RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 SYT17Q9BSW7 474 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 NUP58Q9BVL2 599 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 NAA15Q9BXJ9 866 aaKnown RBP3.17□□□□□ -1.9
LINC00393-201ENST00000443621 TRIM9Q9C026 710 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 TRIM5Q9C035 493 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 FTOQ9C0B1 505 aaKnown RBP eCLIP3.17□□□□□ -1.9
LINC00393-201ENST00000443621 TMEM39BQ9GZU3 492 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 UBA5Q9GZZ9 404 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 DNAJC25Q9H1X3 360 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 ST6GALNAC4Q9H4F1 302 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 THAP9Q9H5L6 903 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 TTC12Q9H892 705 aaPredicted RBP3.17□□□□□ -1.9
LINC00393-201ENST00000443621 VEZTQ9HBM0 779 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 GPCPD1Q9NPB8 672 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 PICK1Q9NRD5 415 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 OLFML3Q9NRN5 406 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 TBC1D7Q9P0N9 293 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 DDX25Q9UHL0 483 aaKnown RBP3.17□□□□□ -1.9
LINC00393-201ENST00000443621 MAN1B1Q9UKM7 699 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 ODF2LQ9ULJ1 636 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 PPP1R9AQ9ULJ8 1098 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 KCNH4Q9UQ05 1017 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 ZBTB12Q9Y330 459 aaPredicted RBP3.17□□□□□ -1.9
LINC00393-201ENST00000443621 AFG3L2Q9Y4W6 797 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 PTPRFP10586 1907 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 PFASO15067 1338 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 ZNF536O15090 1300 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 UBE4BO95155 1302 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 PHLPP2Q6ZVD8 1323 aa3.17□□□□□ -1.9
LINC00393-201ENST00000443621 BAZ2BQ9UIF8 2168 aaKnown RBP3.17□□□□□ -1.9
LINC00393-201ENST00000443621 A0A0G2JLL6 359 aaPredicted RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 A0A1B0GTH6 734 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 CLRN2A0PK11 232 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 PSDA5PKW4 1024 aaPredicted RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 GLTPD2A6NH11 291 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 SPDYE5A6NIY4 337 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 PPP1R3GB7ZBB8 358 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 H0YCG3 227 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 UBE2Q2LH0YL09 131 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 VWA5AO00534 786 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 OPLAHO14841 1288 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 MAPK13O15264 365 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 EIF3DO15371 548 aaKnown RBP eCLIP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 STRNO43815 780 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 EDIL3O43854 480 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 STX10O60499 249 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 PSMD10O75832 226 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 EYA4O95677 639 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 SLC25A27O95847 323 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 TPM2P07951 284 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 VCAM1P19320 739 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 BMP6P22004 513 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 FECHP22830 423 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 SFPQP23246 707 aaKnown RBP eCLIP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 GUCY2CP25092 1073 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 DSG3P32926 999 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 ICAM3P32942 547 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 TECP42680 631 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 ECE1P42892 770 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 DNM2P50570 870 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 ZNF75DP51815 510 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 ZNF131P52739 623 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 CACNB3P54284 484 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 RTP1P59025 263 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 CDK17Q00537 523 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 KRT76Q01546 638 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 PAK1Q13153 545 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 PPIL2Q13356 520 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 CUL4BQ13620 913 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 RRP1BQ14684 758 aaKnown RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 EPHA7Q15375 998 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 IL17AQ16552 155 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 BMT2Q1RMZ1 405 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 DPCR1Q3MIW9 517 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 GNPTABQ3T906 1256 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 LDLRAD1Q5T700 205 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 ANGEL2Q5VTE6 544 aaKnown RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 TTBK2Q6IQ55 1244 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 ZNF746Q6NUN9 644 aaPredicted RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 ZNF662Q6ZS27 426 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 OTOP1Q7RTM1 612 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 PRRT2Q7Z6L0 340 aaPredicted RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 SLC51AQ86UW1 340 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 VSIG10LQ86VR7 867 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 HOMER1Q86YM7 354 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 RIOX2Q8IUF8 465 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 CNGA4Q8IV77 575 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 CCDC65Q8IXS2 484 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 ZC3H3Q8IXZ2 948 aaKnown RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 DRC7Q8IY82 874 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 SMAP1Q8IYB5 467 aaPredicted RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 ABRAQ8N0Z2 381 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 ADSSL1Q8N142 457 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 ZNF710Q8N1W2 664 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 MSL3Q8N5Y2 521 aaKnown RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 SHCBP1Q8NEM2 672 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 REPS2Q8NFH8 660 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 GOLGA5Q8TBA6 731 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 NSUN6Q8TEA1 469 aaKnown RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 PIBF1Q8WXW3 757 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms