A1-205ENST00000453441 COBLO75128 1261 aa10□□□□□ -0.81
COL28A1-205ENST00000453441 FOSP01100 380 aaPredicted RBP10□□□□□ -0.81
COL28A1-205ENST00000453441 CYP2B6P20813 491 aa10□□□□□ -0.81
COL28A1-205ENST00000453441 CALML3P27482 149 aa10□□□□□ -0.81
COL28A1-205ENST00000453441 ADCY7P51828 1080 aa10□□□□□ -0.81
COL28A1-205ENST00000453441 CAP1Q01518 475 aa10□□□□□ -0.81
COL28A1-205ENST00000453441 BAATQ14032 418 aaPredicted RBP10□□□□□ -0.81
COL28A1-205ENST00000453441 WWC2Q6AWC2 1192 aa10□□□□□ -0.81
COL28A1-205ENST00000453441 NOL8Q76FK4 1167 aaKnown RBP10□□□□□ -0.81
COL28A1-205ENST00000453441 SCUBE3Q8IX30 993 aa10□□□□□ -0.81
COL28A1-205ENST00000453441 SYTL5Q8TDW5 730 aaPredicted RBP10□□□□□ -0.81
COL28A1-205ENST00000453441 NSUN6Q8TEA1 469 aaKnown RBP10□□□□□ -0.81
COL28A1-205ENST00000453441 PIBF1Q8WXW3 757 aa10□□□□□ -0.81
COL28A1-205ENST00000453441 PHKBQ93100 1093 aa10□□□□□ -0.81
COL28A1-205ENST00000453441 ARMC5Q96C12 935 aa10□□□□□ -0.81
COL28A1-205ENST00000453441 IWS1Q96ST2 819 aa10□□□□□ -0.81
COL28A1-205ENST00000453441 TINF2Q9BSI4 451 aa10□□□□□ -0.81
COL28A1-205ENST00000453441 MCOLN1Q9GZU1 580 aa10□□□□□ -0.81
COL28A1-205ENST00000453441 PSTPIP2Q9H939 334 aa10□□□□□ -0.81
COL28A1-205ENST00000453441 EHMT1Q9H9B1 1298 aa10□□□□□ -0.81
COL28A1-205ENST00000453441 RIC8AQ9NPQ8 531 aa10□□□□□ -0.81
COL28A1-205ENST00000453441 ZSCAN21Q9Y5A6 473 aaPredicted RBP10□□□□□ -0.81
COL28A1-205ENST00000453441 STXBP3O00186 592 aa9.99□□□□□ -0.81
COL28A1-205ENST00000453441 OPLAHO14841 1288 aa9.99□□□□□ -0.81
COL28A1-205ENST00000453441 LARGE1O95461 756 aa9.99□□□□□ -0.81
COL28A1-205ENST00000453441 CFBP00751 764 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms