RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-208ENST00000422080 TMEM265A0A087WTH1 108 aa20.56■□□□□ 0.88
HDLBP-208ENST00000422080 CCDC69A6NI79 296 aa20.56■□□□□ 0.88
HDLBP-208ENST00000422080 MMP3P08254 477 aa20.56■□□□□ 0.88
HDLBP-208ENST00000422080 ACRP10323 421 aa20.56■□□□□ 0.88
HDLBP-208ENST00000422080 LAMC2Q13753 1193 aa20.56■□□□□ 0.88
HDLBP-208ENST00000422080 RNF20Q5VTR2 975 aa20.56■□□□□ 0.88
HDLBP-208ENST00000422080 NFXL1Q6ZNB6 911 aa20.56■□□□□ 0.88
HDLBP-208ENST00000422080 ZNF365Q70YC5 407 aa20.56■□□□□ 0.88
HDLBP-208ENST00000422080 SKAP1Q86WV1 359 aa20.56■□□□□ 0.88
HDLBP-208ENST00000422080 CALM1P0DP23 149 aa20.55■□□□□ 0.88
HDLBP-208ENST00000422080 CALM2P0DP24 149 aa20.55■□□□□ 0.88
HDLBP-208ENST00000422080 CALM3P0DP25 149 aa20.55■□□□□ 0.88
HDLBP-208ENST00000422080 MYCLP12524 364 aaPredicted RBP20.55■□□□□ 0.88
HDLBP-208ENST00000422080 CASTP20810 708 aaKnown RBP20.55■□□□□ 0.88
HDLBP-208ENST00000422080 CCL23P55773 120 aa20.55■□□□□ 0.88
HDLBP-208ENST00000422080 PGM5Q15124 567 aa20.55■□□□□ 0.88
HDLBP-208ENST00000422080 RPUSD2Q8IZ73 545 aaKnown RBP20.55■□□□□ 0.88
HDLBP-208ENST00000422080 HERVK_113Q902F9 699 aa20.55■□□□□ 0.88
HDLBP-208ENST00000422080 RRP36Q96EU6 259 aaKnown RBP20.55■□□□□ 0.88
HDLBP-208ENST00000422080 FAM161BQ96MY7 647 aa20.55■□□□□ 0.88
HDLBP-208ENST00000422080 MYL10Q9BUA6 226 aa20.55■□□□□ 0.88
HDLBP-208ENST00000422080 RGS20O76081 388 aa20.54■□□□□ 0.88
HDLBP-208ENST00000422080 FGBP02675 491 aa20.54■□□□□ 0.88
HDLBP-208ENST00000422080 TGFB3P10600 412 aa20.54■□□□□ 0.88
HDLBP-208ENST00000422080 DGKDQ16760 1214 aa20.54■□□□□ 0.88
HDLBP-208ENST00000422080 FAM47CQ5HY64 1035 aa20.54■□□□□ 0.88
HDLBP-208ENST00000422080 SLC17A8Q8NDX2 589 aa20.54■□□□□ 0.88
HDLBP-208ENST00000422080 WNT8AQ9H1J5 351 aa20.54■□□□□ 0.88
HDLBP-208ENST00000422080 MTIF3Q9H2K0 278 aaKnown RBP20.54■□□□□ 0.88
HDLBP-208ENST00000422080 CYP2C9P11712 490 aa20.53■□□□□ 0.88
HDLBP-208ENST00000422080 CCND2P30279 289 aa20.53■□□□□ 0.88
HDLBP-208ENST00000422080 COL9A3Q14050 684 aaPredicted RBP20.53■□□□□ 0.88
HDLBP-208ENST00000422080 SESTD1Q86VW0 696 aa20.53■□□□□ 0.88
HDLBP-208ENST00000422080 SGMS1Q86VZ5 419 aa20.53■□□□□ 0.88
HDLBP-208ENST00000422080 FCHSD1Q86WN1 690 aa20.53■□□□□ 0.88
HDLBP-208ENST00000422080 DHX37Q8IY37 1157 aaKnown RBP20.53■□□□□ 0.88
HDLBP-208ENST00000422080 PPTC7Q8NI37 304 aa20.53■□□□□ 0.88
HDLBP-208ENST00000422080 PIBF1Q8WXW3 757 aa20.53■□□□□ 0.88
HDLBP-208ENST00000422080 CDX2Q99626 313 aaPredicted RBP20.53■□□□□ 0.88
HDLBP-208ENST00000422080 TTYH1Q9H313 450 aaPredicted RBP20.53■□□□□ 0.88
HDLBP-208ENST00000422080 SLC12A7Q9Y666 1083 aa20.53■□□□□ 0.88
HDLBP-208ENST00000422080 COL6A3P12111 3177 aa20.52■□□□□ 0.88
HDLBP-208ENST00000422080 CDC45O75419 566 aa20.52■□□□□ 0.88
HDLBP-208ENST00000422080 TSGA10IPQ3SY00 556 aa20.52■□□□□ 0.88
HDLBP-208ENST00000422080 SRBD1Q8N5C6 995 aaKnown RBP20.52■□□□□ 0.88
HDLBP-208ENST00000422080 IL31RAQ8NI17 732 aa20.52■□□□□ 0.88
HDLBP-208ENST00000422080 KAT2BQ92831 832 aa20.52■□□□□ 0.88
HDLBP-208ENST00000422080 SEC63Q9UGP8 760 aaKnown RBP20.52■□□□□ 0.88
HDLBP-208ENST00000422080 PIK3CDO00329 1044 aa20.51■□□□□ 0.87
HDLBP-208ENST00000422080 PPFIA4O75335 1185 aa20.51■□□□□ 0.87
HDLBP-208ENST00000422080 STAM2O75886 525 aa20.51■□□□□ 0.87
HDLBP-208ENST00000422080 PLEKHA8P1O95397 391 aa20.51■□□□□ 0.87
HDLBP-208ENST00000422080 HOXD8P13378 290 aaPredicted RBP20.51■□□□□ 0.87
HDLBP-208ENST00000422080 DNAJB2P25686 324 aa20.51■□□□□ 0.87
HDLBP-208ENST00000422080 CELF3Q5SZQ8 465 aaKnown RBP20.51■□□□□ 0.87
HDLBP-208ENST00000422080 MYSM1Q5VVJ2 828 aa20.51■□□□□ 0.87
HDLBP-208ENST00000422080 FANCBQ8NB91 859 aa20.51■□□□□ 0.87
HDLBP-208ENST00000422080 NEK1Q96PY6 1258 aa20.51■□□□□ 0.87
HDLBP-208ENST00000422080 FRMPD4Q14CM0 1322 aa20.51■□□□□ 0.87
HDLBP-208ENST00000422080 PITPNM1O00562 1244 aa20.5■□□□□ 0.87
HDLBP-208ENST00000422080 PFKMP08237 780 aa20.5■□□□□ 0.87
HDLBP-208ENST00000422080 RFC2P35250 354 aa20.5■□□□□ 0.87
HDLBP-208ENST00000422080 BFSP2Q13515 415 aa20.5■□□□□ 0.87
HDLBP-208ENST00000422080 SYNE3Q6ZMZ3 975 aa20.5■□□□□ 0.87
HDLBP-208ENST00000422080 RETREG2Q8NC44 543 aa20.5■□□□□ 0.87
HDLBP-208ENST00000422080 CUL5Q93034 780 aa20.5■□□□□ 0.87
HDLBP-208ENST00000422080 VWCEQ96DN2 955 aa20.5■□□□□ 0.87
HDLBP-208ENST00000422080 SCLYQ96I15 445 aa20.5■□□□□ 0.87
HDLBP-208ENST00000422080 KATNAL1Q9BW62 490 aa20.5■□□□□ 0.87
HDLBP-208ENST00000422080 LRRC2Q9BYS8 371 aa20.5■□□□□ 0.87
HDLBP-208ENST00000422080 CXXC1Q9P0U4 656 aaPredicted RBP20.5■□□□□ 0.87
HDLBP-208ENST00000422080 RXRAP19793 462 aa20.49■□□□□ 0.87
HDLBP-208ENST00000422080 CHMP4BP1P59074 171 aa20.49■□□□□ 0.87
HDLBP-208ENST00000422080 EXOSC10Q01780 885 aaKnown RBP20.49■□□□□ 0.87
HDLBP-208ENST00000422080 SP2Q02086 613 aa20.49■□□□□ 0.87
HDLBP-208ENST00000422080 PTGISQ16647 500 aa20.49■□□□□ 0.87
HDLBP-208ENST00000422080 GNPTABQ3T906 1256 aa20.49■□□□□ 0.87
HDLBP-208ENST00000422080 DHX32Q7L7V1 743 aaKnown RBP20.49■□□□□ 0.87
HDLBP-208ENST00000422080 OTOP2Q7RTS6 562 aa20.49■□□□□ 0.87
HDLBP-208ENST00000422080 SMARCC2Q8TAQ2 1214 aa20.49■□□□□ 0.87
HDLBP-208ENST00000422080 PPP1R13LQ8WUF5 828 aa20.49■□□□□ 0.87
HDLBP-208ENST00000422080 TIFAQ96CG3 184 aa20.49■□□□□ 0.87
HDLBP-208ENST00000422080 CCDC136Q96JN2 1154 aa20.49■□□□□ 0.87
HDLBP-208ENST00000422080 SPATA33Q96N06 139 aa20.49■□□□□ 0.87
HDLBP-208ENST00000422080 NOD1Q9Y239 953 aa20.49■□□□□ 0.87
HDLBP-208ENST00000422080 SCN10AQ9Y5Y9 1956 aa20.48■□□□□ 0.87
HDLBP-208ENST00000422080 GRXCR1A8MXD5 290 aa20.48■□□□□ 0.87
HDLBP-208ENST00000422080 MEIS2O14770 477 aa20.48■□□□□ 0.87
HDLBP-208ENST00000422080 GGPS1O95749 300 aa20.48■□□□□ 0.87
HDLBP-208ENST00000422080 F2P00734 622 aa20.48■□□□□ 0.87
HDLBP-208ENST00000422080 IQCF3P0C7M6 154 aa20.48■□□□□ 0.87
HDLBP-208ENST00000422080 UBA1P22314 1058 aaKnown RBP20.48■□□□□ 0.87
HDLBP-208ENST00000422080 ICAM3P32942 547 aa20.48■□□□□ 0.87
HDLBP-208ENST00000422080 PSEN2P49810 448 aa20.48■□□□□ 0.87
HDLBP-208ENST00000422080 MRPS9P82933 396 aaKnown RBP20.48■□□□□ 0.87
HDLBP-208ENST00000422080 KRT32Q14532 448 aa20.48■□□□□ 0.87
HDLBP-208ENST00000422080 XRRA1Q6P2D8 792 aa20.48■□□□□ 0.87
HDLBP-208ENST00000422080 USP17L6PQ6QN14 398 aa20.48■□□□□ 0.87
HDLBP-208ENST00000422080 TMTC3Q6ZXV5 915 aa20.48■□□□□ 0.87
HDLBP-208ENST00000422080 CMTR1Q8N1G2 835 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms