RNA–Protein interactions for RNA: ENST00000410070.6

RIMKLA-201, Transcript of ribosomal modification protein rimK like family member A, humanhuman

TSL 3

Gene RIMKLA, Length 864 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-201ENST00000410070 DDX41Q9UJV9 622 aaKnown RBP26.54■■□□□ 1.84
RIMKLA-201ENST00000410070 KIAA1217Q5T5P2 1943 aa26.54■■□□□ 1.84
RIMKLA-201ENST00000410070 RFXAPO00287 272 aa26.53■■□□□ 1.84
RIMKLA-201ENST00000410070 BMP1P13497 986 aa26.53■■□□□ 1.84
RIMKLA-201ENST00000410070 TAP1Q03518 808 aa26.53■■□□□ 1.84
RIMKLA-201ENST00000410070 STXBP2Q15833 593 aa26.53■■□□□ 1.84
RIMKLA-201ENST00000410070 SEPT14Q6ZU15 432 aa26.53■■□□□ 1.84
RIMKLA-201ENST00000410070 HERC6Q8IVU3 1022 aa26.53■■□□□ 1.84
RIMKLA-201ENST00000410070 CAGE1Q8TC20 777 aa26.53■■□□□ 1.84
RIMKLA-201ENST00000410070 AFAP1L1Q8TED9 768 aa26.53■■□□□ 1.84
RIMKLA-201ENST00000410070 TRIP12Q14669 1992 aaPredicted RBP26.53■■□□□ 1.84
RIMKLA-201ENST00000410070 BAIAP3O94812 1187 aa26.52■■□□□ 1.84
RIMKLA-201ENST00000410070 HSD17B4P51659 736 aa26.52■■□□□ 1.84
RIMKLA-201ENST00000410070 FBXO11Q86XK2 927 aa26.52■■□□□ 1.84
RIMKLA-201ENST00000410070 MTMR8Q96EF0 704 aa26.52■■□□□ 1.84
RIMKLA-201ENST00000410070 MRPL11Q9Y3B7 192 aaKnown RBP26.52■■□□□ 1.84
RIMKLA-201ENST00000410070 EIF3JO75822 258 aaKnown RBP26.51■■□□□ 1.83
RIMKLA-201ENST00000410070 HOXD8P13378 290 aaPredicted RBP26.51■■□□□ 1.83
RIMKLA-201ENST00000410070 IL25Q9H293 177 aa26.51■■□□□ 1.83
RIMKLA-201ENST00000410070 PXMP2Q9NR77 195 aa26.51■■□□□ 1.83
RIMKLA-201ENST00000410070 GTF2IRD1Q9UHL9 959 aa26.51■■□□□ 1.83
RIMKLA-201ENST00000410070 PTPRSQ13332 1948 aa26.51■■□□□ 1.83
RIMKLA-201ENST00000410070 HAS3O00219 553 aa26.5■■□□□ 1.83
RIMKLA-201ENST00000410070 RGS20O76081 388 aa26.5■■□□□ 1.83
RIMKLA-201ENST00000410070 CXCL10P02778 98 aa26.5■■□□□ 1.83
RIMKLA-201ENST00000410070 PARP1P09874 1014 aaKnown RBP26.5■■□□□ 1.83
RIMKLA-201ENST00000410070 CASTP20810 708 aaKnown RBP26.5■■□□□ 1.83
RIMKLA-201ENST00000410070 SEC23AQ15436 765 aa26.5■■□□□ 1.83
RIMKLA-201ENST00000410070 STAG2Q8N3U4 1231 aa26.5■■□□□ 1.83
RIMKLA-201ENST00000410070 UHRF1Q96T88 793 aaPredicted RBP26.5■■□□□ 1.83
RIMKLA-201ENST00000410070 FTOQ9C0B1 505 aaKnown RBP eCLIP26.5■■□□□ 1.83
RIMKLA-201ENST00000410070 DIAPH3Q9NSV4 1193 aa26.5■■□□□ 1.83
RIMKLA-201ENST00000410070 NOD1Q9Y239 953 aa26.5■■□□□ 1.83
RIMKLA-201ENST00000410070 HIP1O00291 1037 aa26.49■■□□□ 1.83
RIMKLA-201ENST00000410070 PPP1R11O60927 126 aaPredicted RBP26.49■■□□□ 1.83
RIMKLA-201ENST00000410070 NR3C2P08235 984 aa26.49■■□□□ 1.83
RIMKLA-201ENST00000410070 SELPP16109 830 aa26.49■■□□□ 1.83
RIMKLA-201ENST00000410070 DGKDQ16760 1214 aa26.49■■□□□ 1.83
RIMKLA-201ENST00000410070 TRAF7Q6Q0C0 670 aa26.49■■□□□ 1.83
RIMKLA-201ENST00000410070 LPXNO60711 386 aa26.48■■□□□ 1.83
RIMKLA-201ENST00000410070 F2P00734 622 aa26.48■■□□□ 1.83
RIMKLA-201ENST00000410070 EIF2AK2P19525 551 aaKnown RBP26.48■■□□□ 1.83
RIMKLA-201ENST00000410070 WDR5P61964 334 aaKnown RBP26.48■■□□□ 1.83
RIMKLA-201ENST00000410070 TFF2Q03403 129 aa26.48■■□□□ 1.83
RIMKLA-201ENST00000410070 IMMTQ16891 758 aaKnown RBP26.48■■□□□ 1.83
RIMKLA-201ENST00000410070 SLC35G1Q2M3R5 365 aa26.48■■□□□ 1.83
RIMKLA-201ENST00000410070 TCTN1Q2MV58 587 aa26.48■■□□□ 1.83
RIMKLA-201ENST00000410070 TRIM71Q2Q1W2 868 aaKnown RBP26.48■■□□□ 1.83
RIMKLA-201ENST00000410070 ARHGEF16Q5VV41 709 aa26.48■■□□□ 1.83
RIMKLA-201ENST00000410070 STOX1Q6ZVD7 989 aa26.48■■□□□ 1.83
RIMKLA-201ENST00000410070 CCDC155Q8N6L0 562 aa26.48■■□□□ 1.83
RIMKLA-201ENST00000410070 PPTC7Q8NI37 304 aa26.48■■□□□ 1.83
RIMKLA-201ENST00000410070 KRT23Q9C075 422 aa26.48■■□□□ 1.83
RIMKLA-201ENST00000410070 TSPYL2Q9H2G4 693 aaPredicted RBP26.48■■□□□ 1.83
RIMKLA-201ENST00000410070 CERS4Q9HA82 394 aa26.48■■□□□ 1.83
RIMKLA-201ENST00000410070 HDAC6Q9UBN7 1215 aa26.48■■□□□ 1.83
RIMKLA-201ENST00000410070 NBNO60934 754 aa26.47■■□□□ 1.83
RIMKLA-201ENST00000410070 LRRC8DQ7L1W4 858 aa26.47■■□□□ 1.83
RIMKLA-201ENST00000410070 CHST3Q7LGC8 479 aa26.47■■□□□ 1.83
RIMKLA-201ENST00000410070 SPRED2Q7Z698 418 aa26.47■■□□□ 1.83
RIMKLA-201ENST00000410070 CNNM2Q9H8M5 875 aa26.47■■□□□ 1.83
RIMKLA-201ENST00000410070 VAT1LQ9HCJ6 419 aa26.47■■□□□ 1.83
RIMKLA-201ENST00000410070 MAP3K20Q9NYL2 800 aaKnown RBP26.47■■□□□ 1.83
RIMKLA-201ENST00000410070 CTNNA3Q9UI47 895 aa26.47■■□□□ 1.83
RIMKLA-201ENST00000410070 MAD2L2Q9UI95 211 aa26.47■■□□□ 1.83
RIMKLA-201ENST00000410070 MYH6P13533 1939 aa26.47■■□□□ 1.83
RIMKLA-201ENST00000410070 PARNO95453 639 aaKnown RBP26.46■■□□□ 1.83
RIMKLA-201ENST00000410070 CKBP12277 381 aa26.46■■□□□ 1.83
RIMKLA-201ENST00000410070 LAMC2Q13753 1193 aa26.46■■□□□ 1.83
RIMKLA-201ENST00000410070 KRT40Q6A162 431 aa26.46■■□□□ 1.83
RIMKLA-201ENST00000410070 PDCD2LQ9BRP1 358 aa26.46■■□□□ 1.83
RIMKLA-201ENST00000410070 AMNQ9BXJ7 453 aa26.46■■□□□ 1.83
RIMKLA-201ENST00000410070 PALM3A6NDB9 673 aaPredicted RBP26.45■■□□□ 1.82
RIMKLA-201ENST00000410070 KIF28PB7ZC32 967 aa26.45■■□□□ 1.82
RIMKLA-201ENST00000410070 CFBP00751 764 aa26.45■■□□□ 1.82
RIMKLA-201ENST00000410070 PSEN2P49810 448 aa26.45■■□□□ 1.82
RIMKLA-201ENST00000410070 CHMP4BP1P59074 171 aa26.45■■□□□ 1.82
RIMKLA-201ENST00000410070 CYB5R4Q7L1T6 521 aa26.45■■□□□ 1.82
RIMKLA-201ENST00000410070 VSIG10LQ86VR7 867 aa26.45■■□□□ 1.82
RIMKLA-201ENST00000410070 MICALL1Q8N3F8 863 aa26.45■■□□□ 1.82
RIMKLA-201ENST00000410070 WNT8BQ93098 351 aa26.45■■□□□ 1.82
RIMKLA-201ENST00000410070 BRWD1Q9NSI6 2320 aa26.45■■□□□ 1.82
RIMKLA-201ENST00000410070 LCHNA4D1U4 455 aa26.44■■□□□ 1.82
RIMKLA-201ENST00000410070 KLRF2D3W0D1 207 aa26.44■■□□□ 1.82
RIMKLA-201ENST00000410070 ZBTB5O15062 677 aa26.44■■□□□ 1.82
RIMKLA-201ENST00000410070 PTK7Q13308 1070 aa26.44■■□□□ 1.82
RIMKLA-201ENST00000410070 HIC1Q14526 733 aa26.44■■□□□ 1.82
RIMKLA-201ENST00000410070 MBTPS1Q14703 1052 aa26.44■■□□□ 1.82
RIMKLA-201ENST00000410070 IFIT1BQ5T764 474 aaKnown RBP26.44■■□□□ 1.82
RIMKLA-201ENST00000410070 MYSM1Q5VVJ2 828 aa26.44■■□□□ 1.82
RIMKLA-201ENST00000410070 CNKSR3Q6P9H4 555 aa26.44■■□□□ 1.82
RIMKLA-201ENST00000410070 SAMD3Q8N6K7 520 aa26.44■■□□□ 1.82
RIMKLA-201ENST00000410070 ARNTL2Q8WYA1 636 aa26.44■■□□□ 1.82
RIMKLA-201ENST00000410070 NECAB3Q96P71 396 aaPredicted RBP26.44■■□□□ 1.82
RIMKLA-201ENST00000410070 UBAC1Q9BSL1 405 aa26.44■■□□□ 1.82
RIMKLA-201ENST00000410070 MRVI1Q9Y6F6 885 aa26.44■■□□□ 1.82
RIMKLA-201ENST00000410070 GTPBP6O43824 516 aaPredicted RBP26.43■■□□□ 1.82
RIMKLA-201ENST00000410070 PPFIA4O75335 1185 aa26.43■■□□□ 1.82
RIMKLA-201ENST00000410070 COL9A1P20849 921 aa26.43■■□□□ 1.82
RIMKLA-201ENST00000410070 KCNQ1P51787 676 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms