RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 KPNA6O60684 536 aa21.21■□□□□ 0.99
PDLIM7-205ENST00000393551 MMP3P08254 477 aa21.21■□□□□ 0.99
PDLIM7-205ENST00000393551 HOXA13P31271 388 aaPredicted RBP21.21■□□□□ 0.99
PDLIM7-205ENST00000393551 BRDTQ58F21 947 aaPredicted RBP21.21■□□□□ 0.99
PDLIM7-205ENST00000393551 FAM47CQ5HY64 1035 aa21.21■□□□□ 0.99
PDLIM7-205ENST00000393551 HOMER1Q86YM7 354 aa21.21■□□□□ 0.99
PDLIM7-205ENST00000393551 MAFAQ8NHW3 353 aaPredicted RBP21.21■□□□□ 0.99
PDLIM7-205ENST00000393551 CTAGE1Q96RT6 745 aa21.21■□□□□ 0.99
PDLIM7-205ENST00000393551 EIF3JO75822 258 aaKnown RBP21.2■□□□□ 0.98
PDLIM7-205ENST00000393551 GH1P01241 217 aa21.2■□□□□ 0.98
PDLIM7-205ENST00000393551 SUPT20HL2P0C7V6 817 aa21.2■□□□□ 0.98
PDLIM7-205ENST00000393551 WTAPQ15007 396 aa21.2■□□□□ 0.98
PDLIM7-205ENST00000393551 RALYLQ86SE5 291 aaKnown RBP21.2■□□□□ 0.98
PDLIM7-205ENST00000393551 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.2■□□□□ 0.981e-6■□□□□ 9
PDLIM7-205ENST00000393551 IL31RAQ8NI17 732 aa21.2■□□□□ 0.98
PDLIM7-205ENST00000393551 PDCD2LQ9BRP1 358 aa21.2■□□□□ 0.98
PDLIM7-205ENST00000393551 TANC1Q9C0D5 1861 aa21.2■□□□□ 0.98
PDLIM7-205ENST00000393551 TRANK1O15050 2925 aa21.19■□□□□ 0.98
PDLIM7-205ENST00000393551 FOSL2P15408 326 aa21.19■□□□□ 0.98
PDLIM7-205ENST00000393551 SKAP1Q86WV1 359 aa21.19■□□□□ 0.98
PDLIM7-205ENST00000393551 LSG1Q9H089 658 aaKnown RBP21.19■□□□□ 0.98
PDLIM7-205ENST00000393551 ERICH2A1L162 156 aa21.18■□□□□ 0.98
PDLIM7-205ENST00000393551 RBAK-RBAKDNI3L0D1 243 aa21.18■□□□□ 0.98
PDLIM7-205ENST00000393551 PTPN11Q06124 597 aaPredicted RBP21.18■□□□□ 0.98
PDLIM7-205ENST00000393551 TMEM67Q5HYA8 995 aa21.18■□□□□ 0.98
PDLIM7-205ENST00000393551 EMID1Q96A84 441 aaPredicted RBP21.18■□□□□ 0.98
PDLIM7-205ENST00000393551 ZFP91Q96JP5 570 aaPredicted RBP21.18■□□□□ 0.98
PDLIM7-205ENST00000393551 LY9Q9HBG7 655 aa21.18■□□□□ 0.98
PDLIM7-205ENST00000393551 MAP3K20Q9NYL2 800 aaKnown RBP21.18■□□□□ 0.98
PDLIM7-205ENST00000393551 YBX2Q9Y2T7 364 aaKnown RBP21.18■□□□□ 0.98
PDLIM7-205ENST00000393551 PNMA6FA0A0J9YX94 578 aa21.17■□□□□ 0.98
PDLIM7-205ENST00000393551 PGM5Q15124 567 aa21.17■□□□□ 0.98
PDLIM7-205ENST00000393551 VSIG10LQ86VR7 867 aa21.17■□□□□ 0.98
PDLIM7-205ENST00000393551 RPUSD2Q8IZ73 545 aaKnown RBP21.17■□□□□ 0.98
PDLIM7-205ENST00000393551 MYL10Q9BUA6 226 aa21.17■□□□□ 0.98
PDLIM7-205ENST00000393551 IQCF3P0C7M6 154 aa21.16■□□□□ 0.98
PDLIM7-205ENST00000393551 MYCLP12524 364 aaPredicted RBP21.16■□□□□ 0.98
PDLIM7-205ENST00000393551 CHMP4BP1P59074 171 aa21.16■□□□□ 0.98
PDLIM7-205ENST00000393551 SP2Q02086 613 aa21.16■□□□□ 0.98
PDLIM7-205ENST00000393551 SART3Q15020 963 aaKnown RBP21.16■□□□□ 0.98
PDLIM7-205ENST00000393551 GDF6Q6KF10 455 aaPredicted RBP21.16■□□□□ 0.98
PDLIM7-205ENST00000393551 DEFB128Q7Z7B8 93 aa21.16■□□□□ 0.98
PDLIM7-205ENST00000393551 SESTD1Q86VW0 696 aa21.16■□□□□ 0.98
PDLIM7-205ENST00000393551 SAMD3Q8N6K7 520 aa21.16■□□□□ 0.98
PDLIM7-205ENST00000393551 GPKOWQ92917 476 aaPredicted RBP eCLIP21.16■□□□□ 0.98
PDLIM7-205ENST00000393551 MRVI1Q9Y6F6 885 aa21.16■□□□□ 0.98
PDLIM7-205ENST00000393551 PITPNM1O00562 1244 aa21.15■□□□□ 0.98
PDLIM7-205ENST00000393551 CASTP20810 708 aaKnown RBP21.15■□□□□ 0.98
PDLIM7-205ENST00000393551 RABGGTBP53611 331 aa21.15■□□□□ 0.98
PDLIM7-205ENST00000393551 MYSM1Q5VVJ2 828 aa21.15■□□□□ 0.98
PDLIM7-205ENST00000393551 CATIPQ7Z7H3 387 aa21.15■□□□□ 0.98
PDLIM7-205ENST00000393551 USP38Q8NB14 1042 aa21.15■□□□□ 0.98
PDLIM7-205ENST00000393551 PIBF1Q8WXW3 757 aa21.15■□□□□ 0.98
PDLIM7-205ENST00000393551 ESYT1Q9BSJ8 1104 aa21.15■□□□□ 0.98
PDLIM7-205ENST00000393551 COL25A1Q9BXS0 654 aaPredicted RBP21.15■□□□□ 0.98
PDLIM7-205ENST00000393551 MUC3AQ02505 3323 aa21.15■□□□□ 0.98
PDLIM7-205ENST00000393551 DOCK5Q9H7D0 1870 aa21.14■□□□□ 0.97
PDLIM7-205ENST00000393551 GCOM1H8Y6P7 765 aaPredicted RBP21.14■□□□□ 0.97
PDLIM7-205ENST00000393551 SORBS3O60504 671 aa21.14■□□□□ 0.97
PDLIM7-205ENST00000393551 POLR2MP0CAP2 368 aa21.14■□□□□ 0.97
PDLIM7-205ENST00000393551 HOXD8P13378 290 aaPredicted RBP21.14■□□□□ 0.97
PDLIM7-205ENST00000393551 MYOGP15173 224 aa21.14■□□□□ 0.97
PDLIM7-205ENST00000393551 LAMC2Q13753 1193 aa21.14■□□□□ 0.97
PDLIM7-205ENST00000393551 GPNMBQ14956 572 aa21.14■□□□□ 0.97
PDLIM7-205ENST00000393551 PTGISQ16647 500 aa21.14■□□□□ 0.97
PDLIM7-205ENST00000393551 DGKDQ16760 1214 aa21.14■□□□□ 0.97
PDLIM7-205ENST00000393551 FCHSD1Q86WN1 690 aa21.14■□□□□ 0.97
PDLIM7-205ENST00000393551 ZNF654Q8IZM8 581 aa21.14■□□□□ 0.97
PDLIM7-205ENST00000393551 PPTC7Q8NI37 304 aa21.14■□□□□ 0.97
PDLIM7-205ENST00000393551 DHX38Q92620 1227 aaKnown RBP21.14■□□□□ 0.97
PDLIM7-205ENST00000393551 MTIF3Q9H2K0 278 aaKnown RBP21.14■□□□□ 0.97
PDLIM7-205ENST00000393551 NKX2-4Q9H2Z4 354 aa21.14■□□□□ 0.97
PDLIM7-205ENST00000393551 BCAS3Q9H6U6 928 aa21.14■□□□□ 0.97
PDLIM7-205ENST00000393551 SLC4A7Q9Y6M7 1214 aa21.14■□□□□ 0.97
PDLIM7-205ENST00000393551 PTPRSQ13332 1948 aa21.14■□□□□ 0.97
PDLIM7-205ENST00000393551 HAS3O00219 553 aa21.13■□□□□ 0.97
PDLIM7-205ENST00000393551 SLC27A2O14975 620 aa21.13■□□□□ 0.97
PDLIM7-205ENST00000393551 PRC1O43663 620 aa21.13■□□□□ 0.97
PDLIM7-205ENST00000393551 PFKMP08237 780 aa21.13■□□□□ 0.97
PDLIM7-205ENST00000393551 ZNF286BP0CG31 522 aa21.13■□□□□ 0.97
PDLIM7-205ENST00000393551 NECTIN1Q15223 517 aa21.13■□□□□ 0.97
PDLIM7-205ENST00000393551 RAB30Q15771 203 aa21.13■□□□□ 0.97
PDLIM7-205ENST00000393551 HSDL1Q3SXM5 330 aa21.13■□□□□ 0.97
PDLIM7-205ENST00000393551 CELF3Q5SZQ8 465 aaKnown RBP21.13■□□□□ 0.97
PDLIM7-205ENST00000393551 DHX37Q8IY37 1157 aaKnown RBP21.13■□□□□ 0.97
PDLIM7-205ENST00000393551 MAP3K14Q99558 947 aa21.13■□□□□ 0.97
PDLIM7-205ENST00000393551 PRDM12Q9H4Q4 367 aa21.13■□□□□ 0.97
PDLIM7-205ENST00000393551 HDAC6Q9UBN7 1215 aa21.13■□□□□ 0.97
PDLIM7-205ENST00000393551 GTF2IRD1Q9UHL9 959 aa21.13■□□□□ 0.97
PDLIM7-205ENST00000393551 XIRP2A4UGR9 3374 aa21.13■□□□□ 0.97
PDLIM7-205ENST00000393551 FRMPD4Q14CM0 1322 aa21.12■□□□□ 0.97
PDLIM7-205ENST00000393551 SH2B2O14492 632 aaPredicted RBP21.12■□□□□ 0.97
PDLIM7-205ENST00000393551 F2P00734 622 aa21.12■□□□□ 0.97
PDLIM7-205ENST00000393551 UBA1P22314 1058 aaKnown RBP21.12■□□□□ 0.97
PDLIM7-205ENST00000393551 PSEN2P49810 448 aa21.12■□□□□ 0.97
PDLIM7-205ENST00000393551 MRPS9P82933 396 aaKnown RBP21.12■□□□□ 0.97
PDLIM7-205ENST00000393551 ADGRE1Q14246 886 aa21.12■□□□□ 0.97
PDLIM7-205ENST00000393551 HIC1Q14526 733 aa21.12■□□□□ 0.97
PDLIM7-205ENST00000393551 SPZ1Q9BXG8 430 aa21.12■□□□□ 0.97
PDLIM7-205ENST00000393551 MSRAQ9UJ68 235 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms