RNA–Protein interactions for RNA: ENST00000447872.5

VSTM1-206, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene VSTM1, Length 1,041 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-206ENST00000447872 NOD1Q9Y239 953 aa12.09□□□□□ -0.47
VSTM1-206ENST00000447872 MRPL11Q9Y3B7 192 aaKnown RBP12.09□□□□□ -0.47
VSTM1-206ENST00000447872 PCDHA11Q9Y5I1 949 aa12.09□□□□□ -0.47
VSTM1-206ENST00000447872 PITPNM1O00562 1244 aa12.08□□□□□ -0.48
VSTM1-206ENST00000447872 GH1P01241 217 aa12.08□□□□□ -0.48
VSTM1-206ENST00000447872 BFSP2Q13515 415 aa12.08□□□□□ -0.48
VSTM1-206ENST00000447872 ADGRE1Q14246 886 aa12.08□□□□□ -0.48
VSTM1-206ENST00000447872 STXBP2Q15833 593 aa12.08□□□□□ -0.48
VSTM1-206ENST00000447872 CCDC85BQ15834 202 aaPredicted RBP12.08□□□□□ -0.48
VSTM1-206ENST00000447872 PPP2R2DQ66LE6 453 aa12.08□□□□□ -0.48
VSTM1-206ENST00000447872 CCDC62Q6P9F0 684 aa12.08□□□□□ -0.48
VSTM1-206ENST00000447872 FBXO11Q86XK2 927 aa12.08□□□□□ -0.48
VSTM1-206ENST00000447872 SYTL5Q8TDW5 730 aaPredicted RBP12.08□□□□□ -0.48
VSTM1-206ENST00000447872 AFG1LQ8WV93 481 aa12.08□□□□□ -0.48
VSTM1-206ENST00000447872 ATXN2LQ8WWM7 1075 aaKnown RBP12.08□□□□□ -0.48
VSTM1-206ENST00000447872 TBC1D5Q92609 795 aa12.08□□□□□ -0.48
VSTM1-206ENST00000447872 VWCEQ96DN2 955 aa12.08□□□□□ -0.48
VSTM1-206ENST00000447872 TAAR1Q96RJ0 339 aa12.08□□□□□ -0.48
VSTM1-206ENST00000447872 FTOQ9C0B1 505 aaKnown RBP eCLIP12.08□□□□□ -0.48
VSTM1-206ENST00000447872 CNNM2Q9H8M5 875 aa12.08□□□□□ -0.48
VSTM1-206ENST00000447872 BDP1A6H8Y1 2624 aa12.07□□□□□ -0.48
VSTM1-206ENST00000447872 EIF3JO75822 258 aaKnown RBP12.07□□□□□ -0.48
VSTM1-206ENST00000447872 ARIH2O95376 493 aa12.07□□□□□ -0.48
VSTM1-206ENST00000447872 IQCF3P0C7M6 154 aa12.07□□□□□ -0.48
VSTM1-206ENST00000447872 MYOGP15173 224 aa12.07□□□□□ -0.48
VSTM1-206ENST00000447872 PTGISQ16647 500 aa12.07□□□□□ -0.48
VSTM1-206ENST00000447872 LY6KQ17RY6 165 aa12.07□□□□□ -0.48
VSTM1-206ENST00000447872 QRICH1Q2TAL8 776 aa12.07□□□□□ -0.48
VSTM1-206ENST00000447872 TMEM67Q5HYA8 995 aa12.07□□□□□ -0.48
VSTM1-206ENST00000447872 ARHGEF16Q5VV41 709 aa12.07□□□□□ -0.48
VSTM1-206ENST00000447872 PPP1R13LQ8WUF5 828 aa12.07□□□□□ -0.48
VSTM1-206ENST00000447872 TSPYL2Q9H2G4 693 aaPredicted RBP12.07□□□□□ -0.48
VSTM1-206ENST00000447872 JMJD4Q9H9V9 463 aa12.07□□□□□ -0.48
VSTM1-206ENST00000447872 COL20A1Q9P218 1284 aa12.07□□□□□ -0.48
VSTM1-206ENST00000447872 MUC6Q6W4X9 2439 aa12.06□□□□□ -0.48
VSTM1-206ENST00000447872 CASTP20810 708 aaKnown RBP12.06□□□□□ -0.48
VSTM1-206ENST00000447872 MRPS5P82675 430 aaKnown RBP12.06□□□□□ -0.48
VSTM1-206ENST00000447872 DGKDQ16760 1214 aa12.06□□□□□ -0.48
VSTM1-206ENST00000447872 IFIT1BQ5T764 474 aaKnown RBP12.06□□□□□ -0.48
VSTM1-206ENST00000447872 CHST3Q7LGC8 479 aa12.06□□□□□ -0.48
VSTM1-206ENST00000447872 CCDC155Q8N6L0 562 aa12.06□□□□□ -0.48
VSTM1-206ENST00000447872 PHOSPHO2Q8TCD6 241 aa12.06□□□□□ -0.48
VSTM1-206ENST00000447872 ASB2Q96Q27 587 aa12.06□□□□□ -0.48
VSTM1-206ENST00000447872 AMNQ9BXJ7 453 aa12.06□□□□□ -0.48
VSTM1-206ENST00000447872 THEGQ9P2T0 379 aa12.06□□□□□ -0.48
VSTM1-206ENST00000447872 KIF28PB7ZC32 967 aa12.05□□□□□ -0.48
VSTM1-206ENST00000447872 KLRF2D3W0D1 207 aa12.05□□□□□ -0.48
VSTM1-206ENST00000447872 CFBP00751 764 aa12.05□□□□□ -0.48
VSTM1-206ENST00000447872 NR3C2P08235 984 aa12.05□□□□□ -0.48
VSTM1-206ENST00000447872 MMP3P08254 477 aa12.05□□□□□ -0.48
VSTM1-206ENST00000447872 EIF2AK2P19525 551 aaKnown RBP12.05□□□□□ -0.48
VSTM1-206ENST00000447872 ARHGAP1Q07960 439 aa12.05□□□□□ -0.48
VSTM1-206ENST00000447872 LAMC2Q13753 1193 aa12.05□□□□□ -0.48
VSTM1-206ENST00000447872 CASC1Q6TDU7 716 aa12.05□□□□□ -0.48
VSTM1-206ENST00000447872 SESTD1Q86VW0 696 aa12.05□□□□□ -0.48
VSTM1-206ENST00000447872 IL27Q8NEV9 243 aa12.05□□□□□ -0.48
VSTM1-206ENST00000447872 CAGE1Q8TC20 777 aa12.05□□□□□ -0.48
VSTM1-206ENST00000447872 SLC9A7Q96T83 725 aa12.05□□□□□ -0.48
VSTM1-206ENST00000447872 CHMP5Q9NZZ3 219 aa12.05□□□□□ -0.48
VSTM1-206ENST00000447872 DDX41Q9UJV9 622 aaKnown RBP12.05□□□□□ -0.48
VSTM1-206ENST00000447872 MRVI1Q9Y6F6 885 aa12.05□□□□□ -0.48
VSTM1-206ENST00000447872 BAIAP3O94812 1187 aa12.04□□□□□ -0.48
VSTM1-206ENST00000447872 CA3P07451 260 aa12.04□□□□□ -0.48
VSTM1-206ENST00000447872 TRDNQ13061 729 aa12.04□□□□□ -0.48
VSTM1-206ENST00000447872 TRAF1Q13077 416 aa12.04□□□□□ -0.48
VSTM1-206ENST00000447872 GDF6Q6KF10 455 aaPredicted RBP12.04□□□□□ -0.48
VSTM1-206ENST00000447872 HERC6Q8IVU3 1022 aa12.04□□□□□ -0.48
VSTM1-206ENST00000447872 DHX37Q8IY37 1157 aaKnown RBP12.04□□□□□ -0.48
VSTM1-206ENST00000447872 MICALL1Q8N3F8 863 aa12.04□□□□□ -0.48
VSTM1-206ENST00000447872 STAG2Q8N3U4 1231 aa12.04□□□□□ -0.48
VSTM1-206ENST00000447872 C7orf31Q8N865 590 aa12.04□□□□□ -0.48
VSTM1-206ENST00000447872 SPRYD3Q8NCJ5 442 aa12.04□□□□□ -0.48
VSTM1-206ENST00000447872 ADAMTS19Q8TE59 1207 aa12.04□□□□□ -0.48
VSTM1-206ENST00000447872 AFAP1L1Q8TED9 768 aa12.04□□□□□ -0.48
VSTM1-206ENST00000447872 KAT2BQ92831 832 aa12.04□□□□□ -0.48
VSTM1-206ENST00000447872 EMID1Q96A84 441 aaPredicted RBP12.04□□□□□ -0.48
VSTM1-206ENST00000447872 UHRF1Q96T88 793 aaPredicted RBP12.04□□□□□ -0.48
VSTM1-206ENST00000447872 USP26Q9BXU7 913 aa12.04□□□□□ -0.48
VSTM1-206ENST00000447872 PXMP2Q9NR77 195 aa12.04□□□□□ -0.48
VSTM1-206ENST00000447872 MAP3K20Q9NYL2 800 aaKnown RBP12.04□□□□□ -0.48
VSTM1-206ENST00000447872 PCDHA1Q9Y5I3 950 aa12.04□□□□□ -0.48
VSTM1-206ENST00000447872 MCM3APO60318 1980 aa12.04□□□□□ -0.48
VSTM1-206ENST00000447872 CHD9Q3L8U1 2897 aa12.04□□□□□ -0.48
VSTM1-206ENST00000447872 ZBTB5O15062 677 aa12.03□□□□□ -0.48
VSTM1-206ENST00000447872 GTPBP6O43824 516 aaPredicted RBP12.03□□□□□ -0.48
VSTM1-206ENST00000447872 PARNO95453 639 aaKnown RBP12.03□□□□□ -0.48
VSTM1-206ENST00000447872 SELPP16109 830 aa12.03□□□□□ -0.48
VSTM1-206ENST00000447872 DDIT3P35638 169 aa12.03□□□□□ -0.48
VSTM1-206ENST00000447872 KCNJ6P48051 423 aa12.03□□□□□ -0.48
VSTM1-206ENST00000447872 HSD17B4P51659 736 aa12.03□□□□□ -0.48
VSTM1-206ENST00000447872 GSE1Q14687 1217 aa12.03□□□□□ -0.48
VSTM1-206ENST00000447872 KCNV1Q6PIU1 500 aa12.03□□□□□ -0.48
VSTM1-206ENST00000447872 SAMD3Q8N6K7 520 aa12.03□□□□□ -0.48
VSTM1-206ENST00000447872 PPTC7Q8NI37 304 aa12.03□□□□□ -0.48
VSTM1-206ENST00000447872 RUFY2Q8WXA3 655 aa12.03□□□□□ -0.48
VSTM1-206ENST00000447872 KATNAL1Q9BW62 490 aa12.03□□□□□ -0.48
VSTM1-206ENST00000447872 U3KPZ7 1027 aaPredicted RBP12.03□□□□□ -0.48
VSTM1-206ENST00000447872 PALM3A6NDB9 673 aaPredicted RBP12.02□□□□□ -0.49
VSTM1-206ENST00000447872 OPLAHO14841 1288 aa12.02□□□□□ -0.49
VSTM1-206ENST00000447872 PPFIA4O75335 1185 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms