RNA–Protein interactions for RNA: ENST00000437929.5

TOP3B-208, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-208ENST00000437929 SHCBP1Q8NEM2 672 aa8.34□□□□□ -1.07
TOP3B-208ENST00000437929 ZDHHC1Q8WTX9 485 aa8.34□□□□□ -1.07
TOP3B-208ENST00000437929 ATXN2LQ8WWM7 1075 aaKnown RBP8.34□□□□□ -1.07
TOP3B-208ENST00000437929 NECAB3Q96P71 396 aaPredicted RBP8.34□□□□□ -1.07
TOP3B-208ENST00000437929 ASB2Q96Q27 587 aa8.34□□□□□ -1.07
TOP3B-208ENST00000437929 EHD4Q9H223 541 aa8.34□□□□□ -1.07
TOP3B-208ENST00000437929 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.34□□□□□ -1.072e-7■■■■■ 51.8
TOP3B-208ENST00000437929 STARD7Q9NQZ5 370 aa8.34□□□□□ -1.07
TOP3B-208ENST00000437929 SLC5A4Q9NY91 659 aa8.34□□□□□ -1.07
TOP3B-208ENST00000437929 HOXC10Q9NYD6 342 aa8.34□□□□□ -1.07
TOP3B-208ENST00000437929 TLR7Q9NYK1 1049 aaKnown RBP8.34□□□□□ -1.07
TOP3B-208ENST00000437929 PLXNA1Q9UIW2 1896 aa8.34□□□□□ -1.07
TOP3B-208ENST00000437929 TTC28Q96AY4 2481 aa8.34□□□□□ -1.08
TOP3B-208ENST00000437929 SMCHD1A6NHR9 2005 aa8.33□□□□□ -1.08
TOP3B-208ENST00000437929 H3BRB1 525 aa8.33□□□□□ -1.08
TOP3B-208ENST00000437929 FLOT1O75955 427 aa8.33□□□□□ -1.08
TOP3B-208ENST00000437929 GNAI2P04899 355 aa8.33□□□□□ -1.08
TOP3B-208ENST00000437929 POLR3DP05423 398 aaPredicted RBP8.33□□□□□ -1.08
TOP3B-208ENST00000437929 ACRP10323 421 aa8.33□□□□□ -1.08
TOP3B-208ENST00000437929 FCER1AP12319 257 aa8.33□□□□□ -1.08
TOP3B-208ENST00000437929 RHOQP17081 205 aa8.33□□□□□ -1.08
TOP3B-208ENST00000437929 SMCPP49901 116 aaPredicted RBP8.33□□□□□ -1.08
TOP3B-208ENST00000437929 POU4F2Q12837 409 aa8.33□□□□□ -1.08
TOP3B-208ENST00000437929 ADGRE1Q14246 886 aa8.33□□□□□ -1.08
TOP3B-208ENST00000437929 TEAD4Q15561 434 aa8.33□□□□□ -1.08
TOP3B-208ENST00000437929 C4orf17Q53FE4 359 aa8.33□□□□□ -1.08
TOP3B-208ENST00000437929 NAV1Q8NEY1 1877 aa8.33□□□□□ -1.08
TOP3B-208ENST00000437929 RNF217Q8TC41 542 aa8.33□□□□□ -1.08
TOP3B-208ENST00000437929 ZFP42Q96MM3 310 aa8.33□□□□□ -1.08
TOP3B-208ENST00000437929 MMP19Q99542 508 aa8.33□□□□□ -1.08
TOP3B-208ENST00000437929 IRX2Q9BZI1 471 aaPredicted RBP8.33□□□□□ -1.08
TOP3B-208ENST00000437929 CCDC8Q9H0W5 538 aaPredicted RBP8.33□□□□□ -1.08
TOP3B-208ENST00000437929 MROH8Q9H579 483 aa8.33□□□□□ -1.08
TOP3B-208ENST00000437929 TUT1Q9H6E5 874 aaKnown RBP8.33□□□□□ -1.08
TOP3B-208ENST00000437929 ANTXR1Q9H6X2 564 aa8.33□□□□□ -1.08
TOP3B-208ENST00000437929 DBNLQ9UJU6 430 aaKnown RBP8.33□□□□□ -1.08
TOP3B-208ENST00000437929 COL11A1P12107 1806 aaPredicted RBP8.32□□□□□ -1.08
TOP3B-208ENST00000437929 MYADML2A6NDP7 307 aa8.32□□□□□ -1.08
TOP3B-208ENST00000437929 DCDC2CA8MYV0 355 aa8.32□□□□□ -1.08
TOP3B-208ENST00000437929 EML1O00423 815 aa8.32□□□□□ -1.08
TOP3B-208ENST00000437929 ADAMTS4O75173 837 aa8.32□□□□□ -1.08
TOP3B-208ENST00000437929 TIMP1P01033 207 aa8.32□□□□□ -1.08
TOP3B-208ENST00000437929 ZNF865P0CJ78 1059 aaPredicted RBP8.32□□□□□ -1.08
TOP3B-208ENST00000437929 ACLYP53396 1101 aa8.32□□□□□ -1.08
TOP3B-208ENST00000437929 MRPS5P82675 430 aaKnown RBP8.32□□□□□ -1.08
TOP3B-208ENST00000437929 MTMR3Q13615 1198 aa8.32□□□□□ -1.08
TOP3B-208ENST00000437929 TMEM132BQ14DG7 1078 aa8.32□□□□□ -1.08
TOP3B-208ENST00000437929 TMEM240Q5SV17 173 aa8.32□□□□□ -1.08
TOP3B-208ENST00000437929 SND1Q7KZF4 910 aaKnown RBP eCLIP8.32□□□□□ -1.08
TOP3B-208ENST00000437929 C16orf59Q7L2K0 433 aa8.32□□□□□ -1.08
TOP3B-208ENST00000437929 LYSMD3Q7Z3D4 306 aa8.32□□□□□ -1.08
TOP3B-208ENST00000437929 ANKRD33Q7Z3H0 272 aa8.32□□□□□ -1.08
TOP3B-208ENST00000437929 GLYCTKQ8IVS8 523 aa8.32□□□□□ -1.08
TOP3B-208ENST00000437929 ABRAQ8N0Z2 381 aa8.32□□□□□ -1.08
TOP3B-208ENST00000437929 MICALL1Q8N3F8 863 aa8.32□□□□□ -1.08
TOP3B-208ENST00000437929 STAG2Q8N3U4 1231 aa8.32□□□□□ -1.08
TOP3B-208ENST00000437929 MB21D1Q8N884 522 aa8.32□□□□□ -1.08
TOP3B-208ENST00000437929 TINF2Q9BSI4 451 aa8.32□□□□□ -1.08
TOP3B-208ENST00000437929 NKX2-4Q9H2Z4 354 aa8.32□□□□□ -1.08
TOP3B-208ENST00000437929 DNMT3AQ9Y6K1 912 aaPredicted RBP8.32□□□□□ -1.08
TOP3B-208ENST00000437929 CHD9Q3L8U1 2897 aa8.32□□□□□ -1.08
TOP3B-208ENST00000437929 SYNRGQ9UMZ2 1314 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 ZNFX1Q9P2E3 1918 aaKnown RBP8.31□□□□□ -1.08
TOP3B-208ENST00000437929 SOWAHDA6NJG2 315 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 SURF6O75683 361 aaKnown RBP8.31□□□□□ -1.08
TOP3B-208ENST00000437929 CYP2D6P10635 497 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 AKR1A1P14550 325 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 CSF2RAP15509 400 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 RARSP54136 660 aaKnown RBP8.31□□□□□ -1.08
TOP3B-208ENST00000437929 TFF2Q03403 129 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 GABPAQ06546 454 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 PPIGQ13427 754 aaKnown RBP eCLIP8.31□□□□□ -1.089e-11■■■□□ 17.6
TOP3B-208ENST00000437929 KCNA10Q16322 511 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 AKNAD1Q5T1N1 836 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 MFSD5Q6N075 450 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 C16orf46Q6P387 395 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 ZNF365Q70YC5 407 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 NUP133Q8WUM0 1156 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 COL26A1Q96A83 441 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 DYNLL2Q96FJ2 89 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 RIOK1Q9BRS2 568 aaKnown RBP8.31□□□□□ -1.08
TOP3B-208ENST00000437929 SAP130Q9H0E3 1048 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 GPR108Q9NPR9 543 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 AAASQ9NRG9 546 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 FBXO28Q9NVF7 368 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 MCM9Q9NXL9 1143 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 CHD7Q9P2D1 2997 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 NRBP1Q9UHY1 535 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 ZHX1Q9UKY1 873 aaPredicted RBP8.31□□□□□ -1.08
TOP3B-208ENST00000437929 TBX21Q9UL17 535 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 PARP14Q460N5 1801 aa8.31□□□□□ -1.08
TOP3B-208ENST00000437929 GBF1Q92538 1859 aa8.3□□□□□ -1.08
TOP3B-208ENST00000437929 TCF20Q9UGU0 1960 aaKnown RBP8.3□□□□□ -1.08
TOP3B-208ENST00000437929 BCAR3O75815 825 aa8.3□□□□□ -1.08
TOP3B-208ENST00000437929 SLC25A27O95847 323 aa8.3□□□□□ -1.08
TOP3B-208ENST00000437929 TRIM27P14373 513 aa8.3□□□□□ -1.08
TOP3B-208ENST00000437929 AKR1B1P15121 316 aa8.3□□□□□ -1.08
TOP3B-208ENST00000437929 KCNQ1P51787 676 aa8.3□□□□□ -1.08
TOP3B-208ENST00000437929 ICA1Q05084 483 aa8.3□□□□□ -1.08
TOP3B-208ENST00000437929 KCTD2Q14681 263 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms