RNA–Protein interactions for RNA: ENST00000431275.1

SPTLC3-202, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 2

Gene SPTLC3, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-202ENST00000431275 SCFD2Q8WU76 684 aa12.72□□□□□ -0.37
SPTLC3-202ENST00000431275 TMX3Q96JJ7 454 aa12.72□□□□□ -0.37
SPTLC3-202ENST00000431275 PGBD1Q96JS3 809 aa12.72□□□□□ -0.37
SPTLC3-202ENST00000431275 ALG1Q9BT22 464 aa12.72□□□□□ -0.37
SPTLC3-202ENST00000431275 EHMT1Q9H9B1 1298 aa12.72□□□□□ -0.37
SPTLC3-202ENST00000431275 GNEQ9Y223 722 aaKnown RBP12.72□□□□□ -0.37
SPTLC3-202ENST00000431275 DYNC1LI2O43237 492 aaPredicted RBP12.71□□□□□ -0.37
SPTLC3-202ENST00000431275 RGS20O76081 388 aa12.71□□□□□ -0.37
SPTLC3-202ENST00000431275 PGK1P00558 417 aa12.71□□□□□ -0.37
SPTLC3-202ENST00000431275 TXNP10599 105 aaKnown RBP12.71□□□□□ -0.37
SPTLC3-202ENST00000431275 XBP1P17861 261 aa12.71□□□□□ -0.37
SPTLC3-202ENST00000431275 MNX1P50219 401 aaPredicted RBP12.71□□□□□ -0.37
SPTLC3-202ENST00000431275 AP3B2Q13367 1082 aa12.71□□□□□ -0.37
SPTLC3-202ENST00000431275 TTLL4Q14679 1199 aa12.71□□□□□ -0.37
SPTLC3-202ENST00000431275 LRRC41Q15345 812 aa12.71□□□□□ -0.37
SPTLC3-202ENST00000431275 DUSP28Q4G0W2 176 aa12.71□□□□□ -0.37
SPTLC3-202ENST00000431275 GJC2Q5T442 439 aaPredicted RBP12.71□□□□□ -0.37
SPTLC3-202ENST00000431275 MCTP2Q6DN12 878 aa12.71□□□□□ -0.37
SPTLC3-202ENST00000431275 CCDC62Q6P9F0 684 aa12.71□□□□□ -0.37
SPTLC3-202ENST00000431275 REXO1Q8N1G1 1221 aaKnown RBP12.71□□□□□ -0.37
SPTLC3-202ENST00000431275 ANO3Q9BYT9 981 aa12.71□□□□□ -0.37
SPTLC3-202ENST00000431275 GJB4Q9NTQ9 266 aa12.71□□□□□ -0.37
SPTLC3-202ENST00000431275 RTEL1Q9NZ71 1219 aa12.71□□□□□ -0.37
SPTLC3-202ENST00000431275 PCDHA4Q9UN74 947 aa12.71□□□□□ -0.37
SPTLC3-202ENST00000431275 KCNJ14Q9UNX9 436 aa12.71□□□□□ -0.37
SPTLC3-202ENST00000431275 Q9Y3F1 56 aa12.71□□□□□ -0.37
SPTLC3-202ENST00000431275 MCM3APO60318 1980 aa12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 SYNRGQ9UMZ2 1314 aa12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 ADAMTS4O75173 837 aa12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 STAM2O75886 525 aa12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 FARP2O94887 1054 aaPredicted RBP12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 ARIH2O95376 493 aa12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 MYCNP04198 464 aaPredicted RBP12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 PTGS1P23219 599 aa12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 GJA9P57773 515 aa12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 IRX5P78411 483 aaPredicted RBP12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 NPY5RQ15761 445 aa12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 LY6KQ17RY6 165 aa12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 GALNT17Q6IS24 598 aa12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 UBE2Q1Q7Z7E8 422 aa12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 RNF180Q86T96 592 aa12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 BLIDQ8IZY5 108 aa12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 KLHDC9Q8NEP7 349 aa12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 RASGRP4Q8TDF6 673 aa12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 DIS3LQ8TF46 1054 aaKnown RBP12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 PAWRQ96IZ0 340 aaKnown RBP12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 PHF20Q9BVI0 1012 aa12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 AP5M1Q9H0R1 490 aa12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 UPF3AQ9H1J1 476 aaKnown RBP12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 SPC25Q9HBM1 224 aa12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 DDX41Q9UJV9 622 aaKnown RBP12.7□□□□□ -0.38
SPTLC3-202ENST00000431275 CENPFP49454 3210 aa12.69□□□□□ -0.38
SPTLC3-202ENST00000431275 LRRC37A2A6NM11 1700 aa12.69□□□□□ -0.38
SPTLC3-202ENST00000431275 M0R2N6 131 aa12.69□□□□□ -0.38
SPTLC3-202ENST00000431275 DNM1LO00429 736 aa12.69□□□□□ -0.38
SPTLC3-202ENST00000431275 NKRFO15226 690 aaKnown RBP eCLIP12.69□□□□□ -0.38
SPTLC3-202ENST00000431275 C6orf222P0C671 652 aaPredicted RBP12.69□□□□□ -0.38
SPTLC3-202ENST00000431275 SREBF1P36956 1147 aa12.69□□□□□ -0.38
SPTLC3-202ENST00000431275 NKX3-2P78367 333 aa12.69□□□□□ -0.38
SPTLC3-202ENST00000431275 HMGN5P82970 282 aaKnown RBP12.69□□□□□ -0.38
SPTLC3-202ENST00000431275 GNPTABQ3T906 1256 aa12.69□□□□□ -0.38
SPTLC3-202ENST00000431275 KCNV1Q6PIU1 500 aa12.69□□□□□ -0.38
SPTLC3-202ENST00000431275 NECAB2Q7Z6G3 386 aa12.69□□□□□ -0.38
SPTLC3-202ENST00000431275 TLK2Q86UE8 772 aa12.69□□□□□ -0.38
SPTLC3-202ENST00000431275 NLRX1Q86UT6 975 aa12.69□□□□□ -0.38
SPTLC3-202ENST00000431275 DAGLBQ8NCG7 672 aa12.69□□□□□ -0.38
SPTLC3-202ENST00000431275 COPS5Q92905 334 aa12.69□□□□□ -0.38
SPTLC3-202ENST00000431275 INPP4AQ96PE3 977 aaPredicted RBP12.69□□□□□ -0.38
SPTLC3-202ENST00000431275 UBIAD1Q9Y5Z9 338 aa12.69□□□□□ -0.38
SPTLC3-202ENST00000431275 MRVI1Q9Y6F6 885 aa12.69□□□□□ -0.38
SPTLC3-202ENST00000431275 MYADML2A6NDP7 307 aa12.68□□□□□ -0.38
SPTLC3-202ENST00000431275 SPATA31C2B4DYI2 1134 aa12.68□□□□□ -0.38
SPTLC3-202ENST00000431275 KBTBD13C9JR72 458 aa12.68□□□□□ -0.38
SPTLC3-202ENST00000431275 CTAGE5O15320 804 aa12.68□□□□□ -0.38
SPTLC3-202ENST00000431275 CYP3A4P08684 503 aa12.68□□□□□ -0.38
SPTLC3-202ENST00000431275 TGFB3P10600 412 aa12.68□□□□□ -0.38
SPTLC3-202ENST00000431275 ITGB5P18084 799 aa12.68□□□□□ -0.38
SPTLC3-202ENST00000431275 ICAM3P32942 547 aa12.68□□□□□ -0.38
SPTLC3-202ENST00000431275 FOSBP53539 338 aa12.68□□□□□ -0.38
SPTLC3-202ENST00000431275 ARHGAP4P98171 946 aa12.68□□□□□ -0.38
SPTLC3-202ENST00000431275 BEX3Q00994 111 aa12.68□□□□□ -0.38
SPTLC3-202ENST00000431275 SP2Q02086 613 aa12.68□□□□□ -0.38
SPTLC3-202ENST00000431275 KCNA10Q16322 511 aa12.68□□□□□ -0.38
SPTLC3-202ENST00000431275 GNASQ5JWF2 1037 aa12.68□□□□□ -0.38
SPTLC3-202ENST00000431275 CCSAPQ6IQ19 270 aaPredicted RBP12.68□□□□□ -0.38
SPTLC3-202ENST00000431275 FAM184AQ8NB25 1140 aa12.68□□□□□ -0.38
SPTLC3-202ENST00000431275 OR6J1Q8NGC5 347 aa12.68□□□□□ -0.38
SPTLC3-202ENST00000431275 CRYGNQ8WXF5 182 aa12.68□□□□□ -0.38
SPTLC3-202ENST00000431275 C11orf49Q9H6J7 331 aa12.68□□□□□ -0.38
SPTLC3-202ENST00000431275 FIBPO43427 364 aa12.67□□□□□ -0.38
SPTLC3-202ENST00000431275 GH1P01241 217 aa12.67□□□□□ -0.38
SPTLC3-202ENST00000431275 COL6A1P12109 1028 aa12.67□□□□□ -0.38
SPTLC3-202ENST00000431275 CST5P28325 142 aaPredicted RBP12.67□□□□□ -0.38
SPTLC3-202ENST00000431275 ZNF76P36508 570 aa12.67□□□□□ -0.38
SPTLC3-202ENST00000431275 SEMA3FQ13275 785 aa12.67□□□□□ -0.38
SPTLC3-202ENST00000431275 TRIM29Q14134 588 aa12.67□□□□□ -0.38
SPTLC3-202ENST00000431275 FSCN1Q16658 493 aaKnown RBP12.67□□□□□ -0.38
SPTLC3-202ENST00000431275 KRT40Q6A162 431 aa12.67□□□□□ -0.38
SPTLC3-202ENST00000431275 PCSK9Q8NBP7 692 aaKnown RBP12.67□□□□□ -0.38
SPTLC3-202ENST00000431275 CYP2W1Q8TAV3 490 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms