RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 COL20A1Q9P218 1284 aa27.04■■□□□ 1.92
C9orf47-202ENST00000375850 LAMC2Q13753 1193 aa27.03■■□□□ 1.92
C9orf47-202ENST00000375850 LY6KQ17RY6 165 aa27.03■■□□□ 1.92
C9orf47-202ENST00000375850 KCNV1Q6PIU1 500 aa27.03■■□□□ 1.92
C9orf47-202ENST00000375850 TBC1D5Q92609 795 aa27.03■■□□□ 1.92
C9orf47-202ENST00000375850 SPTBN5Q9NRC6 3674 aaKnown RBP27.02■■□□□ 1.92
C9orf47-202ENST00000375850 GTPBP6O43824 516 aaPredicted RBP27.02■■□□□ 1.92
C9orf47-202ENST00000375850 IGHDP01880 384 aa27.02■■□□□ 1.92
C9orf47-202ENST00000375850 MYOGP15173 224 aa27.02■■□□□ 1.92
C9orf47-202ENST00000375850 RBL2Q08999 1139 aa27.02■■□□□ 1.92
C9orf47-202ENST00000375850 CCDC85BQ15834 202 aaPredicted RBP27.02■■□□□ 1.92
C9orf47-202ENST00000375850 PXMP2Q9NR77 195 aa27.02■■□□□ 1.92
C9orf47-202ENST00000375850 DDX41Q9UJV9 622 aaKnown RBP27.02■■□□□ 1.92
C9orf47-202ENST00000375850 CA3P07451 260 aa27.01■■□□□ 1.91
C9orf47-202ENST00000375850 NR3C2P08235 984 aa27.01■■□□□ 1.91
C9orf47-202ENST00000375850 HSD17B4P51659 736 aa27.01■■□□□ 1.91
C9orf47-202ENST00000375850 AAK1Q2M2I8 961 aa27.01■■□□□ 1.91
C9orf47-202ENST00000375850 VAT1LQ9HCJ6 419 aa27.01■■□□□ 1.91
C9orf47-202ENST00000375850 MRVI1Q9Y6F6 885 aa27.01■■□□□ 1.91
C9orf47-202ENST00000375850 CFBP00751 764 aa27■■□□□ 1.91
C9orf47-202ENST00000375850 SELPP16109 830 aa27■■□□□ 1.91
C9orf47-202ENST00000375850 KCNJ6P48051 423 aa27■■□□□ 1.91
C9orf47-202ENST00000375850 CHMP4BP1P59074 171 aa27■■□□□ 1.91
C9orf47-202ENST00000375850 TRDNQ13061 729 aa27■■□□□ 1.91
C9orf47-202ENST00000375850 HERC6Q8IVU3 1022 aa27■■□□□ 1.91
C9orf47-202ENST00000375850 C7orf31Q8N865 590 aa27■■□□□ 1.91
C9orf47-202ENST00000375850 PPTC7Q8NI37 304 aa27■■□□□ 1.91
C9orf47-202ENST00000375850 KAT2BQ92831 832 aa27■■□□□ 1.91
C9orf47-202ENST00000375850 GTF2IRD1Q9UHL9 959 aa27■■□□□ 1.91
C9orf47-202ENST00000375850 KLRF2D3W0D1 207 aa26.99■■□□□ 1.91
C9orf47-202ENST00000375850 ZBTB5O15062 677 aa26.99■■□□□ 1.91
C9orf47-202ENST00000375850 EIF2AK2P19525 551 aaKnown RBP26.99■■□□□ 1.91
C9orf47-202ENST00000375850 GDF6Q6KF10 455 aaPredicted RBP26.99■■□□□ 1.91
C9orf47-202ENST00000375850 CHST3Q7LGC8 479 aa26.99■■□□□ 1.91
C9orf47-202ENST00000375850 MTMR8Q96EF0 704 aa26.99■■□□□ 1.91
C9orf47-202ENST00000375850 MYO9BQ13459 2157 aa26.98■■□□□ 1.91
C9orf47-202ENST00000375850 EFCAB14O75071 495 aa26.98■■□□□ 1.91
C9orf47-202ENST00000375850 LRRC8DQ7L1W4 858 aa26.98■■□□□ 1.91
C9orf47-202ENST00000375850 DHX37Q8IY37 1157 aaKnown RBP26.98■■□□□ 1.91
C9orf47-202ENST00000375850 ADAMTS19Q8TE59 1207 aa26.98■■□□□ 1.91
C9orf47-202ENST00000375850 F2P00734 622 aa26.97■■□□□ 1.91
C9orf47-202ENST00000375850 SEC23AQ15436 765 aa26.97■■□□□ 1.91
C9orf47-202ENST00000375850 STOX1Q6ZVD7 989 aa26.97■■□□□ 1.91
C9orf47-202ENST00000375850 PCDHA1Q9Y5I3 950 aa26.97■■□□□ 1.91
C9orf47-202ENST00000375850 GBF1Q92538 1859 aa26.97■■□□□ 1.91
C9orf47-202ENST00000375850 TANC1Q9C0D5 1861 aa26.97■■□□□ 1.91
C9orf47-202ENST00000375850 PPFIA4O75335 1185 aa26.96■■□□□ 1.91
C9orf47-202ENST00000375850 TGFB3P10600 412 aa26.96■■□□□ 1.91
C9orf47-202ENST00000375850 HOXD8P13378 290 aaPredicted RBP26.96■■□□□ 1.91
C9orf47-202ENST00000375850 PSEN2P49810 448 aa26.96■■□□□ 1.91
C9orf47-202ENST00000375850 PTK7Q13308 1070 aa26.96■■□□□ 1.91
C9orf47-202ENST00000375850 CNKSR3Q6P9H4 555 aa26.96■■□□□ 1.91
C9orf47-202ENST00000375850 STAG2Q8N3U4 1231 aa26.96■■□□□ 1.91
C9orf47-202ENST00000375850 PPP1R13LQ8WUF5 828 aa26.96■■□□□ 1.91
C9orf47-202ENST00000375850 CTAGE1Q96RT6 745 aa26.96■■□□□ 1.91
C9orf47-202ENST00000375850 PDCD2LQ9BRP1 358 aa26.96■■□□□ 1.91
C9orf47-202ENST00000375850 CHD7Q9P2D1 2997 aa26.96■■□□□ 1.91
C9orf47-202ENST00000375850 PALM3A6NDB9 673 aaPredicted RBP26.95■■□□□ 1.9
C9orf47-202ENST00000375850 HAS3O00219 553 aa26.95■■□□□ 1.9
C9orf47-202ENST00000375850 TLL1O43897 1013 aa26.95■■□□□ 1.9
C9orf47-202ENST00000375850 CXCL10P02778 98 aa26.95■■□□□ 1.9
C9orf47-202ENST00000375850 TAP1Q03518 808 aa26.95■■□□□ 1.9
C9orf47-202ENST00000375850 MFSD10Q14728 455 aa26.95■■□□□ 1.9
C9orf47-202ENST00000375850 MICALL1Q8N3F8 863 aa26.95■■□□□ 1.9
C9orf47-202ENST00000375850 RUFY2Q8WXA3 655 aa26.95■■□□□ 1.9
C9orf47-202ENST00000375850 UHRF1Q96T88 793 aaPredicted RBP26.95■■□□□ 1.9
C9orf47-202ENST00000375850 HDAC6Q9UBN7 1215 aa26.95■■□□□ 1.9
C9orf47-202ENST00000375850 MAD2L2Q9UI95 211 aa26.95■■□□□ 1.9
C9orf47-202ENST00000375850 MTCH2Q9Y6C9 303 aa26.95■■□□□ 1.9
C9orf47-202ENST00000375850 U3KPZ7 1027 aaPredicted RBP26.95■■□□□ 1.9
C9orf47-202ENST00000375850 ABHD14A-ACY1A0A1B0GW23 586 aa26.94■■□□□ 1.9
C9orf47-202ENST00000375850 ERICH2A1L162 156 aa26.94■■□□□ 1.9
C9orf47-202ENST00000375850 OPLAHO14841 1288 aa26.94■■□□□ 1.9
C9orf47-202ENST00000375850 CKBP12277 381 aa26.94■■□□□ 1.9
C9orf47-202ENST00000375850 KIAA0753Q2KHM9 967 aa26.94■■□□□ 1.9
C9orf47-202ENST00000375850 VSIG10LQ86VR7 867 aa26.94■■□□□ 1.9
C9orf47-202ENST00000375850 EXOC6Q8TAG9 804 aa26.94■■□□□ 1.9
C9orf47-202ENST00000375850 COG5Q9UP83 839 aa26.94■■□□□ 1.9
C9orf47-202ENST00000375850 WDR5P61964 334 aaKnown RBP26.93■■□□□ 1.9
C9orf47-202ENST00000375850 DHX38Q92620 1227 aaKnown RBP26.93■■□□□ 1.9
C9orf47-202ENST00000375850 GCOM1H8Y6P7 765 aaPredicted RBP26.92■■□□□ 1.9
C9orf47-202ENST00000375850 POLR2MP0CAP2 368 aa26.92■■□□□ 1.9
C9orf47-202ENST00000375850 MYCLP12524 364 aaPredicted RBP26.92■■□□□ 1.9
C9orf47-202ENST00000375850 SART3Q15020 963 aaKnown RBP26.92■■□□□ 1.9
C9orf47-202ENST00000375850 SKIV2LQ15477 1246 aaKnown RBP26.92■■□□□ 1.9
C9orf47-202ENST00000375850 CELF3Q5SZQ8 465 aaKnown RBP26.92■■□□□ 1.9
C9orf47-202ENST00000375850 MYSM1Q5VVJ2 828 aa26.92■■□□□ 1.9
C9orf47-202ENST00000375850 ARNTL2Q8WYA1 636 aa26.92■■□□□ 1.9
C9orf47-202ENST00000375850 ALG1Q9BT22 464 aa26.92■■□□□ 1.9
C9orf47-202ENST00000375850 RIOX1Q9H6W3 641 aa26.92■■□□□ 1.9
C9orf47-202ENST00000375850 SCN5AQ14524 2016 aa26.92■■□□□ 1.9
C9orf47-202ENST00000375850 PPP1R11O60927 126 aaPredicted RBP26.91■■□□□ 1.9
C9orf47-202ENST00000375850 CCND2P30279 289 aa26.91■■□□□ 1.9
C9orf47-202ENST00000375850 GRM4Q14833 912 aa26.91■■□□□ 1.9
C9orf47-202ENST00000375850 GPNMBQ14956 572 aa26.91■■□□□ 1.9
C9orf47-202ENST00000375850 PGM5Q15124 567 aa26.91■■□□□ 1.9
C9orf47-202ENST00000375850 CYB5R4Q7L1T6 521 aa26.91■■□□□ 1.9
C9orf47-202ENST00000375850 SPATA33Q96N06 139 aa26.91■■□□□ 1.9
C9orf47-202ENST00000375850 ZBED2Q9BTP6 218 aa26.91■■□□□ 1.9
C9orf47-202ENST00000375850 EMSYQ7Z589 1322 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms