RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 VAT1LQ9HCJ6 419 aa16.79■□□□□ 0.28
TNFRSF1A-203ENST00000437813 DDX41Q9UJV9 622 aaKnown RBP16.79■□□□□ 0.28
TNFRSF1A-203ENST00000437813 PTPRSQ13332 1948 aa16.78■□□□□ 0.28
TNFRSF1A-203ENST00000437813 NR3C2P08235 984 aa16.78■□□□□ 0.28
TNFRSF1A-203ENST00000437813 GPNMBQ14956 572 aa16.78■□□□□ 0.28
TNFRSF1A-203ENST00000437813 STXBP2Q15833 593 aa16.78■□□□□ 0.28
TNFRSF1A-203ENST00000437813 MAP4K1Q92918 833 aa16.78■□□□□ 0.28
TNFRSF1A-203ENST00000437813 PDCD2LQ9BRP1 358 aa16.78■□□□□ 0.28
TNFRSF1A-203ENST00000437813 MAP3K20Q9NYL2 800 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1A-203ENST00000437813 U3KPZ7 1027 aaPredicted RBP16.78■□□□□ 0.28
TNFRSF1A-203ENST00000437813 E7EWF7 191 aa16.77■□□□□ 0.28
TNFRSF1A-203ENST00000437813 EIF3JO75822 258 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1A-203ENST00000437813 GH1P01241 217 aa16.77■□□□□ 0.28
TNFRSF1A-203ENST00000437813 PFKMP08237 780 aa16.77■□□□□ 0.28
TNFRSF1A-203ENST00000437813 EIF2AK2P19525 551 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1A-203ENST00000437813 RBL2Q08999 1139 aa16.77■□□□□ 0.28
TNFRSF1A-203ENST00000437813 COL9A3Q14050 684 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF1A-203ENST00000437813 ADGRE1Q14246 886 aa16.77■□□□□ 0.28
TNFRSF1A-203ENST00000437813 RAB30Q15771 203 aa16.77■□□□□ 0.28
TNFRSF1A-203ENST00000437813 BRDTQ58F21 947 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF1A-203ENST00000437813 SEPT14Q6ZU15 432 aa16.77■□□□□ 0.28
TNFRSF1A-203ENST00000437813 MB21D2Q8IYB1 491 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF1A-203ENST00000437813 RPUSD2Q8IZ73 545 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1A-203ENST00000437813 SAMD3Q8N6K7 520 aa16.77■□□□□ 0.28
TNFRSF1A-203ENST00000437813 IL31RAQ8NI17 732 aa16.77■□□□□ 0.28
TNFRSF1A-203ENST00000437813 IGDCC4Q8TDY8 1250 aa16.77■□□□□ 0.28
TNFRSF1A-203ENST00000437813 RUFY2Q8WXA3 655 aa16.77■□□□□ 0.28
TNFRSF1A-203ENST00000437813 GPHNQ9NQX3 736 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF1A-203ENST00000437813 FRMPD4Q14CM0 1322 aa16.76■□□□□ 0.27
TNFRSF1A-203ENST00000437813 NCOR1O75376 2440 aa16.76■□□□□ 0.27
TNFRSF1A-203ENST00000437813 HAS3O00219 553 aa16.76■□□□□ 0.27
TNFRSF1A-203ENST00000437813 CFBP00751 764 aa16.76■□□□□ 0.27
TNFRSF1A-203ENST00000437813 IQCF3P0C7M6 154 aa16.76■□□□□ 0.27
TNFRSF1A-203ENST00000437813 VSIG10LQ86VR7 867 aa16.76■□□□□ 0.27
TNFRSF1A-203ENST00000437813 DHX38Q92620 1227 aaKnown RBP16.76■□□□□ 0.27
TNFRSF1A-203ENST00000437813 MTIF3Q9H2K0 278 aaKnown RBP16.76■□□□□ 0.27
TNFRSF1A-203ENST00000437813 PCDHA1Q9Y5I3 950 aa16.76■□□□□ 0.27
TNFRSF1A-203ENST00000437813 DHX16O60231 1041 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-203ENST00000437813 F2P00734 622 aa16.75■□□□□ 0.27
TNFRSF1A-203ENST00000437813 RFC2P35250 354 aa16.75■□□□□ 0.27
TNFRSF1A-203ENST00000437813 IRX6P78412 446 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1A-203ENST00000437813 ARHGEF16Q5VV41 709 aa16.75■□□□□ 0.27
TNFRSF1A-203ENST00000437813 GDF6Q6KF10 455 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1A-203ENST00000437813 PIGSQ96S52 555 aa16.75■□□□□ 0.27
TNFRSF1A-203ENST00000437813 NKX2-4Q9H2Z4 354 aa16.75■□□□□ 0.27
TNFRSF1A-203ENST00000437813 PRDM12Q9H4Q4 367 aa16.75■□□□□ 0.27
TNFRSF1A-203ENST00000437813 PCDHA11Q9Y5I1 949 aa16.75■□□□□ 0.27
TNFRSF1A-203ENST00000437813 MUC3AQ02505 3323 aa16.74■□□□□ 0.27
TNFRSF1A-203ENST00000437813 IFIT3O14879 490 aaKnown RBP16.74■□□□□ 0.27
TNFRSF1A-203ENST00000437813 MYOGP15173 224 aa16.74■□□□□ 0.27
TNFRSF1A-203ENST00000437813 HOXA13P31271 388 aaPredicted RBP16.74■□□□□ 0.27
TNFRSF1A-203ENST00000437813 RABGGTBP53611 331 aa16.74■□□□□ 0.27
TNFRSF1A-203ENST00000437813 SP2Q02086 613 aa16.74■□□□□ 0.27
TNFRSF1A-203ENST00000437813 PGM5Q15124 567 aa16.74■□□□□ 0.27
TNFRSF1A-203ENST00000437813 FAM47CQ5HY64 1035 aa16.74■□□□□ 0.27
TNFRSF1A-203ENST00000437813 MYSM1Q5VVJ2 828 aa16.74■□□□□ 0.27
TNFRSF1A-203ENST00000437813 NCOA7Q8NI08 942 aa16.74■□□□□ 0.27
TNFRSF1A-203ENST00000437813 PPTC7Q8NI37 304 aa16.74■□□□□ 0.27
TNFRSF1A-203ENST00000437813 MSRAQ9UJ68 235 aa16.74■□□□□ 0.27
TNFRSF1A-203ENST00000437813 SLC4A7Q9Y6M7 1214 aa16.74■□□□□ 0.27
TNFRSF1A-203ENST00000437813 BDP1A6H8Y1 2624 aa16.73■□□□□ 0.27
TNFRSF1A-203ENST00000437813 PNMA6FA0A0J9YX94 578 aa16.73■□□□□ 0.27
TNFRSF1A-203ENST00000437813 TRDNQ13061 729 aa16.73■□□□□ 0.27
TNFRSF1A-203ENST00000437813 HIC1Q14526 733 aa16.73■□□□□ 0.27
TNFRSF1A-203ENST00000437813 TRIM71Q2Q1W2 868 aaKnown RBP16.73■□□□□ 0.27
TNFRSF1A-203ENST00000437813 TRAF7Q6Q0C0 670 aa16.73■□□□□ 0.27
TNFRSF1A-203ENST00000437813 CHST3Q7LGC8 479 aa16.73■□□□□ 0.27
TNFRSF1A-203ENST00000437813 DEFB128Q7Z7B8 93 aa16.73■□□□□ 0.27
TNFRSF1A-203ENST00000437813 MAP3K14Q99558 947 aa16.73■□□□□ 0.27
TNFRSF1A-203ENST00000437813 LY9Q9HBG7 655 aa16.73■□□□□ 0.27
TNFRSF1A-203ENST00000437813 GTF2IRD1Q9UHL9 959 aa16.73■□□□□ 0.27
TNFRSF1A-203ENST00000437813 RBM8AQ9Y5S9 174 aaKnown RBP16.73■□□□□ 0.27
TNFRSF1A-203ENST00000437813 PRRC2BQ5JSZ5 2229 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1A-203ENST00000437813 ATP2A2P16615 1042 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1A-203ENST00000437813 CASTP20810 708 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1A-203ENST00000437813 HOXC8P31273 242 aa16.72■□□□□ 0.27
TNFRSF1A-203ENST00000437813 LAMC2Q13753 1193 aa16.72■□□□□ 0.27
TNFRSF1A-203ENST00000437813 WTAPQ15007 396 aa16.72■□□□□ 0.27
TNFRSF1A-203ENST00000437813 PTGISQ16647 500 aa16.72■□□□□ 0.27
TNFRSF1A-203ENST00000437813 DGKDQ16760 1214 aa16.72■□□□□ 0.27
TNFRSF1A-203ENST00000437813 HSDL1Q3SXM5 330 aa16.72■□□□□ 0.27
TNFRSF1A-203ENST00000437813 CELF3Q5SZQ8 465 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1A-203ENST00000437813 CAGE1Q8TC20 777 aa16.72■□□□□ 0.27
TNFRSF1A-203ENST00000437813 GPKOWQ92917 476 aaPredicted RBP eCLIP16.72■□□□□ 0.27
TNFRSF1A-203ENST00000437813 WNT8BQ93098 351 aa16.72■□□□□ 0.27
TNFRSF1A-203ENST00000437813 MTA3Q9BTC8 594 aa16.72■□□□□ 0.27
TNFRSF1A-203ENST00000437813 LSG1Q9H089 658 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1A-203ENST00000437813 PRDM6Q9NQX0 595 aa16.72■□□□□ 0.27
TNFRSF1A-203ENST00000437813 MRVI1Q9Y6F6 885 aa16.72■□□□□ 0.27
TNFRSF1A-203ENST00000437813 RBAK-RBAKDNI3L0D1 243 aa16.71■□□□□ 0.27
TNFRSF1A-203ENST00000437813 ARHGEF15O94989 841 aa16.71■□□□□ 0.27
TNFRSF1A-203ENST00000437813 CXCL10P02778 98 aa16.71■□□□□ 0.27
TNFRSF1A-203ENST00000437813 TGFB3P10600 412 aa16.71■□□□□ 0.27
TNFRSF1A-203ENST00000437813 UBA1P22314 1058 aaKnown RBP16.71■□□□□ 0.27
TNFRSF1A-203ENST00000437813 MRPS9P82933 396 aaKnown RBP16.71■□□□□ 0.27
TNFRSF1A-203ENST00000437813 BFSP2Q13515 415 aa16.71■□□□□ 0.27
TNFRSF1A-203ENST00000437813 TCTN1Q2MV58 587 aa16.71■□□□□ 0.27
TNFRSF1A-203ENST00000437813 HOMER1Q86YM7 354 aa16.71■□□□□ 0.27
TNFRSF1A-203ENST00000437813 AFAP1L1Q8TED9 768 aa16.71■□□□□ 0.27
TNFRSF1A-203ENST00000437813 INPP4AQ96PE3 977 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms