RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 DDAH1O94760 285 aa25■■□□□ 1.59
C9orf3-208ENST00000451893 CYP2C9P11712 490 aa25■■□□□ 1.59
C9orf3-208ENST00000451893 DNAJB2P25686 324 aa25■■□□□ 1.59
C9orf3-208ENST00000451893 ANP32AP39687 249 aaKnown RBP25■■□□□ 1.59
C9orf3-208ENST00000451893 RNF20Q5VTR2 975 aa25■■□□□ 1.59
C9orf3-208ENST00000451893 NFRKBQ6P4R8 1299 aa25■■□□□ 1.59
C9orf3-208ENST00000451893 ZNF654Q8IZM8 581 aa25■■□□□ 1.59
C9orf3-208ENST00000451893 TMTC2Q8N394 836 aa25■■□□□ 1.59
C9orf3-208ENST00000451893 CUL5Q93034 780 aa25■■□□□ 1.59
C9orf3-208ENST00000451893 MTMR8Q96EF0 704 aa25■■□□□ 1.59
C9orf3-208ENST00000451893 RRP36Q96EU6 259 aaKnown RBP25■■□□□ 1.59
C9orf3-208ENST00000451893 UMODL1Q5DID0 1318 aa25■■□□□ 1.59
C9orf3-208ENST00000451893 SCN10AQ9Y5Y9 1956 aa25■■□□□ 1.59
C9orf3-208ENST00000451893 ZBBXA8MT70 800 aa24.99■■□□□ 1.59
C9orf3-208ENST00000451893 EPB41L2O43491 1005 aaKnown RBP24.99■■□□□ 1.59
C9orf3-208ENST00000451893 PPP1R11O60927 126 aaPredicted RBP24.99■■□□□ 1.59
C9orf3-208ENST00000451893 MMP3P08254 477 aa24.99■■□□□ 1.59
C9orf3-208ENST00000451893 CCND2P30279 289 aa24.99■■□□□ 1.59
C9orf3-208ENST00000451893 ANTXR2P58335 489 aa24.99■■□□□ 1.59
C9orf3-208ENST00000451893 TROAPQ12815 778 aa24.99■■□□□ 1.59
C9orf3-208ENST00000451893 DGKDQ16760 1214 aa24.99■■□□□ 1.59
C9orf3-208ENST00000451893 DHX37Q8IY37 1157 aaKnown RBP24.99■■□□□ 1.59
C9orf3-208ENST00000451893 TMEM87BQ96K49 555 aa24.99■■□□□ 1.59
C9orf3-208ENST00000451893 CDX2Q99626 313 aaPredicted RBP24.99■■□□□ 1.59
C9orf3-208ENST00000451893 MYL10Q9BUA6 226 aa24.99■■□□□ 1.59
C9orf3-208ENST00000451893 REC8O95072 547 aa24.98■■□□□ 1.59
C9orf3-208ENST00000451893 GNAQP50148 359 aa24.98■■□□□ 1.59
C9orf3-208ENST00000451893 PTPN11Q06124 597 aaPredicted RBP24.98■■□□□ 1.59
C9orf3-208ENST00000451893 CCDC62Q6P9F0 684 aa24.98■■□□□ 1.59
C9orf3-208ENST00000451893 KCNV1Q6PIU1 500 aa24.98■■□□□ 1.59
C9orf3-208ENST00000451893 OTOP2Q7RTS6 562 aa24.98■■□□□ 1.59
C9orf3-208ENST00000451893 CCDC155Q8N6L0 562 aa24.98■■□□□ 1.59
C9orf3-208ENST00000451893 IGDCC4Q8TDY8 1250 aa24.98■■□□□ 1.59
C9orf3-208ENST00000451893 PPP1R13LQ8WUF5 828 aa24.98■■□□□ 1.59
C9orf3-208ENST00000451893 TIFAQ96CG3 184 aa24.98■■□□□ 1.59
C9orf3-208ENST00000451893 SCLYQ96I15 445 aa24.98■■□□□ 1.59
C9orf3-208ENST00000451893 PDCD2LQ9BRP1 358 aa24.98■■□□□ 1.59
C9orf3-208ENST00000451893 LSG1Q9H089 658 aaKnown RBP24.98■■□□□ 1.59
C9orf3-208ENST00000451893 MSRAQ9UJ68 235 aa24.98■■□□□ 1.59
C9orf3-208ENST00000451893 SLC27A2O14975 620 aa24.97■■□□□ 1.59
C9orf3-208ENST00000451893 FOSL2P15408 326 aa24.97■■□□□ 1.59
C9orf3-208ENST00000451893 LAMC2Q13753 1193 aa24.97■■□□□ 1.59
C9orf3-208ENST00000451893 PGM5Q15124 567 aa24.97■■□□□ 1.59
C9orf3-208ENST00000451893 CREB3L3Q68CJ9 461 aa24.97■■□□□ 1.59
C9orf3-208ENST00000451893 SYNE3Q6ZMZ3 975 aa24.97■■□□□ 1.59
C9orf3-208ENST00000451893 SMARCC2Q8TAQ2 1214 aa24.97■■□□□ 1.59
C9orf3-208ENST00000451893 MYLIPQ8WY64 445 aa24.97■■□□□ 1.59
C9orf3-208ENST00000451893 TBC1D32Q96NH3 1257 aa24.97■■□□□ 1.59
C9orf3-208ENST00000451893 LZTS2Q9BRK4 669 aa24.97■■□□□ 1.59
C9orf3-208ENST00000451893 MTA3Q9BTC8 594 aa24.97■■□□□ 1.59
C9orf3-208ENST00000451893 KATNAL1Q9BW62 490 aa24.97■■□□□ 1.59
C9orf3-208ENST00000451893 LY9Q9HBG7 655 aa24.97■■□□□ 1.59
C9orf3-208ENST00000451893 CALM1P0DP23 149 aa24.96■■□□□ 1.59
C9orf3-208ENST00000451893 CALM2P0DP24 149 aa24.96■■□□□ 1.59
C9orf3-208ENST00000451893 CALM3P0DP25 149 aa24.96■■□□□ 1.59
C9orf3-208ENST00000451893 ARHGAP1Q07960 439 aa24.96■■□□□ 1.59
C9orf3-208ENST00000451893 BFSP2Q13515 415 aa24.96■■□□□ 1.59
C9orf3-208ENST00000451893 C16orf59Q7L2K0 433 aa24.96■■□□□ 1.59
C9orf3-208ENST00000451893 DEFB128Q7Z7B8 93 aa24.96■■□□□ 1.59
C9orf3-208ENST00000451893 HERVK_113Q902F9 699 aa24.96■■□□□ 1.59
C9orf3-208ENST00000451893 MAP3K14Q99558 947 aa24.96■■□□□ 1.59
C9orf3-208ENST00000451893 WNT8AQ9H1J5 351 aa24.96■■□□□ 1.59
C9orf3-208ENST00000451893 DDX41Q9UJV9 622 aaKnown RBP24.96■■□□□ 1.59
C9orf3-208ENST00000451893 SLC12A7Q9Y666 1083 aa24.96■■□□□ 1.59
C9orf3-208ENST00000451893 OPLAHO14841 1288 aa24.95■■□□□ 1.58
C9orf3-208ENST00000451893 CYTH3O43739 400 aa24.95■■□□□ 1.58
C9orf3-208ENST00000451893 SORBS3O60504 671 aa24.95■■□□□ 1.58
C9orf3-208ENST00000451893 PFKMP08237 780 aa24.95■■□□□ 1.58
C9orf3-208ENST00000451893 ACTN1P12814 892 aa24.95■■□□□ 1.58
C9orf3-208ENST00000451893 RAB30Q15771 203 aa24.95■■□□□ 1.58
C9orf3-208ENST00000451893 PTGISQ16647 500 aa24.95■■□□□ 1.58
C9orf3-208ENST00000451893 GNPTABQ3T906 1256 aa24.95■■□□□ 1.58
C9orf3-208ENST00000451893 C7orf31Q8N865 590 aa24.95■■□□□ 1.58
C9orf3-208ENST00000451893 TTYH1Q9H313 450 aaPredicted RBP24.95■■□□□ 1.58
C9orf3-208ENST00000451893 SH2B2O14492 632 aaPredicted RBP24.94■■□□□ 1.58
C9orf3-208ENST00000451893 GHRHRQ02643 423 aa24.94■■□□□ 1.58
C9orf3-208ENST00000451893 SPATA33Q96N06 139 aa24.94■■□□□ 1.58
C9orf3-208ENST00000451893 ALG1Q9BT22 464 aa24.94■■□□□ 1.58
C9orf3-208ENST00000451893 SPZ1Q9BXG8 430 aa24.94■■□□□ 1.58
C9orf3-208ENST00000451893 C22orf23Q9BZE7 217 aa24.94■■□□□ 1.58
C9orf3-208ENST00000451893 FTOQ9C0B1 505 aaKnown RBP eCLIP24.94■■□□□ 1.58
C9orf3-208ENST00000451893 MLXIPQ9HAP2 919 aa24.94■■□□□ 1.58
C9orf3-208ENST00000451893 SLC4A7Q9Y6M7 1214 aa24.94■■□□□ 1.58
C9orf3-208ENST00000451893 GRXCR1A8MXD5 290 aa24.93■■□□□ 1.58
C9orf3-208ENST00000451893 MAFAQ8NHW3 353 aaPredicted RBP24.93■■□□□ 1.58
C9orf3-208ENST00000451893 PPTC7Q8NI37 304 aa24.93■■□□□ 1.58
C9orf3-208ENST00000451893 PBX4Q9BYU1 374 aa24.93■■□□□ 1.58
C9orf3-208ENST00000451893 ZNF576Q9H609 170 aa24.93■■□□□ 1.58
C9orf3-208ENST00000451893 GGPS1O95749 300 aa24.92■■□□□ 1.58
C9orf3-208ENST00000451893 RXRAP19793 462 aa24.92■■□□□ 1.58
C9orf3-208ENST00000451893 RFC2P35250 354 aa24.92■■□□□ 1.58
C9orf3-208ENST00000451893 RBM25P49756 843 aaKnown RBP24.92■■□□□ 1.58
C9orf3-208ENST00000451893 SLC35G1Q2M3R5 365 aa24.92■■□□□ 1.58
C9orf3-208ENST00000451893 VSIG10LQ86VR7 867 aa24.92■■□□□ 1.58
C9orf3-208ENST00000451893 LRRC2Q9BYS8 371 aa24.92■■□□□ 1.58
C9orf3-208ENST00000451893 NOP56O00567 594 aaKnown RBP24.91■■□□□ 1.58
C9orf3-208ENST00000451893 ZNF286BP0CG31 522 aa24.91■■□□□ 1.58
C9orf3-208ENST00000451893 LIFRP42702 1097 aa24.91■■□□□ 1.58
C9orf3-208ENST00000451893 PSEN2P49810 448 aa24.91■■□□□ 1.58
C9orf3-208ENST00000451893 RAB11FIP4Q86YS3 637 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms