RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 ZKSCAN8Q15776 578 aaPredicted RBP15.25■□□□□ 0.03
COL6A1-201ENST00000361866 TBC1D10BQ4KMP7 808 aaPredicted RBP15.25■□□□□ 0.03
COL6A1-201ENST00000361866 IQCDQ96DY2 449 aa15.25■□□□□ 0.03
COL6A1-201ENST00000361866 PPP1R12CQ9BZL4 782 aa15.25■□□□□ 0.03
COL6A1-201ENST00000361866 CFBP00751 764 aa15.24■□□□□ 0.03
COL6A1-201ENST00000361866 PEX19P40855 299 aa15.24■□□□□ 0.03
COL6A1-201ENST00000361866 ATP2C1P98194 919 aaPredicted RBP15.24■□□□□ 0.03
COL6A1-201ENST00000361866 UAP1Q16222 522 aaPredicted RBP15.24■□□□□ 0.03
COL6A1-201ENST00000361866 HIBCHQ6NVY1 386 aaPredicted RBP15.24■□□□□ 0.03
COL6A1-201ENST00000361866 STAG2Q8N3U4 1231 aa15.24■□□□□ 0.03
COL6A1-201ENST00000361866 MAP3K14Q99558 947 aa15.24■□□□□ 0.03
COL6A1-201ENST00000361866 PLAAQ9Y263 795 aa15.24■□□□□ 0.03
COL6A1-201ENST00000361866 LRRN2O75325 713 aa15.24■□□□□ 0.03
COL6A1-201ENST00000361866 ANKRD40Q6AI12 368 aa15.24■□□□□ 0.03
COL6A1-201ENST00000361866 SYCE1Q8N0S2 351 aa15.24■□□□□ 0.03
COL6A1-201ENST00000361866 UBL4BQ8N7F7 174 aa15.24■□□□□ 0.03
COL6A1-201ENST00000361866 NT5C3AQ9H0P0 336 aa15.24■□□□□ 0.03
COL6A1-201ENST00000361866 RAB17Q9H0T7 212 aa15.24■□□□□ 0.03
COL6A1-201ENST00000361866 COL4A3BPQ9Y5P4 624 aa15.24■□□□□ 0.03
COL6A1-201ENST00000361866 WDR17Q8IZU2 1322 aa15.24■□□□□ 0.03
COL6A1-201ENST00000361866 LOC102724428A0A0B4J2F2 783 aa15.24■□□□□ 0.03
COL6A1-201ENST00000361866 PCK1P35558 622 aa15.24■□□□□ 0.03
COL6A1-201ENST00000361866 IL6STP40189 918 aaPredicted RBP15.24■□□□□ 0.03
COL6A1-201ENST00000361866 SIK1P57059 783 aa15.24■□□□□ 0.03
COL6A1-201ENST00000361866 UBE2SQ16763 222 aa15.24■□□□□ 0.03
COL6A1-201ENST00000361866 DPP8Q6V1X1 898 aaPredicted RBP15.24■□□□□ 0.03
COL6A1-201ENST00000361866 TMEM51Q9NW97 253 aa15.24■□□□□ 0.03
COL6A1-201ENST00000361866 LCMT1Q9UIC8 334 aa15.24■□□□□ 0.03
COL6A1-201ENST00000361866 NEBLO76041 1014 aa15.23■□□□□ 0.03
COL6A1-201ENST00000361866 ERFEQ4G0M1 354 aa15.23■□□□□ 0.03
COL6A1-201ENST00000361866 ALX1Q15699 326 aa15.23■□□□□ 0.03
COL6A1-201ENST00000361866 PFKFB3Q16875 520 aaPredicted RBP15.23■□□□□ 0.03
COL6A1-201ENST00000361866 ALS2CLQ60I27 953 aa15.23■□□□□ 0.03
COL6A1-201ENST00000361866 FOXR1Q6PIV2 292 aa15.23■□□□□ 0.03
COL6A1-201ENST00000361866 CNBD1Q8NA66 436 aa15.23■□□□□ 0.03
COL6A1-201ENST00000361866 GPR101Q96P66 508 aaPredicted RBP15.23■□□□□ 0.03
COL6A1-201ENST00000361866 AGXT2Q9BYV1 514 aa15.23■□□□□ 0.03
COL6A1-201ENST00000361866 USTQ9Y2C2 406 aa15.23■□□□□ 0.03
COL6A1-201ENST00000361866 BTDP43251 543 aa15.23■□□□□ 0.03
COL6A1-201ENST00000361866 GTF2IP78347 998 aa15.23■□□□□ 0.03
COL6A1-201ENST00000361866 MXRA7P84157 204 aa15.23■□□□□ 0.03
COL6A1-201ENST00000361866 STK4Q13043 487 aa15.23■□□□□ 0.03
COL6A1-201ENST00000361866 MCTP2Q6DN12 878 aa15.23■□□□□ 0.03
COL6A1-201ENST00000361866 ZNF365Q70YC5 407 aa15.23■□□□□ 0.03
COL6A1-201ENST00000361866 DDX47Q9H0S4 455 aaKnown RBP15.23■□□□□ 0.03
COL6A1-201ENST00000361866 LIMA1Q9UHB6 759 aaKnown RBP15.23■□□□□ 0.03
COL6A1-201ENST00000361866 GFPT2O94808 682 aa15.22■□□□□ 0.03
COL6A1-201ENST00000361866 FAM133BQ5BKY9 247 aaKnown RBP15.22■□□□□ 0.03
COL6A1-201ENST00000361866 AK8Q96MA6 479 aa15.22■□□□□ 0.03
COL6A1-201ENST00000361866 CUEDC2Q9H467 287 aa15.22■□□□□ 0.03
COL6A1-201ENST00000361866 INTS9Q9NV88 658 aaKnown RBP15.22■□□□□ 0.03
COL6A1-201ENST00000361866 ODF2LQ9ULJ1 636 aa15.22■□□□□ 0.03
COL6A1-201ENST00000361866 ANO9A1A5B4 782 aa15.22■□□□□ 0.03
COL6A1-201ENST00000361866 PPP1R3GB7ZBB8 358 aa15.22■□□□□ 0.03
COL6A1-201ENST00000361866 ALKBH5Q6P6C2 394 aaKnown RBP15.22■□□□□ 0.03
COL6A1-201ENST00000361866 CCNI2Q6ZMN8 369 aaPredicted RBP15.22■□□□□ 0.03
COL6A1-201ENST00000361866 MARCH10Q8NA82 808 aaPredicted RBP15.22■□□□□ 0.03
COL6A1-201ENST00000361866 DDX12PQ92771 950 aa15.22■□□□□ 0.03
COL6A1-201ENST00000361866 LACRTQ9GZZ8 138 aa15.22■□□□□ 0.03
COL6A1-201ENST00000361866 HOMER2Q9NSB8 354 aa15.22■□□□□ 0.03
COL6A1-201ENST00000361866 HPCAL4Q9UM19 191 aa15.22■□□□□ 0.03
COL6A1-201ENST00000361866 CAPN11Q9UMQ6 739 aa15.22■□□□□ 0.03
COL6A1-201ENST00000361866 PGRMC1O00264 195 aaKnown RBP15.22■□□□□ 0.03
COL6A1-201ENST00000361866 CLGNO14967 610 aa15.22■□□□□ 0.03
COL6A1-201ENST00000361866 SNCBQ16143 134 aa15.22■□□□□ 0.03
COL6A1-201ENST00000361866 CCDC93Q567U6 631 aa15.22■□□□□ 0.03
COL6A1-201ENST00000361866 MAGOHBQ96A72 148 aaKnown RBP15.22■□□□□ 0.03
COL6A1-201ENST00000361866 CARD10Q9BWT7 1032 aa15.22■□□□□ 0.03
COL6A1-201ENST00000361866 ANKZF1Q9H8Y5 726 aa15.22■□□□□ 0.03
COL6A1-201ENST00000361866 CCDC169A6NNP5 214 aa15.22■□□□□ 0.03
COL6A1-201ENST00000361866 GNA14O95837 355 aa15.22■□□□□ 0.03
COL6A1-201ENST00000361866 PLEKP08567 350 aaPredicted RBP15.22■□□□□ 0.03
COL6A1-201ENST00000361866 GALNT17Q6IS24 598 aa15.22■□□□□ 0.03
COL6A1-201ENST00000361866 FAM212AQ96EL1 285 aa15.22■□□□□ 0.03
COL6A1-201ENST00000361866 ZNF804BA4D1E1 1349 aa15.21■□□□□ 0.03
COL6A1-201ENST00000361866 ATP11AP98196 1134 aa15.21■□□□□ 0.03
COL6A1-201ENST00000361866 APBA1Q02410 837 aa15.21■□□□□ 0.03
COL6A1-201ENST00000361866 MESDQ14696 234 aa15.21■□□□□ 0.03
COL6A1-201ENST00000361866 MUM1L1Q5H9M0 696 aa15.21■□□□□ 0.03
COL6A1-201ENST00000361866 TRIM68Q6AZZ1 485 aa15.21■□□□□ 0.03
COL6A1-201ENST00000361866 IFT74Q96LB3 600 aa15.21■□□□□ 0.03
COL6A1-201ENST00000361866 TCHPQ9BT92 498 aa15.21■□□□□ 0.03
COL6A1-201ENST00000361866 CDCA7Q9BWT1 371 aaPredicted RBP15.21■□□□□ 0.03
COL6A1-201ENST00000361866 IQCGQ9H095 443 aaKnown RBP15.21■□□□□ 0.03
COL6A1-201ENST00000361866 EHMT1Q9H9B1 1298 aa15.21■□□□□ 0.03
COL6A1-201ENST00000361866 DNAJC17Q9NVM6 304 aaKnown RBP15.21■□□□□ 0.03
COL6A1-201ENST00000361866 ARHGEF28Q8N1W1 1705 aaKnown RBP15.21■□□□□ 0.03
COL6A1-201ENST00000361866 PTPRUQ92729 1446 aa15.21■□□□□ 0.03
COL6A1-201ENST00000361866 ZRANB2O95218 330 aaKnown RBP eCLIP15.21■□□□□ 0.03
COL6A1-201ENST00000361866 BMP6P22004 513 aa15.21■□□□□ 0.03
COL6A1-201ENST00000361866 STX2P32856 288 aa15.21■□□□□ 0.03
COL6A1-201ENST00000361866 IRAK1P51617 712 aa15.21■□□□□ 0.03
COL6A1-201ENST00000361866 KCTD1Q719H9 257 aa15.21■□□□□ 0.03
COL6A1-201ENST00000361866 RSRC2Q7L4I2 434 aaKnown RBP15.21■□□□□ 0.03
COL6A1-201ENST00000361866 TAOK1Q7L7X3 1001 aa15.21■□□□□ 0.03
COL6A1-201ENST00000361866 DCP1AQ9NPI6 582 aaPredicted RBP15.21■□□□□ 0.03
COL6A1-201ENST00000361866 SNX12Q9UMY4 172 aa15.21■□□□□ 0.03
COL6A1-201ENST00000361866 COL15A1P39059 1388 aa15.21■□□□□ 0.03
COL6A1-201ENST00000361866 PCP11498 1178 aaKnown RBP15.21■□□□□ 0.02
COL6A1-201ENST00000361866 HARSP12081 509 aaKnown RBP15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms