RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 AFG1LQ8WV93 481 aa18.78■□□□□ 0.6
DDR1-234ENST00000424544 TIFAQ96CG3 184 aa18.78■□□□□ 0.6
DDR1-234ENST00000424544 PDCD2LQ9BRP1 358 aa18.78■□□□□ 0.6
DDR1-234ENST00000424544 PCDHA1Q9Y5I3 950 aa18.78■□□□□ 0.6
DDR1-234ENST00000424544 KIAA1217Q5T5P2 1943 aa18.78■□□□□ 0.6
DDR1-234ENST00000424544 MYO9BQ13459 2157 aa18.78■□□□□ 0.6
DDR1-234ENST00000424544 CHD7Q9P2D1 2997 aa18.78■□□□□ 0.6
DDR1-234ENST00000424544 GH1P01241 217 aa18.77■□□□□ 0.6
DDR1-234ENST00000424544 MMP3P08254 477 aa18.77■□□□□ 0.6
DDR1-234ENST00000424544 HOXD8P13378 290 aaPredicted RBP18.77■□□□□ 0.6
DDR1-234ENST00000424544 ARHGEF16Q5VV41 709 aa18.77■□□□□ 0.6
DDR1-234ENST00000424544 CHST3Q7LGC8 479 aa18.77■□□□□ 0.6
DDR1-234ENST00000424544 SCLYQ96I15 445 aa18.77■□□□□ 0.6
DDR1-234ENST00000424544 PIGSQ96S52 555 aa18.77■□□□□ 0.6
DDR1-234ENST00000424544 MAP3K14Q99558 947 aa18.77■□□□□ 0.6
DDR1-234ENST00000424544 MTA3Q9BTC8 594 aa18.77■□□□□ 0.6
DDR1-234ENST00000424544 PITPNM1O00562 1244 aa18.76■□□□□ 0.59
DDR1-234ENST00000424544 EIF2AK2P19525 551 aaKnown RBP18.76■□□□□ 0.59
DDR1-234ENST00000424544 OTOP2Q7RTS6 562 aa18.76■□□□□ 0.59
DDR1-234ENST00000424544 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.76■□□□□ 0.59
DDR1-234ENST00000424544 LSG1Q9H089 658 aaKnown RBP18.76■□□□□ 0.59
DDR1-234ENST00000424544 RBM8AQ9Y5S9 174 aaKnown RBP18.76■□□□□ 0.59
DDR1-234ENST00000424544 PNMA6FA0A0J9YX94 578 aa18.75■□□□□ 0.59
DDR1-234ENST00000424544 SMARCA1P28370 1054 aa18.75■□□□□ 0.59
DDR1-234ENST00000424544 TRAF1Q13077 416 aa18.75■□□□□ 0.59
DDR1-234ENST00000424544 COL9A3Q14050 684 aaPredicted RBP18.75■□□□□ 0.59
DDR1-234ENST00000424544 WTAPQ15007 396 aa18.75■□□□□ 0.59
DDR1-234ENST00000424544 RALYLQ86SE5 291 aaKnown RBP18.75■□□□□ 0.59
DDR1-234ENST00000424544 MAFAQ8NHW3 353 aaPredicted RBP18.75■□□□□ 0.59
DDR1-234ENST00000424544 PPP1R13LQ8WUF5 828 aa18.75■□□□□ 0.59
DDR1-234ENST00000424544 ERICH2A1L162 156 aa18.74■□□□□ 0.59
DDR1-234ENST00000424544 HAS3O00219 553 aa18.74■□□□□ 0.59
DDR1-234ENST00000424544 PFKMP08237 780 aa18.74■□□□□ 0.59
DDR1-234ENST00000424544 IQCF3P0C7M6 154 aa18.74■□□□□ 0.59
DDR1-234ENST00000424544 CASTP20810 708 aaKnown RBP18.74■□□□□ 0.59
DDR1-234ENST00000424544 SP2Q02086 613 aa18.74■□□□□ 0.59
DDR1-234ENST00000424544 LAMC2Q13753 1193 aa18.74■□□□□ 0.59
DDR1-234ENST00000424544 GPNMBQ14956 572 aa18.74■□□□□ 0.59
DDR1-234ENST00000424544 PGM5Q15124 567 aa18.74■□□□□ 0.59
DDR1-234ENST00000424544 NECTIN1Q15223 517 aa18.74■□□□□ 0.59
DDR1-234ENST00000424544 TMEM67Q5HYA8 995 aa18.74■□□□□ 0.59
DDR1-234ENST00000424544 MYSM1Q5VVJ2 828 aa18.74■□□□□ 0.59
DDR1-234ENST00000424544 MTIF3Q9H2K0 278 aaKnown RBP18.74■□□□□ 0.59
DDR1-234ENST00000424544 LY9Q9HBG7 655 aa18.74■□□□□ 0.59
DDR1-234ENST00000424544 MUC3AQ02505 3323 aa18.74■□□□□ 0.59
DDR1-234ENST00000424544 PPFIA4O75335 1185 aa18.73■□□□□ 0.59
DDR1-234ENST00000424544 TGFB3P10600 412 aa18.73■□□□□ 0.59
DDR1-234ENST00000424544 FOSL2P15408 326 aa18.73■□□□□ 0.59
DDR1-234ENST00000424544 HOXA13P31271 388 aaPredicted RBP18.73■□□□□ 0.59
DDR1-234ENST00000424544 RFC2P35250 354 aa18.73■□□□□ 0.59
DDR1-234ENST00000424544 SART3Q15020 963 aaKnown RBP18.73■□□□□ 0.59
DDR1-234ENST00000424544 RAB30Q15771 203 aa18.73■□□□□ 0.59
DDR1-234ENST00000424544 DGKDQ16760 1214 aa18.73■□□□□ 0.59
DDR1-234ENST00000424544 KCNV1Q6PIU1 500 aa18.73■□□□□ 0.59
DDR1-234ENST00000424544 IL31RAQ8NI17 732 aa18.73■□□□□ 0.59
DDR1-234ENST00000424544 PPTC7Q8NI37 304 aa18.73■□□□□ 0.59
DDR1-234ENST00000424544 YBX2Q9Y2T7 364 aaKnown RBP18.73■□□□□ 0.59
DDR1-234ENST00000424544 GCOM1H8Y6P7 765 aaPredicted RBP18.72■□□□□ 0.59
DDR1-234ENST00000424544 CDC45O75419 566 aa18.72■□□□□ 0.59
DDR1-234ENST00000424544 POLR2MP0CAP2 368 aa18.72■□□□□ 0.59
DDR1-234ENST00000424544 RBL2Q08999 1139 aa18.72■□□□□ 0.59
DDR1-234ENST00000424544 PTGISQ16647 500 aa18.72■□□□□ 0.59
DDR1-234ENST00000424544 FAM47CQ5HY64 1035 aa18.72■□□□□ 0.59
DDR1-234ENST00000424544 GDF6Q6KF10 455 aaPredicted RBP18.72■□□□□ 0.59
DDR1-234ENST00000424544 CATIPQ7Z7H3 387 aa18.72■□□□□ 0.59
DDR1-234ENST00000424544 HOMER1Q86YM7 354 aa18.72■□□□□ 0.59
DDR1-234ENST00000424544 TET1Q8NFU7 2136 aa18.72■□□□□ 0.59
DDR1-234ENST00000424544 SPZ1Q9BXG8 430 aa18.72■□□□□ 0.59
DDR1-234ENST00000424544 COL25A1Q9BXS0 654 aaPredicted RBP18.72■□□□□ 0.59
DDR1-234ENST00000424544 MRVI1Q9Y6F6 885 aa18.72■□□□□ 0.59
DDR1-234ENST00000424544 SLC4A7Q9Y6M7 1214 aa18.72■□□□□ 0.59
DDR1-234ENST00000424544 FRMPD4Q14CM0 1322 aa18.72■□□□□ 0.59
DDR1-234ENST00000424544 F2P00734 622 aa18.71■□□□□ 0.59
DDR1-234ENST00000424544 MRPS9P82933 396 aaKnown RBP18.71■□□□□ 0.59
DDR1-234ENST00000424544 BFSP2Q13515 415 aa18.71■□□□□ 0.59
DDR1-234ENST00000424544 CELF3Q5SZQ8 465 aaKnown RBP18.71■□□□□ 0.59
DDR1-234ENST00000424544 TMTC2Q8N394 836 aa18.71■□□□□ 0.59
DDR1-234ENST00000424544 ESYT1Q9BSJ8 1104 aa18.71■□□□□ 0.59
DDR1-234ENST00000424544 GTF2IRD1Q9UHL9 959 aa18.71■□□□□ 0.59
DDR1-234ENST00000424544 MSRAQ9UJ68 235 aa18.71■□□□□ 0.59
DDR1-234ENST00000424544 TRIP12Q14669 1992 aaPredicted RBP18.71■□□□□ 0.59
DDR1-234ENST00000424544 SCN5AQ14524 2016 aa18.71■□□□□ 0.59
DDR1-234ENST00000424544 SLC27A2O14975 620 aa18.7■□□□□ 0.58
DDR1-234ENST00000424544 DDAH1O94760 285 aa18.7■□□□□ 0.58
DDR1-234ENST00000424544 MYCLP12524 364 aaPredicted RBP18.7■□□□□ 0.58
DDR1-234ENST00000424544 HSDL1Q3SXM5 330 aa18.7■□□□□ 0.58
DDR1-234ENST00000424544 CASC1Q6TDU7 716 aa18.7■□□□□ 0.58
DDR1-234ENST00000424544 DHX37Q8IY37 1157 aaKnown RBP18.7■□□□□ 0.58
DDR1-234ENST00000424544 ZNF654Q8IZM8 581 aa18.7■□□□□ 0.58
DDR1-234ENST00000424544 CAGE1Q8TC20 777 aa18.7■□□□□ 0.58
DDR1-234ENST00000424544 DHX38Q92620 1227 aaKnown RBP18.7■□□□□ 0.58
DDR1-234ENST00000424544 HDAC6Q9UBN7 1215 aa18.7■□□□□ 0.58
DDR1-234ENST00000424544 MYH7BA7E2Y1 1941 aa18.7■□□□□ 0.58
DDR1-234ENST00000424544 ICAM3P32942 547 aa18.69■□□□□ 0.58
DDR1-234ENST00000424544 MCM5P33992 734 aa18.69■□□□□ 0.58
DDR1-234ENST00000424544 LIFRP42702 1097 aa18.69■□□□□ 0.58
DDR1-234ENST00000424544 PSEN2P49810 448 aa18.69■□□□□ 0.58
DDR1-234ENST00000424544 ADGRE1Q14246 886 aa18.69■□□□□ 0.58
DDR1-234ENST00000424544 DEFB128Q7Z7B8 93 aa18.69■□□□□ 0.58
DDR1-234ENST00000424544 RETREG2Q8NC44 543 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms