RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 CENPQQ7L2Z9 268 aaPredicted RBP24.7■■□□□ 1.54
PTPN4-202ENST00000420482 IGDCC4Q8TDY8 1250 aa24.7■■□□□ 1.54
PTPN4-202ENST00000420482 AFG1LQ8WV93 481 aa24.7■■□□□ 1.54
PTPN4-202ENST00000420482 TMEM87BQ96K49 555 aa24.7■■□□□ 1.54
PTPN4-202ENST00000420482 LZTS2Q9BRK4 669 aa24.7■■□□□ 1.54
PTPN4-202ENST00000420482 UMODL1Q5DID0 1318 aa24.69■■□□□ 1.54
PTPN4-202ENST00000420482 GBF1Q92538 1859 aa24.69■■□□□ 1.54
PTPN4-202ENST00000420482 CCDC69A6NI79 296 aa24.69■■□□□ 1.54
PTPN4-202ENST00000420482 OPLAHO14841 1288 aa24.69■■□□□ 1.54
PTPN4-202ENST00000420482 MMP3P08254 477 aa24.69■■□□□ 1.54
PTPN4-202ENST00000420482 MYCLP12524 364 aaPredicted RBP24.69■■□□□ 1.54
PTPN4-202ENST00000420482 GNAQP50148 359 aa24.69■■□□□ 1.54
PTPN4-202ENST00000420482 CHMP4BP1P59074 171 aa24.69■■□□□ 1.54
PTPN4-202ENST00000420482 ARHGAP1Q07960 439 aa24.69■■□□□ 1.54
PTPN4-202ENST00000420482 BFSP2Q13515 415 aa24.69■■□□□ 1.54
PTPN4-202ENST00000420482 DHX37Q8IY37 1157 aaKnown RBP24.69■■□□□ 1.54
PTPN4-202ENST00000420482 CCDC155Q8N6L0 562 aa24.69■■□□□ 1.54
PTPN4-202ENST00000420482 RETREG2Q8NC44 543 aa24.69■■□□□ 1.54
PTPN4-202ENST00000420482 EMID1Q96A84 441 aaPredicted RBP24.69■■□□□ 1.54
PTPN4-202ENST00000420482 TIFAQ96CG3 184 aa24.69■■□□□ 1.54
PTPN4-202ENST00000420482 PDCD2LQ9BRP1 358 aa24.69■■□□□ 1.54
PTPN4-202ENST00000420482 ESYT1Q9BSJ8 1104 aa24.69■■□□□ 1.54
PTPN4-202ENST00000420482 KATNAL1Q9BW62 490 aa24.69■■□□□ 1.54
PTPN4-202ENST00000420482 SEC63Q9UGP8 760 aaKnown RBP24.69■■□□□ 1.54
PTPN4-202ENST00000420482 DDX41Q9UJV9 622 aaKnown RBP24.69■■□□□ 1.54
PTPN4-202ENST00000420482 TAF6LQ9Y6J9 622 aa24.69■■□□□ 1.54
PTPN4-202ENST00000420482 KIAA1217Q5T5P2 1943 aa24.69■■□□□ 1.54
PTPN4-202ENST00000420482 PRC1O43663 620 aa24.68■■□□□ 1.54
PTPN4-202ENST00000420482 CYP2C9P11712 490 aa24.68■■□□□ 1.54
PTPN4-202ENST00000420482 FOSL2P15408 326 aa24.68■■□□□ 1.54
PTPN4-202ENST00000420482 HOXA13P31271 388 aaPredicted RBP24.68■■□□□ 1.54
PTPN4-202ENST00000420482 RAB30Q15771 203 aa24.68■■□□□ 1.54
PTPN4-202ENST00000420482 RNF20Q5VTR2 975 aa24.68■■□□□ 1.54
PTPN4-202ENST00000420482 ZNF654Q8IZM8 581 aa24.68■■□□□ 1.54
PTPN4-202ENST00000420482 RRP36Q96EU6 259 aaKnown RBP24.68■■□□□ 1.54
PTPN4-202ENST00000420482 WNT8AQ9H1J5 351 aa24.68■■□□□ 1.54
PTPN4-202ENST00000420482 SENP2Q9HC62 589 aa24.68■■□□□ 1.54
PTPN4-202ENST00000420482 ANO2Q9NQ90 1003 aa24.68■■□□□ 1.54
PTPN4-202ENST00000420482 MSRAQ9UJ68 235 aa24.68■■□□□ 1.54
PTPN4-202ENST00000420482 SCN10AQ9Y5Y9 1956 aa24.67■■□□□ 1.54
PTPN4-202ENST00000420482 MYO9BQ13459 2157 aa24.67■■□□□ 1.54
PTPN4-202ENST00000420482 PITPNM1O00562 1244 aa24.67■■□□□ 1.54
PTPN4-202ENST00000420482 CALM1P0DP23 149 aa24.67■■□□□ 1.54
PTPN4-202ENST00000420482 CALM2P0DP24 149 aa24.67■■□□□ 1.54
PTPN4-202ENST00000420482 CALM3P0DP25 149 aa24.67■■□□□ 1.54
PTPN4-202ENST00000420482 SMARCA1P28370 1054 aa24.67■■□□□ 1.54
PTPN4-202ENST00000420482 CCND2P30279 289 aa24.67■■□□□ 1.54
PTPN4-202ENST00000420482 RFC2P35250 354 aa24.67■■□□□ 1.54
PTPN4-202ENST00000420482 ANTXR2P58335 489 aa24.67■■□□□ 1.54
PTPN4-202ENST00000420482 PGM5Q15124 567 aa24.67■■□□□ 1.54
PTPN4-202ENST00000420482 BMP2KLQ5H9B9 411 aa24.67■■□□□ 1.54
PTPN4-202ENST00000420482 OTOP2Q7RTS6 562 aa24.67■■□□□ 1.54
PTPN4-202ENST00000420482 VSIG10LQ86VR7 867 aa24.67■■□□□ 1.54
PTPN4-202ENST00000420482 SPZ1Q9BXG8 430 aa24.67■■□□□ 1.54
PTPN4-202ENST00000420482 LSG1Q9H089 658 aaKnown RBP24.67■■□□□ 1.54
PTPN4-202ENST00000420482 LY9Q9HBG7 655 aa24.67■■□□□ 1.54
PTPN4-202ENST00000420482 CYTH3O43739 400 aa24.66■■□□□ 1.54
PTPN4-202ENST00000420482 TGFB3P10600 412 aa24.66■■□□□ 1.54
PTPN4-202ENST00000420482 ACTN1P12814 892 aa24.66■■□□□ 1.54
PTPN4-202ENST00000420482 GNPTABQ3T906 1256 aa24.66■■□□□ 1.54
PTPN4-202ENST00000420482 FCHSD1Q86WN1 690 aa24.66■■□□□ 1.54
PTPN4-202ENST00000420482 PPTC7Q8NI37 304 aa24.66■■□□□ 1.54
PTPN4-202ENST00000420482 CUL5Q93034 780 aa24.66■■□□□ 1.54
PTPN4-202ENST00000420482 SCLYQ96I15 445 aa24.66■■□□□ 1.54
PTPN4-202ENST00000420482 ZNF576Q9H609 170 aa24.66■■□□□ 1.54
PTPN4-202ENST00000420482 SLC4A7Q9Y6M7 1214 aa24.66■■□□□ 1.54
PTPN4-202ENST00000420482 SLC27A2O14975 620 aa24.65■■□□□ 1.54
PTPN4-202ENST00000420482 STAM2O75886 525 aa24.65■■□□□ 1.54
PTPN4-202ENST00000420482 VCANP13611 3396 aa24.65■■□□□ 1.54
PTPN4-202ENST00000420482 PTGISQ16647 500 aa24.65■■□□□ 1.54
PTPN4-202ENST00000420482 PBX4Q9BYU1 374 aa24.65■■□□□ 1.54
PTPN4-202ENST00000420482 ZBBXA8MT70 800 aa24.64■■□□□ 1.54
PTPN4-202ENST00000420482 LIFRP42702 1097 aa24.64■■□□□ 1.54
PTPN4-202ENST00000420482 CREB3L3Q68CJ9 461 aa24.64■■□□□ 1.54
PTPN4-202ENST00000420482 SESTD1Q86VW0 696 aa24.64■■□□□ 1.54
PTPN4-202ENST00000420482 C7orf31Q8N865 590 aa24.64■■□□□ 1.54
PTPN4-202ENST00000420482 CAGE1Q8TC20 777 aa24.64■■□□□ 1.54
PTPN4-202ENST00000420482 PPFIA4O75335 1185 aa24.63■■□□□ 1.53
PTPN4-202ENST00000420482 NECTIN1Q15223 517 aa24.63■■□□□ 1.53
PTPN4-202ENST00000420482 SLC35G1Q2M3R5 365 aa24.63■■□□□ 1.53
PTPN4-202ENST00000420482 SMARCC2Q8TAQ2 1214 aa24.63■■□□□ 1.53
PTPN4-202ENST00000420482 PIBF1Q8WXW3 757 aa24.63■■□□□ 1.53
PTPN4-202ENST00000420482 SLC12A7Q9Y666 1083 aa24.63■■□□□ 1.53
PTPN4-202ENST00000420482 TTC28Q96AY4 2481 aa24.62■■□□□ 1.53
PTPN4-202ENST00000420482 SH2B2O14492 632 aaPredicted RBP24.62■■□□□ 1.53
PTPN4-202ENST00000420482 SYNE3Q6ZMZ3 975 aa24.62■■□□□ 1.53
PTPN4-202ENST00000420482 SPATA33Q96N06 139 aa24.62■■□□□ 1.53
PTPN4-202ENST00000420482 MYL10Q9BUA6 226 aa24.62■■□□□ 1.53
PTPN4-202ENST00000420482 MLXIPQ9HAP2 919 aa24.62■■□□□ 1.53
PTPN4-202ENST00000420482 SLC28A3Q9HAS3 691 aa24.62■■□□□ 1.53
PTPN4-202ENST00000420482 CXXC1Q9P0U4 656 aaPredicted RBP24.62■■□□□ 1.53
PTPN4-202ENST00000420482 SPTBN5Q9NRC6 3674 aaKnown RBP24.62■■□□□ 1.53
PTPN4-202ENST00000420482 GRXCR1A8MXD5 290 aa24.61■■□□□ 1.53
PTPN4-202ENST00000420482 PARNO95453 639 aaKnown RBP24.61■■□□□ 1.53
PTPN4-202ENST00000420482 GGPS1O95749 300 aa24.61■■□□□ 1.53
PTPN4-202ENST00000420482 GRIN2CQ14957 1233 aa24.61■■□□□ 1.53
PTPN4-202ENST00000420482 CELF3Q5SZQ8 465 aaKnown RBP24.61■■□□□ 1.53
PTPN4-202ENST00000420482 MYSM1Q5VVJ2 828 aa24.61■■□□□ 1.53
PTPN4-202ENST00000420482 DEFB128Q7Z7B8 93 aa24.61■■□□□ 1.53
PTPN4-202ENST00000420482 AFAP1L1Q8TED9 768 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms