RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 AFG1LQ8WV93 481 aa17.92■□□□□ 0.46
CTDSP1-202ENST00000428361 COPS5Q92905 334 aa17.92■□□□□ 0.46
CTDSP1-202ENST00000428361 LZTS2Q9BRK4 669 aa17.92■□□□□ 0.46
CTDSP1-202ENST00000428361 TRMT13Q9NUP7 481 aaKnown RBP17.92■□□□□ 0.46
CTDSP1-202ENST00000428361 PARNO95453 639 aaKnown RBP17.91■□□□□ 0.46
CTDSP1-202ENST00000428361 TGFB3P10600 412 aa17.91■□□□□ 0.46
CTDSP1-202ENST00000428361 CCND2P30279 289 aa17.91■□□□□ 0.46
CTDSP1-202ENST00000428361 ARHGAP1Q07960 439 aa17.91■□□□□ 0.46
CTDSP1-202ENST00000428361 LY6KQ17RY6 165 aa17.91■□□□□ 0.46
CTDSP1-202ENST00000428361 CAGE1Q8TC20 777 aa17.91■□□□□ 0.46
CTDSP1-202ENST00000428361 MYLIPQ8WY64 445 aa17.91■□□□□ 0.46
CTDSP1-202ENST00000428361 TMEM87BQ96K49 555 aa17.91■□□□□ 0.46
CTDSP1-202ENST00000428361 GAS2L1Q99501 681 aaPredicted RBP17.91■□□□□ 0.46
CTDSP1-202ENST00000428361 PDCD2LQ9BRP1 358 aa17.91■□□□□ 0.46
CTDSP1-202ENST00000428361 WNT8AQ9H1J5 351 aa17.91■□□□□ 0.46
CTDSP1-202ENST00000428361 DDX41Q9UJV9 622 aaKnown RBP17.91■□□□□ 0.46
CTDSP1-202ENST00000428361 SLC4A7Q9Y6M7 1214 aa17.91■□□□□ 0.46
CTDSP1-202ENST00000428361 UMODL1Q5DID0 1318 aa17.91■□□□□ 0.46
CTDSP1-202ENST00000428361 KIAA1217Q5T5P2 1943 aa17.9■□□□□ 0.46
CTDSP1-202ENST00000428361 STAM2O75886 525 aa17.9■□□□□ 0.46
CTDSP1-202ENST00000428361 CALM1P0DP23 149 aa17.9■□□□□ 0.46
CTDSP1-202ENST00000428361 CALM2P0DP24 149 aa17.9■□□□□ 0.46
CTDSP1-202ENST00000428361 CALM3P0DP25 149 aa17.9■□□□□ 0.46
CTDSP1-202ENST00000428361 CYP2C9P11712 490 aa17.9■□□□□ 0.46
CTDSP1-202ENST00000428361 SMARCA1P28370 1054 aa17.9■□□□□ 0.46
CTDSP1-202ENST00000428361 MCM5P33992 734 aa17.9■□□□□ 0.46
CTDSP1-202ENST00000428361 GNPTABQ3T906 1256 aa17.9■□□□□ 0.46
CTDSP1-202ENST00000428361 CHST3Q7LGC8 479 aa17.9■□□□□ 0.46
CTDSP1-202ENST00000428361 OTOP2Q7RTS6 562 aa17.9■□□□□ 0.46
CTDSP1-202ENST00000428361 DHX37Q8IY37 1157 aaKnown RBP17.9■□□□□ 0.46
CTDSP1-202ENST00000428361 MB21D2Q8IYB1 491 aaPredicted RBP17.9■□□□□ 0.46
CTDSP1-202ENST00000428361 PPTC7Q8NI37 304 aa17.9■□□□□ 0.46
CTDSP1-202ENST00000428361 PIGSQ96S52 555 aa17.9■□□□□ 0.46
CTDSP1-202ENST00000428361 PBX4Q9BYU1 374 aa17.9■□□□□ 0.46
CTDSP1-202ENST00000428361 SEC63Q9UGP8 760 aaKnown RBP17.9■□□□□ 0.46
CTDSP1-202ENST00000428361 ZBBXA8MT70 800 aa17.89■□□□□ 0.45
CTDSP1-202ENST00000428361 MYCLP12524 364 aaPredicted RBP17.89■□□□□ 0.45
CTDSP1-202ENST00000428361 RNF20Q5VTR2 975 aa17.89■□□□□ 0.45
CTDSP1-202ENST00000428361 VSIG10LQ86VR7 867 aa17.89■□□□□ 0.45
CTDSP1-202ENST00000428361 C7orf31Q8N865 590 aa17.89■□□□□ 0.45
CTDSP1-202ENST00000428361 IGDCC4Q8TDY8 1250 aa17.89■□□□□ 0.45
CTDSP1-202ENST00000428361 CUL5Q93034 780 aa17.89■□□□□ 0.45
CTDSP1-202ENST00000428361 RRP36Q96EU6 259 aaKnown RBP17.89■□□□□ 0.45
CTDSP1-202ENST00000428361 SPZ1Q9BXG8 430 aa17.89■□□□□ 0.45
CTDSP1-202ENST00000428361 SLC28A3Q9HAS3 691 aa17.89■□□□□ 0.45
CTDSP1-202ENST00000428361 CCDC69A6NI79 296 aa17.88■□□□□ 0.45
CTDSP1-202ENST00000428361 OPLAHO14841 1288 aa17.88■□□□□ 0.45
CTDSP1-202ENST00000428361 PPP1R11O60927 126 aaPredicted RBP17.88■□□□□ 0.45
CTDSP1-202ENST00000428361 CHMP4BP1P59074 171 aa17.88■□□□□ 0.45
CTDSP1-202ENST00000428361 PGM5Q15124 567 aa17.88■□□□□ 0.45
CTDSP1-202ENST00000428361 PTGISQ16647 500 aa17.88■□□□□ 0.45
CTDSP1-202ENST00000428361 NFXL1Q6ZNB6 911 aa17.88■□□□□ 0.45
CTDSP1-202ENST00000428361 ZNF654Q8IZM8 581 aa17.88■□□□□ 0.45
CTDSP1-202ENST00000428361 AFAP1L1Q8TED9 768 aa17.88■□□□□ 0.45
CTDSP1-202ENST00000428361 SCLYQ96I15 445 aa17.88■□□□□ 0.45
CTDSP1-202ENST00000428361 PRC1O43663 620 aa17.87■□□□□ 0.45
CTDSP1-202ENST00000428361 PPFIA4O75335 1185 aa17.87■□□□□ 0.45
CTDSP1-202ENST00000428361 HOXA13P31271 388 aaPredicted RBP17.87■□□□□ 0.45
CTDSP1-202ENST00000428361 GRIN2CQ14957 1233 aa17.87■□□□□ 0.45
CTDSP1-202ENST00000428361 CENPQQ7L2Z9 268 aaPredicted RBP17.87■□□□□ 0.45
CTDSP1-202ENST00000428361 FCHSD1Q86WN1 690 aa17.87■□□□□ 0.45
CTDSP1-202ENST00000428361 SLC9A7Q96T83 725 aa17.87■□□□□ 0.45
CTDSP1-202ENST00000428361 ESYT1Q9BSJ8 1104 aa17.87■□□□□ 0.45
CTDSP1-202ENST00000428361 LY9Q9HBG7 655 aa17.87■□□□□ 0.45
CTDSP1-202ENST00000428361 PCDHA11Q9Y5I1 949 aa17.87■□□□□ 0.45
CTDSP1-202ENST00000428361 CYTH3O43739 400 aa17.86■□□□□ 0.45
CTDSP1-202ENST00000428361 BAIAP3O94812 1187 aa17.86■□□□□ 0.45
CTDSP1-202ENST00000428361 F2P00734 622 aa17.86■□□□□ 0.45
CTDSP1-202ENST00000428361 IQCF3P0C7M6 154 aa17.86■□□□□ 0.45
CTDSP1-202ENST00000428361 ATP2A2P16615 1042 aaKnown RBP17.86■□□□□ 0.45
CTDSP1-202ENST00000428361 LIFRP42702 1097 aa17.86■□□□□ 0.45
CTDSP1-202ENST00000428361 ANTXR2P58335 489 aa17.86■□□□□ 0.45
CTDSP1-202ENST00000428361 BMP2KLQ5H9B9 411 aa17.86■□□□□ 0.45
CTDSP1-202ENST00000428361 CELF3Q5SZQ8 465 aaKnown RBP17.86■□□□□ 0.45
CTDSP1-202ENST00000428361 XRRA1Q6P2D8 792 aa17.86■□□□□ 0.45
CTDSP1-202ENST00000428361 DEFB128Q7Z7B8 93 aa17.86■□□□□ 0.45
CTDSP1-202ENST00000428361 PHOSPHO2Q8TCD6 241 aa17.86■□□□□ 0.45
CTDSP1-202ENST00000428361 SPATA33Q96N06 139 aa17.86■□□□□ 0.45
CTDSP1-202ENST00000428361 FTOQ9C0B1 505 aaKnown RBP eCLIP17.86■□□□□ 0.45
CTDSP1-202ENST00000428361 MLXIPQ9HAP2 919 aa17.86■□□□□ 0.45
CTDSP1-202ENST00000428361 ANO2Q9NQ90 1003 aa17.86■□□□□ 0.45
CTDSP1-202ENST00000428361 CXXC1Q9P0U4 656 aaPredicted RBP17.86■□□□□ 0.45
CTDSP1-202ENST00000428361 GTF2IRD1Q9UHL9 959 aa17.86■□□□□ 0.45
CTDSP1-202ENST00000428361 GRXCR1A8MXD5 290 aa17.85■□□□□ 0.45
CTDSP1-202ENST00000428361 GGPS1O95749 300 aa17.85■□□□□ 0.45
CTDSP1-202ENST00000428361 HOXD8P13378 290 aaPredicted RBP17.85■□□□□ 0.45
CTDSP1-202ENST00000428361 PSEN2P49810 448 aa17.85■□□□□ 0.45
CTDSP1-202ENST00000428361 RBL2Q08999 1139 aa17.85■□□□□ 0.45
CTDSP1-202ENST00000428361 NEDD9Q14511 834 aa17.85■□□□□ 0.45
CTDSP1-202ENST00000428361 MFSD10Q14728 455 aa17.85■□□□□ 0.45
CTDSP1-202ENST00000428361 MYSM1Q5VVJ2 828 aa17.85■□□□□ 0.45
CTDSP1-202ENST00000428361 SYNE3Q6ZMZ3 975 aa17.85■□□□□ 0.45
CTDSP1-202ENST00000428361 SMARCC2Q8TAQ2 1214 aa17.85■□□□□ 0.45
CTDSP1-202ENST00000428361 LSG1Q9H089 658 aaKnown RBP17.85■□□□□ 0.45
CTDSP1-202ENST00000428361 SLC12A7Q9Y666 1083 aa17.85■□□□□ 0.45
CTDSP1-202ENST00000428361 BAZ2BQ9UIF8 2168 aaKnown RBP17.84■□□□□ 0.45
CTDSP1-202ENST00000428361 TANC1Q9C0D5 1861 aa17.84■□□□□ 0.45
CTDSP1-202ENST00000428361 FRMPD4Q14CM0 1322 aa17.84■□□□□ 0.45
CTDSP1-202ENST00000428361 KIF28PB7ZC32 967 aa17.84■□□□□ 0.45
CTDSP1-202ENST00000428361 NOP56O00567 594 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms