RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 XPO4Q9C0E2 1151 aaKnown RBP5.73□□□□□ -1.49
ATXN3-202ENST00000359366 NAT10Q9H0A0 1025 aaKnown RBP5.73□□□□□ -1.49
ATXN3-202ENST00000359366 SPON1Q9HCB6 807 aa5.73□□□□□ -1.49
ATXN3-202ENST00000359366 CCDC39Q9UFE4 941 aa5.73□□□□□ -1.49
ATXN3-202ENST00000359366 PYCARDQ9ULZ3 195 aa5.73□□□□□ -1.49
ATXN3-202ENST00000359366 GDAQ9Y2T3 454 aa5.73□□□□□ -1.49
ATXN3-202ENST00000359366 TMX2Q9Y320 296 aa5.73□□□□□ -1.49
ATXN3-202ENST00000359366 ATAD5Q96QE3 1844 aa5.73□□□□□ -1.49
ATXN3-202ENST00000359366 MSNP26038 577 aaKnown RBP5.72□□□□□ -1.49
ATXN3-202ENST00000359366 LONP1P36776 959 aaKnown RBP5.72□□□□□ -1.49
ATXN3-202ENST00000359366 SARSP49591 514 aaKnown RBP5.72□□□□□ -1.49
ATXN3-202ENST00000359366 CLK2P49760 499 aaKnown RBP5.72□□□□□ -1.49
ATXN3-202ENST00000359366 MRPL12P52815 198 aaKnown RBP5.72□□□□□ -1.49
ATXN3-202ENST00000359366 MTMR2Q13614 643 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 MORC3Q14149 939 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 ECM1Q16610 540 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 PRR16Q569H4 304 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 RRAGBQ5VZM2 374 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 KCNK18Q7Z418 384 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 CABP7Q86V35 215 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 CREBRFQ8IUR6 639 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 IQUBQ8NA54 791 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 HAS1Q92839 578 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 PURBQ96QR8 312 aaKnown RBP5.72□□□□□ -1.49
ATXN3-202ENST00000359366 AMNQ9BXJ7 453 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 ANO3Q9BYT9 981 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 VPS33BQ9H267 617 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 PRDM16Q9HAZ2 1276 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 POLD4Q9HCU8 107 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 GOPCQ9HD26 462 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 DISC1Q9NRI5 854 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 SAMSN1Q9NSI8 373 aaKnown RBP5.72□□□□□ -1.49
ATXN3-202ENST00000359366 RNF181Q9P0P0 153 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 DDX25Q9UHL0 483 aaKnown RBP5.72□□□□□ -1.49
ATXN3-202ENST00000359366 ESYT2A0FGR8 921 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 MARCH6O60337 910 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 CALRP27797 417 aaKnown RBP5.72□□□□□ -1.49
ATXN3-202ENST00000359366 RAD51AP2Q09MP3 1159 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 SPP2Q13103 211 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 ARL6IP4Q66PJ3 421 aaKnown RBP5.72□□□□□ -1.49
ATXN3-202ENST00000359366 SH3RF1Q7Z6J0 888 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 MTMR9Q96QG7 549 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 WRNIP1Q96S55 665 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 TANGO6Q9C0B7 1094 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 VCPKMTQ9H867 229 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 CTNND2Q9UQB3 1225 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 ZKSCAN5Q9Y2L8 839 aa5.72□□□□□ -1.49
ATXN3-202ENST00000359366 ADM5C9JUS6 153 aa5.71□□□□□ -1.49
ATXN3-202ENST00000359366 FAM86B1E9PN63 330 aa5.71□□□□□ -1.49
ATXN3-202ENST00000359366 H7C1D1 291 aa5.71□□□□□ -1.49
ATXN3-202ENST00000359366 FAM86B2P0C5J1 330 aa5.71□□□□□ -1.49
ATXN3-202ENST00000359366 TXLNAP40222 546 aa5.71□□□□□ -1.49
ATXN3-202ENST00000359366 FANCCQ00597 558 aa5.71□□□□□ -1.49
ATXN3-202ENST00000359366 MYL5Q02045 173 aa5.71□□□□□ -1.49
ATXN3-202ENST00000359366 MCM6Q14566 821 aa5.71□□□□□ -1.49
ATXN3-202ENST00000359366 FKBP1CQ5VVH2 108 aa5.71□□□□□ -1.49
ATXN3-202ENST00000359366 BANK1Q8NDB2 785 aa5.71□□□□□ -1.49
ATXN3-202ENST00000359366 SYT17Q9BSW7 474 aa5.71□□□□□ -1.49
ATXN3-202ENST00000359366 GPRC5DQ9NZD1 345 aa5.71□□□□□ -1.49
ATXN3-202ENST00000359366 PKD2L1Q9P0L9 805 aa5.71□□□□□ -1.49
ATXN3-202ENST00000359366 LRWD1Q9UFC0 647 aa5.71□□□□□ -1.49
ATXN3-202ENST00000359366 HOOK1Q9UJC3 728 aaKnown RBP5.71□□□□□ -1.49
ATXN3-202ENST00000359366 NFE2L3Q9Y4A8 694 aa5.71□□□□□ -1.49
ATXN3-202ENST00000359366 SBF1O95248 1867 aa5.71□□□□□ -1.5
ATXN3-202ENST00000359366 COL2A1P02458 1487 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-202ENST00000359366 DNAH12Q6ZR08 3092 aa5.71□□□□□ -1.5
ATXN3-202ENST00000359366 TRIM49BA6NDI0 452 aa5.71□□□□□ -1.5
ATXN3-202ENST00000359366 MEIS1O00470 390 aa5.71□□□□□ -1.5
ATXN3-202ENST00000359366 SERPINC1P01008 464 aa5.71□□□□□ -1.5
ATXN3-202ENST00000359366 SSBP05455 408 aaKnown RBP eCLIP5.71□□□□□ -1.5
ATXN3-202ENST00000359366 ASNSP08243 561 aa5.71□□□□□ -1.5
ATXN3-202ENST00000359366 LMNB1P20700 586 aa5.71□□□□□ -1.5
ATXN3-202ENST00000359366 RPS12P25398 132 aaKnown RBP5.71□□□□□ -1.5
ATXN3-202ENST00000359366 ARHGAP4P98171 946 aa5.71□□□□□ -1.5
ATXN3-202ENST00000359366 NT5DC1Q5TFE4 455 aa5.71□□□□□ -1.5
ATXN3-202ENST00000359366 MOB2Q70IA6 237 aa5.71□□□□□ -1.5
ATXN3-202ENST00000359366 DYMQ7RTS9 669 aa5.71□□□□□ -1.5
ATXN3-202ENST00000359366 TMC6Q7Z403 805 aa5.71□□□□□ -1.5
ATXN3-202ENST00000359366 CACTINQ8WUQ7 758 aaKnown RBP5.71□□□□□ -1.5
ATXN3-202ENST00000359366 RAVER2Q9HCJ3 691 aaKnown RBP5.71□□□□□ -1.5
ATXN3-202ENST00000359366 SH3BP1Q9Y3L3 701 aa5.71□□□□□ -1.5
ATXN3-202ENST00000359366 ZHX2Q9Y6X8 837 aa5.71□□□□□ -1.5
ATXN3-202ENST00000359366 NPHP3-ACAD11A0A0J9YXS1 232 aa5.7□□□□□ -1.5
ATXN3-202ENST00000359366 SPDYE3A6NKU9 549 aa5.7□□□□□ -1.5
ATXN3-202ENST00000359366 PPP1R3GB7ZBB8 358 aa5.7□□□□□ -1.5
ATXN3-202ENST00000359366 NFIBO00712 420 aa5.7□□□□□ -1.5
ATXN3-202ENST00000359366 TBC1D12O60347 775 aa5.7□□□□□ -1.5
ATXN3-202ENST00000359366 FLOT1O75955 427 aa5.7□□□□□ -1.5
ATXN3-202ENST00000359366 RPN1P04843 607 aaKnown RBP5.7□□□□□ -1.5
ATXN3-202ENST00000359366 FCER1AP12319 257 aa5.7□□□□□ -1.5
ATXN3-202ENST00000359366 VCAM1P19320 739 aa5.7□□□□□ -1.5
ATXN3-202ENST00000359366 ERCC3P19447 782 aa5.7□□□□□ -1.5
ATXN3-202ENST00000359366 PMS1P54277 932 aaKnown RBP5.7□□□□□ -1.5
ATXN3-202ENST00000359366 HMGCS2P54868 508 aa5.7□□□□□ -1.5
ATXN3-202ENST00000359366 MAP2K1Q02750 393 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-202ENST00000359366 GRB10Q13322 594 aa5.7□□□□□ -1.5
ATXN3-202ENST00000359366 TNFAIP1Q13829 316 aa5.7□□□□□ -1.5
ATXN3-202ENST00000359366 KMT5BQ4FZB7 885 aa5.7□□□□□ -1.5
ATXN3-202ENST00000359366 PPP1R18Q6NYC8 613 aa5.7□□□□□ -1.5
ATXN3-202ENST00000359366 TRMT1LQ7Z2T5 733 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms