RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 PCNX4Q63HM2 1172 aa21.18■□□□□ 0.98
HDAC6-205ENST00000423941 ARRDC4Q8NCT1 418 aa21.18■□□□□ 0.98
HDAC6-205ENST00000423941 SCFD2Q8WU76 684 aa21.18■□□□□ 0.98
HDAC6-205ENST00000423941 CRYGNQ8WXF5 182 aa21.18■□□□□ 0.98
HDAC6-205ENST00000423941 AIFM3Q96NN9 605 aa21.18■□□□□ 0.98
HDAC6-205ENST00000423941 WDR11Q9BZH6 1224 aa21.18■□□□□ 0.98
HDAC6-205ENST00000423941 C6orf50Q9HD87 102 aa21.18■□□□□ 0.98
HDAC6-205ENST00000423941 XPNPEP3Q9NQH7 507 aa21.18■□□□□ 0.98
HDAC6-205ENST00000423941 VPS54Q9P1Q0 977 aa21.18■□□□□ 0.98
HDAC6-205ENST00000423941 DNM1LO00429 736 aa21.17■□□□□ 0.98
HDAC6-205ENST00000423941 CST5P28325 142 aaPredicted RBP21.17■□□□□ 0.98
HDAC6-205ENST00000423941 GNA11P29992 359 aa21.17■□□□□ 0.98
HDAC6-205ENST00000423941 CCND2P30279 289 aa21.17■□□□□ 0.98
HDAC6-205ENST00000423941 AP3B2Q13367 1082 aa21.17■□□□□ 0.98
HDAC6-205ENST00000423941 LRRC41Q15345 812 aa21.17■□□□□ 0.98
HDAC6-205ENST00000423941 MCTP2Q6DN12 878 aa21.17■□□□□ 0.98
HDAC6-205ENST00000423941 CCDC148Q8NFR7 591 aa21.17■□□□□ 0.98
HDAC6-205ENST00000423941 LENG1Q96BZ8 264 aaPredicted RBP21.17■□□□□ 0.98
HDAC6-205ENST00000423941 INPP4AQ96PE3 977 aaPredicted RBP21.17■□□□□ 0.98
HDAC6-205ENST00000423941 LLPHQ9BRT6 129 aaKnown RBP21.17■□□□□ 0.98
HDAC6-205ENST00000423941 ORC3Q9UBD5 711 aaPredicted RBP21.17■□□□□ 0.98
HDAC6-205ENST00000423941 SYNRGQ9UMZ2 1314 aa21.17■□□□□ 0.98
HDAC6-205ENST00000423941 DNAH12Q6ZR08 3092 aa21.16■□□□□ 0.98
HDAC6-205ENST00000423941 M0R2N6 131 aa21.16■□□□□ 0.98
HDAC6-205ENST00000423941 NKRFO15226 690 aaKnown RBP eCLIP21.16■□□□□ 0.98
HDAC6-205ENST00000423941 FARP2O94887 1054 aaPredicted RBP21.16■□□□□ 0.98
HDAC6-205ENST00000423941 ARIH2O95376 493 aa21.16■□□□□ 0.98
HDAC6-205ENST00000423941 PGK1P00558 417 aa21.16■□□□□ 0.98
HDAC6-205ENST00000423941 MCM2P49736 904 aa21.16■□□□□ 0.98
HDAC6-205ENST00000423941 DAGLBQ8NCG7 672 aa21.16■□□□□ 0.98
HDAC6-205ENST00000423941 SPDYE3A6NKU9 549 aa21.15■□□□□ 0.98
HDAC6-205ENST00000423941 DTNBO60941 627 aa21.15■□□□□ 0.98
HDAC6-205ENST00000423941 TGFB3P10600 412 aa21.15■□□□□ 0.98
HDAC6-205ENST00000423941 MYCLP12524 364 aaPredicted RBP21.15■□□□□ 0.98
HDAC6-205ENST00000423941 ICAM3P32942 547 aa21.15■□□□□ 0.98
HDAC6-205ENST00000423941 GALNT17Q6IS24 598 aa21.15■□□□□ 0.98
HDAC6-205ENST00000423941 DIS3LQ8TF46 1054 aaKnown RBP21.15■□□□□ 0.98
HDAC6-205ENST00000423941 PAWRQ96IZ0 340 aaKnown RBP21.15■□□□□ 0.98
HDAC6-205ENST00000423941 TSEN34Q9BSV6 310 aaKnown RBP21.15■□□□□ 0.98
HDAC6-205ENST00000423941 PHF20Q9BVI0 1012 aa21.15■□□□□ 0.98
HDAC6-205ENST00000423941 TMEM260Q9NX78 707 aa21.15■□□□□ 0.98
HDAC6-205ENST00000423941 DDX41Q9UJV9 622 aaKnown RBP21.15■□□□□ 0.98
HDAC6-205ENST00000423941 MYH7BA7E2Y1 1941 aa21.15■□□□□ 0.98
HDAC6-205ENST00000423941 JAK2O60674 1132 aa21.14■□□□□ 0.97
HDAC6-205ENST00000423941 SREBF1P36956 1147 aa21.14■□□□□ 0.97
HDAC6-205ENST00000423941 TTLL4Q14679 1199 aa21.14■□□□□ 0.97
HDAC6-205ENST00000423941 KCNV1Q6PIU1 500 aa21.14■□□□□ 0.97
HDAC6-205ENST00000423941 NECAB2Q7Z6G3 386 aa21.14■□□□□ 0.97
HDAC6-205ENST00000423941 CCDC83Q8IWF9 413 aa21.14■□□□□ 0.97
HDAC6-205ENST00000423941 BICD2Q8TD16 824 aa21.14■□□□□ 0.97
HDAC6-205ENST00000423941 WASF1Q92558 559 aa21.14■□□□□ 0.97
HDAC6-205ENST00000423941 TMX3Q96JJ7 454 aa21.14■□□□□ 0.97
HDAC6-205ENST00000423941 ANO3Q9BYT9 981 aa21.14■□□□□ 0.97
HDAC6-205ENST00000423941 UBIAD1Q9Y5Z9 338 aa21.14■□□□□ 0.97
HDAC6-205ENST00000423941 SPATA31C2B4DYI2 1134 aa21.13■□□□□ 0.97
HDAC6-205ENST00000423941 TXNP10599 105 aaKnown RBP21.13■□□□□ 0.97
HDAC6-205ENST00000423941 PTGS1P23219 599 aa21.13■□□□□ 0.97
HDAC6-205ENST00000423941 NLRP5P59047 1200 aa21.13■□□□□ 0.97
HDAC6-205ENST00000423941 IRX5P78411 483 aaPredicted RBP21.13■□□□□ 0.97
HDAC6-205ENST00000423941 GJC2Q5T442 439 aaPredicted RBP21.13■□□□□ 0.97
HDAC6-205ENST00000423941 SEPT14Q6ZU15 432 aa21.13■□□□□ 0.97
HDAC6-205ENST00000423941 RNF180Q86T96 592 aa21.13■□□□□ 0.97
HDAC6-205ENST00000423941 TLK2Q86UE8 772 aa21.13■□□□□ 0.97
HDAC6-205ENST00000423941 REXO1Q8N1G1 1221 aaKnown RBP21.13■□□□□ 0.97
HDAC6-205ENST00000423941 PCDHA4Q9UN74 947 aa21.13■□□□□ 0.97
HDAC6-205ENST00000423941 PHF24Q9UPV7 400 aa21.13■□□□□ 0.97
HDAC6-205ENST00000423941 MYADML2A6NDP7 307 aa21.12■□□□□ 0.97
HDAC6-205ENST00000423941 DYNC1LI2O43237 492 aaPredicted RBP21.12■□□□□ 0.97
HDAC6-205ENST00000423941 EDIL3O43854 480 aa21.12■□□□□ 0.97
HDAC6-205ENST00000423941 CYP3A4P08684 503 aa21.12■□□□□ 0.97
HDAC6-205ENST00000423941 ITGB5P18084 799 aa21.12■□□□□ 0.97
HDAC6-205ENST00000423941 SEMA3FQ13275 785 aa21.12■□□□□ 0.97
HDAC6-205ENST00000423941 EMID1Q96A84 441 aaPredicted RBP21.12■□□□□ 0.97
HDAC6-205ENST00000423941 ALG1Q9BT22 464 aa21.12■□□□□ 0.97
HDAC6-205ENST00000423941 EHMT1Q9H9B1 1298 aa21.12■□□□□ 0.97
HDAC6-205ENST00000423941 GJB4Q9NTQ9 266 aa21.12■□□□□ 0.97
HDAC6-205ENST00000423941 ALPK3Q96L96 1907 aa21.12■□□□□ 0.97
HDAC6-205ENST00000423941 SP2Q02086 613 aa21.11■□□□□ 0.97
HDAC6-205ENST00000423941 LY6KQ17RY6 165 aa21.11■□□□□ 0.97
HDAC6-205ENST00000423941 JAKMIP3Q5VZ66 844 aa21.11■□□□□ 0.97
HDAC6-205ENST00000423941 BLIDQ8IZY5 108 aa21.11■□□□□ 0.97
HDAC6-205ENST00000423941 COPS5Q92905 334 aa21.11■□□□□ 0.97
HDAC6-205ENST00000423941 ZFP91Q96JP5 570 aaPredicted RBP21.11■□□□□ 0.97
HDAC6-205ENST00000423941 C11orf49Q9H6J7 331 aa21.11■□□□□ 0.97
HDAC6-205ENST00000423941 SPC25Q9HBM1 224 aa21.11■□□□□ 0.97
HDAC6-205ENST00000423941 MOXD2PA6NHM9 499 aa21.1■□□□□ 0.97
HDAC6-205ENST00000423941 A6NJR5 290 aa21.1■□□□□ 0.97
HDAC6-205ENST00000423941 KBTBD13C9JR72 458 aa21.1■□□□□ 0.97
HDAC6-205ENST00000423941 MAFGO15525 162 aa21.1■□□□□ 0.97
HDAC6-205ENST00000423941 C6orf222P0C671 652 aaPredicted RBP21.1■□□□□ 0.97
HDAC6-205ENST00000423941 XBP1P17861 261 aa21.1■□□□□ 0.97
HDAC6-205ENST00000423941 ARHGAP4P98171 946 aa21.1■□□□□ 0.97
HDAC6-205ENST00000423941 ARHGAP1Q07960 439 aa21.1■□□□□ 0.97
HDAC6-205ENST00000423941 KCNA10Q16322 511 aa21.1■□□□□ 0.97
HDAC6-205ENST00000423941 GNPTABQ3T906 1256 aa21.1■□□□□ 0.97
HDAC6-205ENST00000423941 GNASQ5JWF2 1037 aa21.1■□□□□ 0.97
HDAC6-205ENST00000423941 GPRASP2Q96D09 838 aa21.1■□□□□ 0.97
HDAC6-205ENST00000423941 PGBD1Q96JS3 809 aa21.1■□□□□ 0.97
HDAC6-205ENST00000423941 SENP7Q9BQF6 1050 aa21.1■□□□□ 0.97
HDAC6-205ENST00000423941 AP5M1Q9H0R1 490 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms