RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 UBE4AQ14139 1066 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 CALCRLQ16602 461 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 TCERG1LQ5VWI1 586 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 HAUS3Q68CZ6 603 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 C4orf32Q8N8J7 132 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 LRRC15Q8TF66 581 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 TBC1D5Q92609 795 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 GJA10Q969M2 543 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 MTMR8Q96EF0 704 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 SEMA6BQ9H3T3 888 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 TMEM260Q9NX78 707 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 FRMPD2Q68DX3 1309 aaPredicted RBP9.04□□□□□ -0.96
CD46-208ENST00000367042 PLCH1Q4KWH8 1693 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 BAZ2AQ9UIF9 1905 aaKnown RBP9.04□□□□□ -0.96
CD46-208ENST00000367042 RASSF10A6NK89 507 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 MYO1FO00160 1098 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 GLI1P08151 1106 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 FAM153BP0C7A2 387 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 IFT88Q13099 833 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 MAN2A1Q16706 1144 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 FAM153CQ494X1 144 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 TTMPQ5BVD1 217 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 MIIPQ5JXC2 388 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 SFMBT2Q5VUG0 894 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 KRT79Q5XKE5 535 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 EMBQ6PCB8 327 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 GBP6Q6ZN66 633 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 KIAA0895Q8NCT3 520 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 UBLCP1Q8WVY7 318 aaPredicted RBP9.04□□□□□ -0.96
CD46-208ENST00000367042 SPAG5Q96R06 1193 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 TRIM31Q9BZY9 425 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 CCSER1Q9C0I3 900 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 ATP8A2Q9NTI2 1148 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 FAM153AQ9UHL3 310 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 SALL4Q9UJQ4 1053 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 PLAGL2Q9UPG8 496 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 LTBP4Q8N2S1 1624 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 DISP2A7MBM2 1401 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 ITGB4P16144 1822 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 ECM29Q5VYK3 1845 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 WNK3Q9BYP7 1800 aa9.04□□□□□ -0.96
CD46-208ENST00000367042 CEP104O60308 925 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 GNA11P29992 359 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 CDR1P51861 262 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 PRPF4BQ13523 1007 aaKnown RBP9.03□□□□□ -0.96
CD46-208ENST00000367042 B4GALNT4Q76KP1 1039 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 REXO1Q8N1G1 1221 aaKnown RBP9.03□□□□□ -0.96
CD46-208ENST00000367042 MMGT1Q8N4V1 131 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 FAM133AQ8N9E0 248 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 GLIS3Q8NEA6 775 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 ZNF384Q8TF68 577 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 LARP4BQ92615 738 aaKnown RBP9.03□□□□□ -0.96
CD46-208ENST00000367042 GOLGA6L7A0A1B0GV03 622 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 CYTH3O43739 400 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 ADAMTS2O95450 1211 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 PCP11498 1178 aaKnown RBP9.03□□□□□ -0.96
CD46-208ENST00000367042 NR1D1P20393 614 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 KLHL30Q0D2K2 578 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 TRADDQ15628 312 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 RCSD1Q6JBY9 416 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 KRT25Q7Z3Z0 450 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 OR2W6PQ8NHA6 318 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 COA7Q96BR5 231 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 RNPC3Q96LT9 517 aaKnown RBP9.03□□□□□ -0.96
CD46-208ENST00000367042 PIGSQ96S52 555 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 TTYH3Q9C0H2 523 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 BMP2KQ9NSY1 1161 aaPredicted RBP9.03□□□□□ -0.96
CD46-208ENST00000367042 BARHL2Q9NY43 387 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 LOC102724159A0A0B4J2E5 919 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 LOC102724428A0A0B4J2F2 783 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 MYMKA6NI61 221 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 ORC4O43929 436 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 NTSR2O95665 410 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 MYL1P05976 194 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 LDHBP07195 334 aaKnown RBP9.03□□□□□ -0.96
CD46-208ENST00000367042 SIK1P57059 783 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 PWP2Q15269 919 aaKnown RBP9.03□□□□□ -0.96
CD46-208ENST00000367042 SPTY2D1Q68D10 685 aaPredicted RBP9.03□□□□□ -0.96
CD46-208ENST00000367042 MICALCLQ6ZW33 695 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 SH3RF3Q8TEJ3 882 aaPredicted RBP9.03□□□□□ -0.96
CD46-208ENST00000367042 GPR101Q96P66 508 aaPredicted RBP9.03□□□□□ -0.96
CD46-208ENST00000367042 ERGIC2Q96RQ1 377 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 TMEM47Q9BQJ4 181 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 AP1M1Q9BXS5 423 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 RAB34Q9BZG1 259 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 GOPCQ9HD26 462 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 IL17RBQ9NRM6 502 aa9.03□□□□□ -0.96
CD46-208ENST00000367042 SMIM23A6NLE4 172 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 STXBP3O00186 592 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 ALS2CLQ60I27 953 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 CEP57Q86XR8 500 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 DDX12PQ92771 950 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 KAT2BQ92831 832 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 JPH2Q9BR39 696 aaPredicted RBP9.02□□□□□ -0.97
CD46-208ENST00000367042 GPCPD1Q9NPB8 672 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 MAD2L2Q9UI95 211 aa9.02□□□□□ -0.97
CD46-208ENST00000367042 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.02□□□□□ -0.97
CD46-208ENST00000367042 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.02□□□□□ -0.97
CD46-208ENST00000367042 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.02□□□□□ -0.97
CD46-208ENST00000367042 CHD4Q14839 1912 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms