RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 CYTH3O43739 400 aa29.34■■■□□ 2.29
VEGFA-208ENST00000417285 PFKMP08237 780 aa29.34■■■□□ 2.29
VEGFA-208ENST00000417285 MMP3P08254 477 aa29.34■■■□□ 2.29
VEGFA-208ENST00000417285 CYP2C9P11712 490 aa29.34■■■□□ 2.29
VEGFA-208ENST00000417285 SMARCA1P28370 1054 aa29.34■■■□□ 2.29
VEGFA-208ENST00000417285 KIF5BP33176 963 aa29.34■■■□□ 2.29
VEGFA-208ENST00000417285 DGKDQ16760 1214 aa29.34■■■□□ 2.29
VEGFA-208ENST00000417285 MRVI1Q9Y6F6 885 aa29.34■■■□□ 2.29
VEGFA-208ENST00000417285 HOXA13P31271 388 aaPredicted RBP29.33■■■□□ 2.29
VEGFA-208ENST00000417285 MCM5P33992 734 aa29.33■■■□□ 2.29
VEGFA-208ENST00000417285 RETREG2Q8NC44 543 aa29.33■■■□□ 2.29
VEGFA-208ENST00000417285 LZTS2Q9BRK4 669 aa29.33■■■□□ 2.29
VEGFA-208ENST00000417285 ZNF576Q9H609 170 aa29.33■■■□□ 2.29
VEGFA-208ENST00000417285 DLL1O00548 723 aa29.32■■■□□ 2.28
VEGFA-208ENST00000417285 PITPNM1O00562 1244 aa29.32■■■□□ 2.28
VEGFA-208ENST00000417285 TGFB3P10600 412 aa29.32■■■□□ 2.28
VEGFA-208ENST00000417285 MYCLP12524 364 aaPredicted RBP29.32■■■□□ 2.28
VEGFA-208ENST00000417285 DHX37Q8IY37 1157 aaKnown RBP29.32■■■□□ 2.28
VEGFA-208ENST00000417285 CTCFLQ8NI51 663 aaPredicted RBP29.32■■■□□ 2.28
VEGFA-208ENST00000417285 MYLIPQ8WY64 445 aa29.32■■■□□ 2.28
VEGFA-208ENST00000417285 LY9Q9HBG7 655 aa29.32■■■□□ 2.28
VEGFA-208ENST00000417285 MSRAQ9UJ68 235 aa29.32■■■□□ 2.28
VEGFA-208ENST00000417285 NOD1Q9Y239 953 aa29.32■■■□□ 2.28
VEGFA-208ENST00000417285 PRC1O43663 620 aa29.31■■■□□ 2.28
VEGFA-208ENST00000417285 DDAH1O94760 285 aa29.31■■■□□ 2.28
VEGFA-208ENST00000417285 RFC2P35250 354 aa29.31■■■□□ 2.28
VEGFA-208ENST00000417285 GNAQP50148 359 aa29.31■■■□□ 2.28
VEGFA-208ENST00000417285 BFSP2Q13515 415 aa29.31■■■□□ 2.28
VEGFA-208ENST00000417285 RAB30Q15771 203 aa29.31■■■□□ 2.28
VEGFA-208ENST00000417285 OTOP2Q7RTS6 562 aa29.31■■■□□ 2.28
VEGFA-208ENST00000417285 SESTD1Q86VW0 696 aa29.31■■■□□ 2.28
VEGFA-208ENST00000417285 TMEM87BQ96K49 555 aa29.31■■■□□ 2.28
VEGFA-208ENST00000417285 PBX4Q9BYU1 374 aa29.31■■■□□ 2.28
VEGFA-208ENST00000417285 ANO2Q9NQ90 1003 aa29.31■■■□□ 2.28
VEGFA-208ENST00000417285 CXXC1Q9P0U4 656 aaPredicted RBP29.31■■■□□ 2.28
VEGFA-208ENST00000417285 GRXCR1A8MXD5 290 aa29.3■■■□□ 2.28
VEGFA-208ENST00000417285 PGM5Q15124 567 aa29.3■■■□□ 2.28
VEGFA-208ENST00000417285 ZNF654Q8IZM8 581 aa29.3■■■□□ 2.28
VEGFA-208ENST00000417285 MAFAQ8NHW3 353 aaPredicted RBP29.3■■■□□ 2.28
VEGFA-208ENST00000417285 PPTC7Q8NI37 304 aa29.3■■■□□ 2.28
VEGFA-208ENST00000417285 SCLYQ96I15 445 aa29.3■■■□□ 2.28
VEGFA-208ENST00000417285 SPZ1Q9BXG8 430 aa29.3■■■□□ 2.28
VEGFA-208ENST00000417285 SLC4A7Q9Y6M7 1214 aa29.3■■■□□ 2.28
VEGFA-208ENST00000417285 SCN10AQ9Y5Y9 1956 aa29.3■■■□□ 2.28
VEGFA-208ENST00000417285 PPFIA4O75335 1185 aa29.29■■■□□ 2.28
VEGFA-208ENST00000417285 FOSL2P15408 326 aa29.29■■■□□ 2.28
VEGFA-208ENST00000417285 CCND2P30279 289 aa29.29■■■□□ 2.28
VEGFA-208ENST00000417285 CHMP4BP1P59074 171 aa29.29■■■□□ 2.28
VEGFA-208ENST00000417285 GRIN2CQ14957 1233 aa29.29■■■□□ 2.28
VEGFA-208ENST00000417285 NECTIN1Q15223 517 aa29.29■■■□□ 2.28
VEGFA-208ENST00000417285 FCHSD1Q86WN1 690 aa29.29■■■□□ 2.28
VEGFA-208ENST00000417285 SKAP1Q86WV1 359 aa29.29■■■□□ 2.28
VEGFA-208ENST00000417285 KAT2BQ92831 832 aa29.29■■■□□ 2.28
VEGFA-208ENST00000417285 RRP36Q96EU6 259 aaKnown RBP29.29■■■□□ 2.28
VEGFA-208ENST00000417285 MYH6P13533 1939 aa29.29■■■□□ 2.28
VEGFA-208ENST00000417285 SLC27A2O14975 620 aa29.28■■■□□ 2.28
VEGFA-208ENST00000417285 RGS20O76081 388 aa29.28■■■□□ 2.28
VEGFA-208ENST00000417285 LIFRP42702 1097 aa29.28■■■□□ 2.28
VEGFA-208ENST00000417285 PTGISQ16647 500 aa29.28■■■□□ 2.28
VEGFA-208ENST00000417285 NFXL1Q6ZNB6 911 aa29.28■■■□□ 2.28
VEGFA-208ENST00000417285 CCDC155Q8N6L0 562 aa29.28■■■□□ 2.28
VEGFA-208ENST00000417285 KATNAL1Q9BW62 490 aa29.28■■■□□ 2.28
VEGFA-208ENST00000417285 CHD9Q3L8U1 2897 aa29.27■■■□□ 2.28
VEGFA-208ENST00000417285 CCDC69A6NI79 296 aa29.27■■■□□ 2.28
VEGFA-208ENST00000417285 CALM1P0DP23 149 aa29.27■■■□□ 2.28
VEGFA-208ENST00000417285 CALM2P0DP24 149 aa29.27■■■□□ 2.28
VEGFA-208ENST00000417285 CALM3P0DP25 149 aa29.27■■■□□ 2.28
VEGFA-208ENST00000417285 PBX2P40425 430 aa29.27■■■□□ 2.28
VEGFA-208ENST00000417285 MYSM1Q5VVJ2 828 aa29.27■■■□□ 2.28
VEGFA-208ENST00000417285 CREB3L3Q68CJ9 461 aa29.27■■■□□ 2.28
VEGFA-208ENST00000417285 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.27■■■□□ 2.283e-13■■□□□ 13.7
VEGFA-208ENST00000417285 VWCEQ96DN2 955 aa29.27■■■□□ 2.28
VEGFA-208ENST00000417285 STAM2O75886 525 aa29.26■■■□□ 2.27
VEGFA-208ENST00000417285 IQCF3P0C7M6 154 aa29.26■■■□□ 2.27
VEGFA-208ENST00000417285 ACTN1P12814 892 aa29.26■■■□□ 2.27
VEGFA-208ENST00000417285 CELF3Q5SZQ8 465 aaKnown RBP29.26■■■□□ 2.27
VEGFA-208ENST00000417285 C7orf31Q8N865 590 aa29.26■■■□□ 2.27
VEGFA-208ENST00000417285 CAGE1Q8TC20 777 aa29.26■■■□□ 2.27
VEGFA-208ENST00000417285 SEC63Q9UGP8 760 aaKnown RBP29.26■■■□□ 2.27
VEGFA-208ENST00000417285 BAZ2BQ9UIF8 2168 aaKnown RBP29.25■■■□□ 2.27
VEGFA-208ENST00000417285 SH2B2O14492 632 aaPredicted RBP29.25■■■□□ 2.27
VEGFA-208ENST00000417285 HOXD8P13378 290 aaPredicted RBP29.25■■■□□ 2.27
VEGFA-208ENST00000417285 RNF20Q5VTR2 975 aa29.25■■■□□ 2.27
VEGFA-208ENST00000417285 PPP1R13LQ8WUF5 828 aa29.25■■■□□ 2.27
VEGFA-208ENST00000417285 PIBF1Q8WXW3 757 aa29.25■■■□□ 2.27
VEGFA-208ENST00000417285 CCDC136Q96JN2 1154 aa29.25■■■□□ 2.27
VEGFA-208ENST00000417285 PSEN2P49810 448 aa29.24■■■□□ 2.27
VEGFA-208ENST00000417285 GNPTABQ3T906 1256 aa29.24■■■□□ 2.27
VEGFA-208ENST00000417285 DEFB128Q7Z7B8 93 aa29.24■■■□□ 2.27
VEGFA-208ENST00000417285 IL31RAQ8NI17 732 aa29.24■■■□□ 2.27
VEGFA-208ENST00000417285 CUL5Q93034 780 aa29.24■■■□□ 2.27
VEGFA-208ENST00000417285 SPATA33Q96N06 139 aa29.24■■■□□ 2.27
VEGFA-208ENST00000417285 MYL10Q9BUA6 226 aa29.24■■■□□ 2.27
VEGFA-208ENST00000417285 SLC28A3Q9HAS3 691 aa29.24■■■□□ 2.27
VEGFA-208ENST00000417285 ZBBXA8MT70 800 aa29.23■■■□□ 2.27
VEGFA-208ENST00000417285 GGPS1O95749 300 aa29.23■■■□□ 2.27
VEGFA-208ENST00000417285 F2P00734 622 aa29.23■■■□□ 2.27
VEGFA-208ENST00000417285 GDF6Q6KF10 455 aaPredicted RBP29.23■■■□□ 2.27
VEGFA-208ENST00000417285 AFAP1L1Q8TED9 768 aa29.23■■■□□ 2.27
VEGFA-208ENST00000417285 MLXIPQ9HAP2 919 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms