RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 SYAP1Q96A49 352 aaPredicted RBP11.7□□□□□ -0.54
MDC1-205ENST00000425072 PGBD1Q96JS3 809 aa11.7□□□□□ -0.54
MDC1-205ENST00000425072 AK8Q96MA6 479 aa11.7□□□□□ -0.54
MDC1-205ENST00000425072 FAM20AQ96MK3 541 aa11.7□□□□□ -0.54
MDC1-205ENST00000425072 MBOAT7Q96N66 472 aa11.7□□□□□ -0.54
MDC1-205ENST00000425072 PYM1Q9BRP8 204 aaKnown RBP11.7□□□□□ -0.54
MDC1-205ENST00000425072 FTOQ9C0B1 505 aaKnown RBP eCLIP11.7□□□□□ -0.54
MDC1-205ENST00000425072 A1CFQ9NQ94 594 aaKnown RBP11.7□□□□□ -0.54
MDC1-205ENST00000425072 SLC5A4Q9NY91 659 aa11.7□□□□□ -0.54
MDC1-205ENST00000425072 PCDHA12Q9UN75 941 aa11.7□□□□□ -0.54
MDC1-205ENST00000425072 STK24Q9Y6E0 443 aa11.7□□□□□ -0.54
MDC1-205ENST00000425072 IVNS1ABPQ9Y6Y0 642 aa11.7□□□□□ -0.54
MDC1-205ENST00000425072 MYH7BA7E2Y1 1941 aa11.7□□□□□ -0.54
MDC1-205ENST00000425072 ZNFX1Q9P2E3 1918 aaKnown RBP11.7□□□□□ -0.54
MDC1-205ENST00000425072 CA12O43570 354 aa11.69□□□□□ -0.54
MDC1-205ENST00000425072 TLR2O60603 784 aa11.69□□□□□ -0.54
MDC1-205ENST00000425072 GADD45BO75293 160 aaPredicted RBP11.69□□□□□ -0.54
MDC1-205ENST00000425072 LETM1O95202 739 aaPredicted RBP11.69□□□□□ -0.54
MDC1-205ENST00000425072 OR52Z1P0C646 297 aa11.69□□□□□ -0.54
MDC1-205ENST00000425072 NBR1Q14596 966 aa11.69□□□□□ -0.54
MDC1-205ENST00000425072 CEP55Q53EZ4 464 aa11.69□□□□□ -0.54
MDC1-205ENST00000425072 AXDND1Q5T1B0 1012 aaPredicted RBP11.69□□□□□ -0.54
MDC1-205ENST00000425072 WDR78Q5VTH9 848 aa11.69□□□□□ -0.54
MDC1-205ENST00000425072 CYP4F22Q6NT55 531 aa11.69□□□□□ -0.54
MDC1-205ENST00000425072 CCDC73Q6ZRK6 1079 aa11.69□□□□□ -0.54
MDC1-205ENST00000425072 VSIG10LQ86VR7 867 aa11.69□□□□□ -0.54
MDC1-205ENST00000425072 MRPS27Q92552 414 aaKnown RBP11.69□□□□□ -0.54
MDC1-205ENST00000425072 CCDC34Q96HJ3 373 aa11.69□□□□□ -0.54
MDC1-205ENST00000425072 CAPNS2Q96L46 248 aa11.69□□□□□ -0.54
MDC1-205ENST00000425072 MTMR9Q96QG7 549 aa11.69□□□□□ -0.54
MDC1-205ENST00000425072 MMP19Q99542 508 aa11.69□□□□□ -0.54
MDC1-205ENST00000425072 TXNRD2Q9NNW7 524 aa11.69□□□□□ -0.54
MDC1-205ENST00000425072 PRDM10Q9NQV6 1147 aa11.69□□□□□ -0.54
MDC1-205ENST00000425072 PXMP2Q9NR77 195 aa11.69□□□□□ -0.54
MDC1-205ENST00000425072 FBXO2Q9UK22 296 aaPredicted RBP11.69□□□□□ -0.54
MDC1-205ENST00000425072 TNRC18O15417 2968 aaPredicted RBP11.68□□□□□ -0.54
MDC1-205ENST00000425072 RPTORQ8N122 1335 aa11.68□□□□□ -0.54
MDC1-205ENST00000425072 IGF2BP3O00425 579 aaKnown RBP eCLIP11.68□□□□□ -0.54
MDC1-205ENST00000425072 MEIS1O00470 390 aa11.68□□□□□ -0.54
MDC1-205ENST00000425072 EIF3JO75822 258 aaKnown RBP11.68□□□□□ -0.54
MDC1-205ENST00000425072 NR3C2P08235 984 aa11.68□□□□□ -0.54
MDC1-205ENST00000425072 BCRP11274 1271 aa11.68□□□□□ -0.54
MDC1-205ENST00000425072 TAL1P17542 331 aaPredicted RBP11.68□□□□□ -0.54
MDC1-205ENST00000425072 CCND2P30279 289 aa11.68□□□□□ -0.54
MDC1-205ENST00000425072 TXLNAP40222 546 aa11.68□□□□□ -0.54
MDC1-205ENST00000425072 TXKP42681 527 aa11.68□□□□□ -0.54
MDC1-205ENST00000425072 SETQ01105 290 aaPredicted RBP11.68□□□□□ -0.54
MDC1-205ENST00000425072 GRM1Q13255 1194 aa11.68□□□□□ -0.54
MDC1-205ENST00000425072 STXBP2Q15833 593 aa11.68□□□□□ -0.54
MDC1-205ENST00000425072 PRR16Q569H4 304 aa11.68□□□□□ -0.54
MDC1-205ENST00000425072 C17orf99Q6UX52 265 aa11.68□□□□□ -0.54
MDC1-205ENST00000425072 NLRX1Q86UT6 975 aa11.68□□□□□ -0.54
MDC1-205ENST00000425072 CDHR1Q96JP9 859 aa11.68□□□□□ -0.54
MDC1-205ENST00000425072 MXRA8Q9BRK3 442 aa11.68□□□□□ -0.54
MDC1-205ENST00000425072 PDCD2LQ9BRP1 358 aa11.68□□□□□ -0.54
MDC1-205ENST00000425072 VWA3AA6NCI4 1184 aa11.67□□□□□ -0.54
MDC1-205ENST00000425072 ASB14A6NK59 587 aa11.67□□□□□ -0.54
MDC1-205ENST00000425072 SLC26A4O43511 780 aa11.67□□□□□ -0.54
MDC1-205ENST00000425072 EDIL3O43854 480 aa11.67□□□□□ -0.54
MDC1-205ENST00000425072 TDP2O95551 362 aa11.67□□□□□ -0.54
MDC1-205ENST00000425072 MYCLP12524 364 aaPredicted RBP11.67□□□□□ -0.54
MDC1-205ENST00000425072 UBA7P41226 1012 aa11.67□□□□□ -0.54
MDC1-205ENST00000425072 TECP42680 631 aa11.67□□□□□ -0.54
MDC1-205ENST00000425072 FXR2P51116 673 aaKnown RBP eCLIP11.67□□□□□ -0.54
MDC1-205ENST00000425072 PGM5Q15124 567 aa11.67□□□□□ -0.54
MDC1-205ENST00000425072 RESP18Q5W5W9 173 aa11.67□□□□□ -0.54
MDC1-205ENST00000425072 KANK3Q6NY19 840 aa11.67□□□□□ -0.54
MDC1-205ENST00000425072 PLEKHH3Q7Z736 793 aa11.67□□□□□ -0.54
MDC1-205ENST00000425072 PLA2G4DQ86XP0 818 aa11.67□□□□□ -0.54
MDC1-205ENST00000425072 FAM133AQ8N9E0 248 aa11.67□□□□□ -0.54
MDC1-205ENST00000425072 FSIP1Q8NA03 581 aa11.67□□□□□ -0.54
MDC1-205ENST00000425072 ABHD8Q96I13 439 aa11.67□□□□□ -0.54
MDC1-205ENST00000425072 CLIC6Q96NY7 704 aa11.67□□□□□ -0.54
MDC1-205ENST00000425072 TTC12Q9H892 705 aaPredicted RBP11.67□□□□□ -0.54
MDC1-205ENST00000425072 JADE2Q9NQC1 790 aa11.67□□□□□ -0.54
MDC1-205ENST00000425072 COL20A1Q9P218 1284 aa11.67□□□□□ -0.54
MDC1-205ENST00000425072 CCDC39Q9UFE4 941 aa11.67□□□□□ -0.54
MDC1-205ENST00000425072 USP25Q9UHP3 1055 aa11.67□□□□□ -0.54
MDC1-205ENST00000425072 DIS3Q9Y2L1 958 aaKnown RBP11.67□□□□□ -0.54
MDC1-205ENST00000425072 FRMPD4Q14CM0 1322 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 FAM237AA0A1B0GTK4 181 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 SLC15A5A6NIM6 579 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 FAM86B1E9PN63 330 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 WNT7AO00755 349 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 CTAGE5O15320 804 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 FAM86B2P0C5J1 330 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 EIF2AK2P19525 551 aaKnown RBP11.66□□□□□ -0.54
MDC1-205ENST00000425072 FAM160A1Q05DH4 1040 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 GNPTABQ3T906 1256 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 TPRNQ4KMQ1 711 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 KCNV1Q6PIU1 500 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 SLC30A10Q6XR72 485 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 DPP9Q86TI2 863 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 GPT2Q8TD30 523 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 TIGD1Q96MW7 591 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 RIT2Q99578 217 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 CCSER1Q9C0I3 900 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 CSRNP2Q9H175 543 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 TMEM60Q9H2L4 133 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 EFCC1Q9HA90 598 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms