RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 PAGE5Q96GU1 130 aa16.05■□□□□ 0.16
CHRD-204ENST00000420973 WDR24Q96S15 920 aa16.05■□□□□ 0.16
CHRD-204ENST00000420973 DESI2Q9BSY9 194 aa16.05■□□□□ 0.16
CHRD-204ENST00000420973 PCDHA4Q9UN74 947 aa16.05■□□□□ 0.16
CHRD-204ENST00000420973 USP17L15C9J2P7 530 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 USP17L13C9JLJ4 530 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 USP17L11C9JVI0 530 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 USP17L18D6R9N7 530 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 USP17L22D6RA61 530 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 USP17L17D6RBQ6 530 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 USP17L19D6RCP7 530 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 USP17L20D6RJB6 530 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 PDHBP11177 359 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 UBXN2AP68543 259 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 USP17L24Q0WX57 530 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 LAMB3Q13751 1172 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 SEPT2Q15019 361 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 SLC35G1Q2M3R5 365 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 ARMCX5Q6P1M9 558 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 USP17L6PQ6QN14 398 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 IGSF22Q8N9C0 903 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 CRAMP1Q96RY5 1269 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 TCP11L1Q9NUJ3 509 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 TBC1D7Q9P0N9 293 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 USP17L10C9JJH3 530 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 ZEB2O60315 1214 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 GNGT1P63211 74 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 PPP2R5BQ15173 497 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 CCDC40Q4G0X9 1142 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 CAPRIN2Q6IMN6 1127 aaKnown RBP16.04■□□□□ 0.16
CHRD-204ENST00000420973 REXO1Q8N1G1 1221 aaKnown RBP16.04■□□□□ 0.16
CHRD-204ENST00000420973 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.04■□□□□ 0.16
CHRD-204ENST00000420973 ZNF232Q9UNY5 417 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 HPSEQ9Y251 543 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 PPFIA2O75334 1257 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 ASIC1P78348 528 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 LMBR1Q8WVP7 490 aa16.04■□□□□ 0.16
CHRD-204ENST00000420973 DDX20Q9UHI6 824 aaKnown RBP16.04■□□□□ 0.16
CHRD-204ENST00000420973 TRIM49BA6NDI0 452 aa16.03■□□□□ 0.16
CHRD-204ENST00000420973 DDTLA6NHG4 134 aaPredicted RBP16.03■□□□□ 0.16
CHRD-204ENST00000420973 CACNB1Q02641 598 aaPredicted RBP16.03■□□□□ 0.16
CHRD-204ENST00000420973 TBC1D25Q3MII6 688 aa16.03■□□□□ 0.16
CHRD-204ENST00000420973 TAB2Q9NYJ8 693 aa16.03■□□□□ 0.16
CHRD-204ENST00000420973 N4BP3O15049 544 aa16.03■□□□□ 0.16
CHRD-204ENST00000420973 MRPL12P52815 198 aaKnown RBP16.03■□□□□ 0.16
CHRD-204ENST00000420973 GNPTABQ3T906 1256 aa16.03■□□□□ 0.16
CHRD-204ENST00000420973 CERKLQ49MI3 558 aaPredicted RBP16.03■□□□□ 0.16
CHRD-204ENST00000420973 ZNF772Q68DY9 489 aaPredicted RBP16.03■□□□□ 0.16
CHRD-204ENST00000420973 SLC30A10Q6XR72 485 aa16.03■□□□□ 0.16
CHRD-204ENST00000420973 PKD2L1Q9P0L9 805 aa16.03■□□□□ 0.16
CHRD-204ENST00000420973 DDX60Q8IY21 1712 aaKnown RBP16.03■□□□□ 0.16
CHRD-204ENST00000420973 EIF4E1BA6NMX2 242 aaKnown RBP16.03■□□□□ 0.16
CHRD-204ENST00000420973 GRM4Q14833 912 aa16.03■□□□□ 0.16
CHRD-204ENST00000420973 NONOQ15233 471 aaKnown RBP eCLIP16.03■□□□□ 0.16
CHRD-204ENST00000420973 NRAPQ86VF7 1730 aa16.02■□□□□ 0.16
CHRD-204ENST00000420973 GOLGA6CA6NDK9 693 aa16.02■□□□□ 0.16
CHRD-204ENST00000420973 POTEMA6NI47 508 aa16.02■□□□□ 0.16
CHRD-204ENST00000420973 TDP2O95551 362 aa16.02■□□□□ 0.16
CHRD-204ENST00000420973 GOLGA6DP0CG33 693 aa16.02■□□□□ 0.16
CHRD-204ENST00000420973 IL1R1P14778 569 aa16.02■□□□□ 0.16
CHRD-204ENST00000420973 ANKRD23Q86SG2 305 aa16.02■□□□□ 0.16
CHRD-204ENST00000420973 B4GALNT2Q8NHY0 566 aa16.02■□□□□ 0.16
CHRD-204ENST00000420973 ZCWPW1Q9H0M4 648 aa16.02■□□□□ 0.16
CHRD-204ENST00000420973 GOLGA6AQ9NYA3 693 aa16.02■□□□□ 0.16
CHRD-204ENST00000420973 PCDHA6Q9UN73 950 aa16.02■□□□□ 0.16
CHRD-204ENST00000420973 PCDHA8Q9Y5H6 950 aa16.02■□□□□ 0.16
CHRD-204ENST00000420973 PCP11498 1178 aaKnown RBP16.02■□□□□ 0.15
CHRD-204ENST00000420973 NEDD1Q8NHV4 660 aa16.02■□□□□ 0.15
CHRD-204ENST00000420973 CSRNP1Q96S65 589 aa16.02■□□□□ 0.15
CHRD-204ENST00000420973 TEX33O43247 280 aa16.02■□□□□ 0.15
CHRD-204ENST00000420973 PPP4CP60510 307 aa16.02■□□□□ 0.15
CHRD-204ENST00000420973 NCAPHQ15003 741 aa16.02■□□□□ 0.15
CHRD-204ENST00000420973 DBN1Q16643 649 aa16.02■□□□□ 0.15
CHRD-204ENST00000420973 SARM1Q6SZW1 724 aa16.02■□□□□ 0.15
CHRD-204ENST00000420973 C16orf86Q6ZW13 317 aa16.02■□□□□ 0.15
CHRD-204ENST00000420973 PNKPQ96T60 521 aa16.02■□□□□ 0.15
CHRD-204ENST00000420973 COL22A1Q8NFW1 1626 aaPredicted RBP16.01■□□□□ 0.15
CHRD-204ENST00000420973 ACTN4O43707 911 aaKnown RBP16.01■□□□□ 0.15
CHRD-204ENST00000420973 RTN2O75298 545 aa16.01■□□□□ 0.15
CHRD-204ENST00000420973 CD44P16070 742 aaKnown RBP16.01■□□□□ 0.15
CHRD-204ENST00000420973 NPY5RQ15761 445 aa16.01■□□□□ 0.15
CHRD-204ENST00000420973 ENOX2Q16206 610 aaKnown RBP16.01■□□□□ 0.15
CHRD-204ENST00000420973 KIF4BQ2VIQ3 1234 aa16.01■□□□□ 0.15
CHRD-204ENST00000420973 CAPS2Q9BXY5 557 aa16.01■□□□□ 0.15
CHRD-204ENST00000420973 MTMR4Q9NYA4 1195 aa16.01■□□□□ 0.15
CHRD-204ENST00000420973 TMOD2Q9NZR1 351 aa16.01■□□□□ 0.15
CHRD-204ENST00000420973 DACH1Q9UI36 760 aa16.01■□□□□ 0.15
CHRD-204ENST00000420973 L1RE1Q9UN81 338 aa16.01■□□□□ 0.15
CHRD-204ENST00000420973 SYNRGQ9UMZ2 1314 aa16.01■□□□□ 0.15
CHRD-204ENST00000420973 GH2P01242 217 aa16.01■□□□□ 0.15
CHRD-204ENST00000420973 TPP2P29144 1249 aaPredicted RBP16.01■□□□□ 0.15
CHRD-204ENST00000420973 IRAK1P51617 712 aa16.01■□□□□ 0.15
CHRD-204ENST00000420973 PPARDQ03181 441 aa16.01■□□□□ 0.15
CHRD-204ENST00000420973 IL17AQ16552 155 aa16.01■□□□□ 0.15
CHRD-204ENST00000420973 B4GALNT4Q76KP1 1039 aa16.01■□□□□ 0.15
CHRD-204ENST00000420973 NOC3LQ8WTT2 800 aaKnown RBP16.01■□□□□ 0.15
CHRD-204ENST00000420973 FERMT2Q96AC1 680 aa16.01■□□□□ 0.15
CHRD-204ENST00000420973 TRIM47Q96LD4 638 aa16.01■□□□□ 0.15
CHRD-204ENST00000420973 POTEB2H3BUK9 544 aa16■□□□□ 0.15
CHRD-204ENST00000420973 GNA11P29992 359 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms