RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 CABP7Q86V35 215 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 IRF2BP1Q8IU81 584 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 TXLNBQ8N3L3 684 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 MB21D1Q8N884 522 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 IFT81Q8WYA0 676 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 SAR1BQ9Y6B6 198 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 USP17L5A8MUK1 530 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 MPHOSPH10O00566 681 aaKnown RBP10.35□□□□□ -0.75
NDE1-201ENST00000396354 EDIL3O43854 480 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 RNF40O75150 1001 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 EIF3JO75822 258 aaKnown RBP10.35□□□□□ -0.75
NDE1-201ENST00000396354 SRGNP10124 158 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 KIF5BP33176 963 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 SLC16A2P36021 539 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 CCDC181Q5TID7 509 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 TAF3Q5VWG9 929 aa10.35□□□□□ -0.75
NDE1-201ENST00000396354 NHEJ1Q9H9Q4 299 aaPredicted RBP10.35□□□□□ -0.75
NDE1-201ENST00000396354 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.35□□□□□ -0.751e-6■■■■■ 82.1
NDE1-201ENST00000396354 QSER1Q2KHR3 1735 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 SMCO2A6NFE2 343 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 PDE2AO00408 941 aaPredicted RBP10.34□□□□□ -0.75
NDE1-201ENST00000396354 BAG3O95817 575 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 TAL1P17542 331 aaPredicted RBP10.34□□□□□ -0.75
NDE1-201ENST00000396354 CACNB3P54284 484 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 NFIAQ12857 509 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 NAALADL2Q58DX5 795 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 NFRKBQ6P4R8 1299 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 SND1Q7KZF4 910 aaKnown RBP eCLIP10.34□□□□□ -0.75
NDE1-201ENST00000396354 RRP36Q96EU6 259 aaKnown RBP10.34□□□□□ -0.75
NDE1-201ENST00000396354 MS4A14Q96JA4 679 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 PIGSQ96S52 555 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 RWDD2AQ9UIY3 292 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 FAM196BA6NMK8 535 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 BBOX1O75936 387 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 AKR1B1P15121 316 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 ATP1A2P50993 1020 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 SNAP25P60880 206 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 HERVK_113P62684 666 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 SPA17Q15506 151 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 UBE2SQ16763 222 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 SOGA3Q5TF21 947 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 CACNA2D4Q7Z3S7 1137 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 COG1Q8WTW3 980 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 CRAMP1Q96RY5 1269 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 FAM53CQ9NYF3 392 aa10.34□□□□□ -0.75
NDE1-201ENST00000396354 ZSCAN5CA6NGD5 496 aaPredicted RBP10.33□□□□□ -0.76
NDE1-201ENST00000396354 MMP10P09238 476 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 GSTO1P78417 241 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 ILDR2Q71H61 639 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 PCDHA4Q9UN74 947 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 BCS1LQ9Y276 419 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 ZEB2O60315 1214 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 TUBB4AP04350 444 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 GGCXP38435 758 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 GUCY2FP51841 1108 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 RASSF7Q02833 373 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 GABPAQ06546 454 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 KIF5AQ12840 1032 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 BRD3Q15059 726 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 TMEM132AQ24JP5 1023 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 WDR59Q6PJI9 974 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 SLC30A10Q6XR72 485 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 ELOA2Q8IYF1 753 aaPredicted RBP10.33□□□□□ -0.76
NDE1-201ENST00000396354 TBCKQ8TEA7 893 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 ATP6V0A2Q9Y487 856 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 CAPN6Q9Y6Q1 641 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 SLX4Q8IY92 1834 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 MYO1CO00159 1063 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 TDP2O95551 362 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 GFPT1Q06210 699 aaPredicted RBP10.33□□□□□ -0.76
NDE1-201ENST00000396354 AMOTL1Q8IY63 956 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 FLAD1Q8NFF5 587 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 NEDD1Q8NHV4 660 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 FAM163AQ96GL9 167 aaPredicted RBP10.33□□□□□ -0.76
NDE1-201ENST00000396354 IFIH1Q9BYX4 1025 aaKnown RBP10.33□□□□□ -0.76
NDE1-201ENST00000396354 DNAJC18Q9H819 358 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 DBNDD1Q9H9R9 158 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 RMND1Q9NWS8 449 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 BARHL2Q9NY43 387 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 CLEC11AQ9Y240 323 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 SAMM50Q9Y512 469 aa10.33□□□□□ -0.76
NDE1-201ENST00000396354 KRT86O43790 486 aa10.32□□□□□ -0.76
NDE1-201ENST00000396354 FTCDO95954 541 aa10.32□□□□□ -0.76
NDE1-201ENST00000396354 PBX1P40424 430 aa10.32□□□□□ -0.76
NDE1-201ENST00000396354 CCDC125Q86Z20 511 aa10.32□□□□□ -0.76
NDE1-201ENST00000396354 SEC63Q9UGP8 760 aaKnown RBP10.32□□□□□ -0.76
NDE1-201ENST00000396354 L1RE1Q9UN81 338 aa10.32□□□□□ -0.76
NDE1-201ENST00000396354 PPP1R11O60927 126 aaPredicted RBP10.32□□□□□ -0.76
NDE1-201ENST00000396354 HMGB2P26583 209 aaKnown RBP10.32□□□□□ -0.76
NDE1-201ENST00000396354 NOVP48745 357 aa10.32□□□□□ -0.76
NDE1-201ENST00000396354 SPAG1Q07617 926 aa10.32□□□□□ -0.76
NDE1-201ENST00000396354 SP8Q8IXZ3 490 aa10.32□□□□□ -0.76
NDE1-201ENST00000396354 REM2Q8IYK8 340 aaPredicted RBP10.32□□□□□ -0.76
NDE1-201ENST00000396354 ADSSL1Q8N142 457 aa10.32□□□□□ -0.76
NDE1-201ENST00000396354 NLGN1Q8N2Q7 840 aa10.32□□□□□ -0.76
NDE1-201ENST00000396354 NUDT12Q9BQG2 462 aa10.32□□□□□ -0.76
NDE1-201ENST00000396354 NAA15Q9BXJ9 866 aaKnown RBP10.32□□□□□ -0.76
NDE1-201ENST00000396354 NPHP3-ACAD11A0A0J9YXS1 232 aa10.31□□□□□ -0.76
NDE1-201ENST00000396354 LGALS16A8MUM7 142 aa10.31□□□□□ -0.76
NDE1-201ENST00000396354 EIF4A3P38919 411 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms