RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 FRMPD4Q14CM0 1322 aa14.13□□□□□ -0.15
USP1-203ENST00000442679 RBBP6Q7Z6E9 1792 aaKnown RBP14.12□□□□□ -0.15
USP1-203ENST00000442679 ADCY6O43306 1168 aa14.12□□□□□ -0.15
USP1-203ENST00000442679 SMPD1P17405 629 aa14.12□□□□□ -0.15
USP1-203ENST00000442679 XBP1P17861 261 aa14.12□□□□□ -0.15
USP1-203ENST00000442679 CLK2P49760 499 aaKnown RBP14.12□□□□□ -0.15
USP1-203ENST00000442679 TMEM63BQ5T3F8 832 aa14.12□□□□□ -0.15
USP1-203ENST00000442679 XRRA1Q6P2D8 792 aa14.12□□□□□ -0.15
USP1-203ENST00000442679 FAM177A1Q8N128 213 aaPredicted RBP14.12□□□□□ -0.15
USP1-203ENST00000442679 REXO1Q8N1G1 1221 aaKnown RBP14.12□□□□□ -0.15
USP1-203ENST00000442679 ANKLE1Q8NAG6 615 aa14.12□□□□□ -0.15
USP1-203ENST00000442679 SCFD2Q8WU76 684 aa14.12□□□□□ -0.15
USP1-203ENST00000442679 TMX3Q96JJ7 454 aa14.12□□□□□ -0.15
USP1-203ENST00000442679 ALG1Q9BT22 464 aa14.12□□□□□ -0.15
USP1-203ENST00000442679 ADAMTS3O15072 1205 aa14.11□□□□□ -0.15
USP1-203ENST00000442679 FARP2O94887 1054 aaPredicted RBP14.11□□□□□ -0.15
USP1-203ENST00000442679 PGK1P00558 417 aa14.11□□□□□ -0.15
USP1-203ENST00000442679 TXNP10599 105 aaKnown RBP14.11□□□□□ -0.15
USP1-203ENST00000442679 RGS19P49795 217 aa14.11□□□□□ -0.15
USP1-203ENST00000442679 MRPS9P82933 396 aaKnown RBP14.11□□□□□ -0.15
USP1-203ENST00000442679 AP3B2Q13367 1082 aa14.11□□□□□ -0.15
USP1-203ENST00000442679 TTLL4Q14679 1199 aa14.11□□□□□ -0.15
USP1-203ENST00000442679 DUSP28Q4G0W2 176 aa14.11□□□□□ -0.15
USP1-203ENST00000442679 GJC2Q5T442 439 aaPredicted RBP14.11□□□□□ -0.15
USP1-203ENST00000442679 PCNX4Q63HM2 1172 aa14.11□□□□□ -0.15
USP1-203ENST00000442679 MCTP2Q6DN12 878 aa14.11□□□□□ -0.15
USP1-203ENST00000442679 RNF180Q86T96 592 aa14.11□□□□□ -0.15
USP1-203ENST00000442679 PGBD1Q96JS3 809 aa14.11□□□□□ -0.15
USP1-203ENST00000442679 AP5M1Q9H0R1 490 aa14.11□□□□□ -0.15
USP1-203ENST00000442679 SPC25Q9HBM1 224 aa14.11□□□□□ -0.15
USP1-203ENST00000442679 RTEL1Q9NZ71 1219 aa14.11□□□□□ -0.15
USP1-203ENST00000442679 PCDHA4Q9UN74 947 aa14.11□□□□□ -0.15
USP1-203ENST00000442679 KCNJ14Q9UNX9 436 aa14.11□□□□□ -0.15
USP1-203ENST00000442679 GNEQ9Y223 722 aaKnown RBP14.11□□□□□ -0.15
USP1-203ENST00000442679 DYNC1LI2O43237 492 aaPredicted RBP14.1□□□□□ -0.15
USP1-203ENST00000442679 STAM2O75886 525 aa14.1□□□□□ -0.15
USP1-203ENST00000442679 RGS20O76081 388 aa14.1□□□□□ -0.15
USP1-203ENST00000442679 MNX1P50219 401 aaPredicted RBP14.1□□□□□ -0.15
USP1-203ENST00000442679 GJA9P57773 515 aa14.1□□□□□ -0.15
USP1-203ENST00000442679 LRRC41Q15345 812 aa14.1□□□□□ -0.15
USP1-203ENST00000442679 GALNT17Q6IS24 598 aa14.1□□□□□ -0.15
USP1-203ENST00000442679 PAWRQ96IZ0 340 aaKnown RBP14.1□□□□□ -0.15
USP1-203ENST00000442679 ANO3Q9BYT9 981 aa14.1□□□□□ -0.15
USP1-203ENST00000442679 GJB4Q9NTQ9 266 aa14.1□□□□□ -0.15
USP1-203ENST00000442679 Q9Y3F1 56 aa14.1□□□□□ -0.15
USP1-203ENST00000442679 MRVI1Q9Y6F6 885 aa14.1□□□□□ -0.15
USP1-203ENST00000442679 SYNRGQ9UMZ2 1314 aa14.1□□□□□ -0.15
USP1-203ENST00000442679 KBTBD13C9JR72 458 aa14.09□□□□□ -0.15
USP1-203ENST00000442679 DNM1LO00429 736 aa14.09□□□□□ -0.15
USP1-203ENST00000442679 NKRFO15226 690 aaKnown RBP eCLIP14.09□□□□□ -0.15
USP1-203ENST00000442679 ADAMTS4O75173 837 aa14.09□□□□□ -0.15
USP1-203ENST00000442679 ARIH2O95376 493 aa14.09□□□□□ -0.15
USP1-203ENST00000442679 C6orf222P0C671 652 aaPredicted RBP14.09□□□□□ -0.15
USP1-203ENST00000442679 PTGS1P23219 599 aa14.09□□□□□ -0.15
USP1-203ENST00000442679 IRX5P78411 483 aaPredicted RBP14.09□□□□□ -0.15
USP1-203ENST00000442679 LY6KQ17RY6 165 aa14.09□□□□□ -0.15
USP1-203ENST00000442679 GNPTABQ3T906 1256 aa14.09□□□□□ -0.15
USP1-203ENST00000442679 CCDC62Q6P9F0 684 aa14.09□□□□□ -0.15
USP1-203ENST00000442679 KCNV1Q6PIU1 500 aa14.09□□□□□ -0.15
USP1-203ENST00000442679 NECAB2Q7Z6G3 386 aa14.09□□□□□ -0.15
USP1-203ENST00000442679 UBE2Q1Q7Z7E8 422 aa14.09□□□□□ -0.15
USP1-203ENST00000442679 TLK2Q86UE8 772 aa14.09□□□□□ -0.15
USP1-203ENST00000442679 BLIDQ8IZY5 108 aa14.09□□□□□ -0.15
USP1-203ENST00000442679 RASGRP4Q8TDF6 673 aa14.09□□□□□ -0.15
USP1-203ENST00000442679 DIS3LQ8TF46 1054 aaKnown RBP14.09□□□□□ -0.15
USP1-203ENST00000442679 PHF20Q9BVI0 1012 aa14.09□□□□□ -0.15
USP1-203ENST00000442679 UPF3AQ9H1J1 476 aaKnown RBP14.09□□□□□ -0.15
USP1-203ENST00000442679 DDX41Q9UJV9 622 aaKnown RBP14.09□□□□□ -0.15
USP1-203ENST00000442679 TGFB3P10600 412 aa14.08□□□□□ -0.16
USP1-203ENST00000442679 SREBF1P36956 1147 aa14.08□□□□□ -0.16
USP1-203ENST00000442679 FOSBP53539 338 aa14.08□□□□□ -0.16
USP1-203ENST00000442679 HMGN5P82970 282 aaKnown RBP14.08□□□□□ -0.16
USP1-203ENST00000442679 TRIM29Q14134 588 aa14.08□□□□□ -0.16
USP1-203ENST00000442679 NPY5RQ15761 445 aa14.08□□□□□ -0.16
USP1-203ENST00000442679 GNASQ5JWF2 1037 aa14.08□□□□□ -0.16
USP1-203ENST00000442679 NLRX1Q86UT6 975 aa14.08□□□□□ -0.16
USP1-203ENST00000442679 DAGLBQ8NCG7 672 aa14.08□□□□□ -0.16
USP1-203ENST00000442679 KLHDC9Q8NEP7 349 aa14.08□□□□□ -0.16
USP1-203ENST00000442679 OR6J1Q8NGC5 347 aa14.08□□□□□ -0.16
USP1-203ENST00000442679 COPS5Q92905 334 aa14.08□□□□□ -0.16
USP1-203ENST00000442679 INPP4AQ96PE3 977 aaPredicted RBP14.08□□□□□ -0.16
USP1-203ENST00000442679 C11orf49Q9H6J7 331 aa14.08□□□□□ -0.16
USP1-203ENST00000442679 MYADML2A6NDP7 307 aa14.07□□□□□ -0.16
USP1-203ENST00000442679 SPATA31C2B4DYI2 1134 aa14.07□□□□□ -0.16
USP1-203ENST00000442679 CTAGE5O15320 804 aa14.07□□□□□ -0.16
USP1-203ENST00000442679 GH1P01241 217 aa14.07□□□□□ -0.16
USP1-203ENST00000442679 ITGB5P18084 799 aa14.07□□□□□ -0.16
USP1-203ENST00000442679 ICAM3P32942 547 aa14.07□□□□□ -0.16
USP1-203ENST00000442679 ZNF76P36508 570 aa14.07□□□□□ -0.16
USP1-203ENST00000442679 NKX3-2P78367 333 aa14.07□□□□□ -0.16
USP1-203ENST00000442679 ARHGAP4P98171 946 aa14.07□□□□□ -0.16
USP1-203ENST00000442679 BEX3Q00994 111 aa14.07□□□□□ -0.16
USP1-203ENST00000442679 KCNA10Q16322 511 aa14.07□□□□□ -0.16
USP1-203ENST00000442679 FSCN1Q16658 493 aaKnown RBP14.07□□□□□ -0.16
USP1-203ENST00000442679 FAM184AQ8NB25 1140 aa14.07□□□□□ -0.16
USP1-203ENST00000442679 TSEN34Q9BSV6 310 aaKnown RBP14.07□□□□□ -0.16
USP1-203ENST00000442679 UBIAD1Q9Y5Z9 338 aa14.07□□□□□ -0.16
USP1-203ENST00000442679 MCM3APO60318 1980 aa14.07□□□□□ -0.16
USP1-203ENST00000442679 LRRC37A2A6NM11 1700 aa14.07□□□□□ -0.16
USP1-203ENST00000442679 KIAA0100Q14667 2235 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms